GO Enrichment Analysis of Co-expressed Genes with
AT4G18760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009606: tropism | 0.00E+00 |
| 2 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 3 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 4 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 5 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 6 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 7 | GO:0042255: ribosome assembly | 6.94E-05 |
| 8 | GO:0006353: DNA-templated transcription, termination | 6.94E-05 |
| 9 | GO:1903866: palisade mesophyll development | 1.14E-04 |
| 10 | GO:0043971: histone H3-K18 acetylation | 1.14E-04 |
| 11 | GO:0048829: root cap development | 1.55E-04 |
| 12 | GO:1900033: negative regulation of trichome patterning | 2.65E-04 |
| 13 | GO:0080009: mRNA methylation | 2.65E-04 |
| 14 | GO:0018022: peptidyl-lysine methylation | 2.65E-04 |
| 15 | GO:0010569: regulation of double-strand break repair via homologous recombination | 2.65E-04 |
| 16 | GO:0009734: auxin-activated signaling pathway | 2.73E-04 |
| 17 | GO:0080188: RNA-directed DNA methylation | 3.08E-04 |
| 18 | GO:0009658: chloroplast organization | 3.50E-04 |
| 19 | GO:0009416: response to light stimulus | 4.20E-04 |
| 20 | GO:0090391: granum assembly | 4.38E-04 |
| 21 | GO:0030029: actin filament-based process | 4.38E-04 |
| 22 | GO:0003333: amino acid transmembrane transport | 4.64E-04 |
| 23 | GO:0009800: cinnamic acid biosynthetic process | 6.29E-04 |
| 24 | GO:0006168: adenine salvage | 6.29E-04 |
| 25 | GO:0006166: purine ribonucleoside salvage | 6.29E-04 |
| 26 | GO:0048629: trichome patterning | 8.35E-04 |
| 27 | GO:0044209: AMP salvage | 1.05E-03 |
| 28 | GO:0006559: L-phenylalanine catabolic process | 1.29E-03 |
| 29 | GO:0035435: phosphate ion transmembrane transport | 1.29E-03 |
| 30 | GO:0042793: transcription from plastid promoter | 1.29E-03 |
| 31 | GO:0010315: auxin efflux | 1.29E-03 |
| 32 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.54E-03 |
| 33 | GO:0000911: cytokinesis by cell plate formation | 1.54E-03 |
| 34 | GO:0010103: stomatal complex morphogenesis | 1.81E-03 |
| 35 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 1.81E-03 |
| 36 | GO:0006865: amino acid transport | 2.04E-03 |
| 37 | GO:0048766: root hair initiation | 2.09E-03 |
| 38 | GO:0007389: pattern specification process | 2.39E-03 |
| 39 | GO:0044030: regulation of DNA methylation | 2.39E-03 |
| 40 | GO:0009880: embryonic pattern specification | 2.39E-03 |
| 41 | GO:0007186: G-protein coupled receptor signaling pathway | 2.39E-03 |
| 42 | GO:0030001: metal ion transport | 2.42E-03 |
| 43 | GO:0000373: Group II intron splicing | 2.70E-03 |
| 44 | GO:0048589: developmental growth | 2.70E-03 |
| 45 | GO:0006349: regulation of gene expression by genetic imprinting | 3.02E-03 |
| 46 | GO:0016571: histone methylation | 3.02E-03 |
| 47 | GO:0016573: histone acetylation | 3.02E-03 |
| 48 | GO:0031627: telomeric loop formation | 3.36E-03 |
| 49 | GO:0010048: vernalization response | 3.36E-03 |
| 50 | GO:0046856: phosphatidylinositol dephosphorylation | 3.71E-03 |
| 51 | GO:0010152: pollen maturation | 4.06E-03 |
| 52 | GO:0010102: lateral root morphogenesis | 4.43E-03 |
| 53 | GO:0010588: cotyledon vascular tissue pattern formation | 4.43E-03 |
| 54 | GO:0009266: response to temperature stimulus | 4.81E-03 |
| 55 | GO:0010020: chloroplast fission | 4.81E-03 |
| 56 | GO:0048364: root development | 5.12E-03 |
| 57 | GO:0006338: chromatin remodeling | 6.03E-03 |
| 58 | GO:0080147: root hair cell development | 6.03E-03 |
| 59 | GO:2000377: regulation of reactive oxygen species metabolic process | 6.03E-03 |
| 60 | GO:0006825: copper ion transport | 6.45E-03 |
| 61 | GO:0006874: cellular calcium ion homeostasis | 6.45E-03 |
| 62 | GO:0009733: response to auxin | 7.28E-03 |
| 63 | GO:0010082: regulation of root meristem growth | 7.79E-03 |
| 64 | GO:0048443: stamen development | 8.26E-03 |
| 65 | GO:0010051: xylem and phloem pattern formation | 9.23E-03 |
| 66 | GO:0010305: leaf vascular tissue pattern formation | 9.73E-03 |
| 67 | GO:0009958: positive gravitropism | 9.73E-03 |
| 68 | GO:0009960: endosperm development | 9.73E-03 |
| 69 | GO:0071472: cellular response to salt stress | 9.73E-03 |
| 70 | GO:0007018: microtubule-based movement | 1.02E-02 |
| 71 | GO:0008380: RNA splicing | 1.08E-02 |
| 72 | GO:0002229: defense response to oomycetes | 1.13E-02 |
| 73 | GO:0080156: mitochondrial mRNA modification | 1.13E-02 |
| 74 | GO:0032502: developmental process | 1.18E-02 |
| 75 | GO:0009630: gravitropism | 1.18E-02 |
| 76 | GO:0010090: trichome morphogenesis | 1.24E-02 |
