Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G18570

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901698: response to nitrogen compound0.00E+00
2GO:0009606: tropism0.00E+00
3GO:0090322: regulation of superoxide metabolic process0.00E+00
4GO:0007638: mechanosensory behavior0.00E+00
5GO:1903224: regulation of endodermal cell differentiation0.00E+00
6GO:0097164: ammonium ion metabolic process0.00E+00
7GO:0010480: microsporocyte differentiation0.00E+00
8GO:0045184: establishment of protein localization0.00E+00
9GO:0015843: methylammonium transport0.00E+00
10GO:0031222: arabinan catabolic process0.00E+00
11GO:0042794: rRNA transcription from plastid promoter0.00E+00
12GO:0018131: oxazole or thiazole biosynthetic process0.00E+00
13GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.17E-08
14GO:0006468: protein phosphorylation5.51E-05
15GO:2000038: regulation of stomatal complex development8.11E-05
16GO:0042793: transcription from plastid promoter1.82E-04
17GO:0048437: floral organ development3.19E-04
18GO:0034972: histone H3-R26 methylation3.63E-04
19GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic3.63E-04
20GO:0070509: calcium ion import3.63E-04
21GO:0090558: plant epidermis development3.63E-04
22GO:1903866: palisade mesophyll development3.63E-04
23GO:0034971: histone H3-R17 methylation3.63E-04
24GO:0035987: endodermal cell differentiation3.63E-04
25GO:0006436: tryptophanyl-tRNA aminoacylation3.63E-04
26GO:0010342: endosperm cellularization3.63E-04
27GO:0034757: negative regulation of iron ion transport3.63E-04
28GO:0048016: inositol phosphate-mediated signaling3.63E-04
29GO:0034970: histone H3-R2 methylation3.63E-04
30GO:0042659: regulation of cell fate specification3.63E-04
31GO:0046620: regulation of organ growth4.01E-04
32GO:0007389: pattern specification process4.91E-04
33GO:0010252: auxin homeostasis7.11E-04
34GO:0070981: L-asparagine biosynthetic process7.89E-04
35GO:0010271: regulation of chlorophyll catabolic process7.89E-04
36GO:0010434: bract formation7.89E-04
37GO:0009662: etioplast organization7.89E-04
38GO:0048439: flower morphogenesis7.89E-04
39GO:0080009: mRNA methylation7.89E-04
40GO:0009786: regulation of asymmetric cell division7.89E-04
41GO:0006529: asparagine biosynthetic process7.89E-04
42GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine7.89E-04
43GO:2000123: positive regulation of stomatal complex development7.89E-04
44GO:0010254: nectary development7.89E-04
45GO:0030422: production of siRNA involved in RNA interference8.10E-04
46GO:0048229: gametophyte development9.32E-04
47GO:0010075: regulation of meristem growth1.20E-03
48GO:0009767: photosynthetic electron transport chain1.20E-03
49GO:0009733: response to auxin1.25E-03
50GO:0080117: secondary growth1.28E-03
51GO:0090391: granum assembly1.28E-03
52GO:0010589: leaf proximal/distal pattern formation1.28E-03
53GO:0042780: tRNA 3'-end processing1.28E-03
54GO:0071705: nitrogen compound transport1.28E-03
55GO:0001578: microtubule bundle formation1.28E-03
56GO:0009954: proximal/distal pattern formation1.28E-03
57GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.28E-03
58GO:0090708: specification of plant organ axis polarity1.28E-03
59GO:0000160: phosphorelay signal transduction system1.31E-03
60GO:0009934: regulation of meristem structural organization1.36E-03
61GO:0009734: auxin-activated signaling pathway1.42E-03
62GO:0070588: calcium ion transmembrane transport1.52E-03
63GO:0019048: modulation by virus of host morphology or physiology1.84E-03
64GO:0015696: ammonium transport1.84E-03
65GO:0046739: transport of virus in multicellular host1.84E-03
66GO:2000904: regulation of starch metabolic process1.84E-03