| 77 | GO:0010252: auxin homeostasis | 1.29E-02 |
| 78 | GO:0010027: thylakoid membrane organization | 1.46E-02 |
| 79 | GO:0048481: plant ovule development | 1.77E-02 |
| 80 | GO:0048767: root hair elongation | 1.83E-02 |
| 81 | GO:0006811: ion transport | 1.89E-02 |
| 82 | GO:0009910: negative regulation of flower development | 1.96E-02 |
| 83 | GO:0000724: double-strand break repair via homologous recombination | 2.02E-02 |
| 84 | GO:0008283: cell proliferation | 2.50E-02 |
| 85 | GO:0009926: auxin polar transport | 2.50E-02 |
| 86 | GO:0006397: mRNA processing | 2.67E-02 |
| 87 | GO:0009965: leaf morphogenesis | 2.72E-02 |
| 88 | GO:0006857: oligopeptide transport | 3.25E-02 |
| 89 | GO:0048367: shoot system development | 3.57E-02 |
| 90 | GO:0006355: regulation of transcription, DNA-templated | 3.78E-02 |
| 91 | GO:0016569: covalent chromatin modification | 3.81E-02 |
| 92 | GO:0009553: embryo sac development | 3.89E-02 |
| 93 | GO:0009624: response to nematode | 3.98E-02 |
| 94 | GO:0051726: regulation of cell cycle | 4.14E-02 |
| 95 | GO:0009611: response to wounding | 4.63E-02 |
| 96 | GO:0009058: biosynthetic process | 4.84E-02 |
| 97 | GO:0006468: protein phosphorylation | 4.86E-02 |
| 98 | GO:0009845: seed germination | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003727: single-stranded RNA binding | 2.77E-05 |
| 2 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.14E-04 |
| 3 | GO:0004016: adenylate cyclase activity | 1.14E-04 |
| 4 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.14E-04 |
| 5 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 2.65E-04 |
| 6 | GO:0070181: small ribosomal subunit rRNA binding | 4.38E-04 |
| 7 | GO:0045548: phenylalanine ammonia-lyase activity | 4.38E-04 |
| 8 | GO:0003999: adenine phosphoribosyltransferase activity | 6.29E-04 |
| 9 | GO:0004930: G-protein coupled receptor activity | 8.35E-04 |
| 10 | GO:0016279: protein-lysine N-methyltransferase activity | 8.35E-04 |
| 11 | GO:0010011: auxin binding | 8.35E-04 |
| 12 | GO:0010328: auxin influx transmembrane transporter activity | 8.35E-04 |
| 13 | GO:0010385: double-stranded methylated DNA binding | 8.35E-04 |
| 14 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.29E-03 |
| 15 | GO:0009378: four-way junction helicase activity | 1.29E-03 |
| 16 | GO:0043140: ATP-dependent 3'-5' DNA helicase activity | 1.29E-03 |
| 17 | GO:0009672: auxin:proton symporter activity | 3.02E-03 |
| 18 | GO:0015293: symporter activity | 3.07E-03 |
| 19 | GO:0004713: protein tyrosine kinase activity | 3.36E-03 |
| 20 | GO:0003691: double-stranded telomeric DNA binding | 3.71E-03 |
| 21 | GO:0003690: double-stranded DNA binding | 3.80E-03 |
| 22 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 4.06E-03 |
| 23 | GO:0015171: amino acid transmembrane transporter activity | 4.06E-03 |
| 24 | GO:0010329: auxin efflux transmembrane transporter activity | 4.43E-03 |
| 25 | GO:0015114: phosphate ion transmembrane transporter activity | 4.43E-03 |
| 26 | GO:0005217: intracellular ligand-gated ion channel activity | 5.21E-03 |
| 27 | GO:0004970: ionotropic glutamate receptor activity | 5.21E-03 |
| 28 | GO:0019843: rRNA binding | 6.52E-03 |
| 29 | GO:0005215: transporter activity | 7.11E-03 |
| 30 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 7.43E-03 |
| 31 | GO:0004674: protein serine/threonine kinase activity | 7.74E-03 |
| 32 | GO:0018024: histone-lysine N-methyltransferase activity | 8.74E-03 |
| 33 | GO:0004402: histone acetyltransferase activity | 9.23E-03 |
| 34 | GO:0008080: N-acetyltransferase activity | 9.73E-03 |
| 35 | GO:0001085: RNA polymerase II transcription factor binding | 9.73E-03 |
| 36 | GO:0019901: protein kinase binding | 1.08E-02 |
| 37 | GO:0048038: quinone binding | 1.13E-02 |
| 38 | GO:0005200: structural constituent of cytoskeleton | 1.35E-02 |
| 39 | GO:0008375: acetylglucosaminyltransferase activity | 1.58E-02 |
| 40 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.89E-02 |
| 41 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.96E-02 |
| 42 | GO:0003697: single-stranded DNA binding | 2.09E-02 |
| 43 | GO:0004871: signal transducer activity | 2.18E-02 |
| 44 | GO:0042393: histone binding | 2.29E-02 |
| 45 | GO:0016298: lipase activity | 3.17E-02 |
| 46 | GO:0003777: microtubule motor activity | 3.33E-02 |
| 47 | GO:0004650: polygalacturonase activity | 3.73E-02 |
| 48 | GO:0016874: ligase activity | 3.81E-02 |
| 49 | GO:0016887: ATPase activity | 3.96E-02 |
| 50 | GO:0004386: helicase activity | 4.23E-02 |
| 51 | GO:0003723: RNA binding | 4.93E-02 |
| 52 | GO:0016829: lyase activity | 4.93E-02 |
| 53 | GO:0003676: nucleic acid binding | 4.98E-02 |