67GO:0031048: chromatin silencing by small RNA1.84E-03
68GO:0051289: protein homotetramerization1.84E-03
69GO:1902476: chloride transmembrane transport1.84E-03
70GO:0007231: osmosensory signaling pathway1.84E-03
71GO:0044211: CTP salvage1.84E-03
72GO:0009944: polarity specification of adaxial/abaxial axis1.87E-03
73GO:0006418: tRNA aminoacylation for protein translation2.07E-03
74GO:0006306: DNA methylation2.27E-03
75GO:0009926: auxin polar transport2.30E-03
76GO:0000914: phragmoplast assembly2.47E-03
77GO:0030104: water homeostasis2.47E-03
78GO:0033500: carbohydrate homeostasis2.47E-03
79GO:0046656: folic acid biosynthetic process2.47E-03
80GO:0006021: inositol biosynthetic process2.47E-03
81GO:0051567: histone H3-K9 methylation2.47E-03
82GO:0044206: UMP salvage2.47E-03
83GO:0006346: methylation-dependent chromatin silencing2.47E-03
84GO:0006479: protein methylation2.47E-03
85GO:0051322: anaphase2.47E-03
86GO:0071249: cellular response to nitrate2.47E-03
87GO:0035279: mRNA cleavage involved in gene silencing by miRNA2.47E-03
88GO:0072488: ammonium transmembrane transport2.47E-03
89GO:0010082: regulation of root meristem growth2.71E-03
90GO:0009616: virus induced gene silencing3.16E-03
91GO:0006544: glycine metabolic process3.16E-03
92GO:0048497: maintenance of floral organ identity3.16E-03
93GO:1902183: regulation of shoot apical meristem development3.16E-03
94GO:0032957: inositol trisphosphate metabolic process3.16E-03
95GO:0032876: negative regulation of DNA endoreduplication3.16E-03
96GO:0030308: negative regulation of cell growth3.16E-03
97GO:0010375: stomatal complex patterning3.16E-03
98GO:0009736: cytokinin-activated signaling pathway3.37E-03
99GO:0048653: anther development3.46E-03
100GO:0010305: leaf vascular tissue pattern formation3.72E-03
101GO:0009909: regulation of flower development3.84E-03
102GO:0009913: epidermal cell differentiation3.91E-03
103GO:0006655: phosphatidylglycerol biosynthetic process3.91E-03
104GO:0016554: cytidine to uridine editing3.91E-03
105GO:0048831: regulation of shoot system development3.91E-03
106GO:0010315: auxin efflux3.91E-03
107GO:0006206: pyrimidine nucleobase metabolic process3.91E-03
108GO:0016458: gene silencing3.91E-03
109GO:0018258: protein O-linked glycosylation via hydroxyproline3.91E-03
110GO:0009643: photosynthetic acclimation3.91E-03
111GO:0009228: thiamine biosynthetic process3.91E-03
112GO:0046855: inositol phosphate dephosphorylation3.91E-03
113GO:0006563: L-serine metabolic process3.91E-03
114GO:0010405: arabinogalactan protein metabolic process3.91E-03
115GO:0010067: procambium histogenesis4.71E-03
116GO:0048509: regulation of meristem development4.71E-03
117GO:0046654: tetrahydrofolate biosynthetic process4.71E-03
118GO:0030488: tRNA methylation4.71E-03
119GO:2000037: regulation of stomatal complex patterning4.71E-03
120GO:0010310: regulation of hydrogen peroxide metabolic process4.71E-03
121GO:2000067: regulation of root morphogenesis4.71E-03
122GO:0071470: cellular response to osmotic stress4.71E-03
123GO:0032502: developmental process4.91E-03
124GO:0006821: chloride transport5.56E-03
125GO:0009396: folic acid-containing compound biosynthetic process5.56E-03
126GO:0035196: production of miRNAs involved in gene silencing by miRNA5.56E-03
127GO:0010103: stomatal complex morphogenesis5.56E-03
128GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.56E-03
129GO:0009610: response to symbiotic fungus5.56E-03
130GO:0006955: immune response5.56E-03
131GO:0048528: post-embryonic root development5.56E-03
132GO:0051607: defense response to virus6.28E-03
133GO:0000910: cytokinesis6.28E-03
134GO:0009787: regulation of abscisic acid-activated signaling pathway6.46E-03
135GO:0030162: regulation of proteolysis6.46E-03
136GO:0042255: ribosome assembly6.46E-03
137GO:0006353: DNA-templated transcription, termination6.46E-03
138GO:0048766: root hair initiation6.46E-03
139GO:0055075: potassium ion homeostasis6.46E-03
140GO:0000105: histidine biosynthetic process6.46E-03
141GO:0010027: thylakoid membrane organization6.65E-03
142GO:0009827: plant-type cell wall modification7.41E-03
143GO:0001510: RNA methylation7.41E-03
144GO:0010497: plasmodesmata-mediated intercellular transport7.41E-03
145GO:0010093: specification of floral organ identity7.41E-03
146GO:0009416: response to light stimulus7.81E-03
147GO:2000024: regulation of leaf development8.41E-03
148GO:0000373: Group II intron splicing8.41E-03
149GO:0000902: cell morphogenesis8.41E-03
150GO:0009051: pentose-phosphate shunt, oxidative branch8.41E-03
151GO:0048481: plant ovule development8.69E-03
152GO:0042761: very long-chain fatty acid biosynthetic process9.46E-03
153GO:2000280: regulation of root development9.46E-03
154GO:1900865: chloroplast RNA modification9.46E-03
155GO:0031425: chloroplast RNA processing9.46E-03
156GO:0009638: phototropism9.46E-03
157GO:0035999: tetrahydrofolate interconversion9.46E-03
158GO:0040008: regulation of growth1.00E-02
159GO:0006535: cysteine biosynthetic process from serine1.05E-02
160GO:0048829: root cap development1.05E-02
161GO:0009641: shade avoidance1.05E-02
162GO:0006949: syncytium formation1.05E-02
163GO:0006816: calcium ion transport1.17E-02
164GO:0046856: phosphatidylinositol dephosphorylation1.17E-02
165GO:0010015: root morphogenesis1.17E-02
166GO:0009739: response to gibberellin1.23E-02
167GO:0015706: nitrate transport1.29E-02
168GO:0016024: CDP-diacylglycerol biosynthetic process1.29E-02
169GO:0010582: floral meristem determinacy1.29E-02
170GO:0008361: regulation of cell size1.29E-02
171GO:0006790: sulfur compound metabolic process1.29E-02
172GO:0010588: cotyledon vascular tissue pattern formation1.41E-02
173GO:0010102: lateral root morphogenesis1.41E-02
174GO:0009785: blue light signaling pathway1.41E-02
175GO:0006006: glucose metabolic process1.41E-02
176GO:0006541: glutamine metabolic process1.53E-02
177GO:0006351: transcription, DNA-templated1.53E-02
178GO:0010167: response to nitrate1.66E-02
179GO:0090351: seedling development1.66E-02
180GO:0046854: phosphatidylinositol phosphorylation1.66E-02
181GO:0006071: glycerol metabolic process1.80E-02
182GO:0006833: water transport1.80E-02
183GO:0009658: chloroplast organization1.85E-02
184GO:0005992: trehalose biosynthetic process1.93E-02
185GO:0019344: cysteine biosynthetic process1.93E-02
186GO:0006825: copper ion transport2.07E-02
187GO:0051302: regulation of cell division2.07E-02
188GO:0016998: cell wall macromolecule catabolic process2.22E-02
189GO:0048316: seed development2.36E-02
190GO:0031348: negative regulation of defense response2.37E-02
191GO:0080167: response to karrikin2.43E-02
192GO:0071215: cellular response to abscisic acid stimulus2.52E-02
193GO:0010227: floral organ abscission2.52E-02
194GO:0006284: base-excision repair2.67E-02
195GO:0070417: cellular response to cold2.83E-02
196GO:0000226: microtubule cytoskeleton organization2.99E-02
197GO:0010501: RNA secondary structure unwinding2.99E-02
198GO:0010051: xylem and phloem pattern formation2.99E-02
199GO:0010087: phloem or xylem histogenesis2.99E-02
200GO:0042631: cellular response to water deprivation2.99E-02
201GO:0030154: cell differentiation3.02E-02
202GO:0045892: negative regulation of transcription, DNA-templated3.10E-02
203GO:0016567: protein ubiquitination3.15E-02
204GO:0009958: positive gravitropism3.16E-02
205GO:0006342: chromatin silencing3.16E-02
206GO:0048544: recognition of pollen3.32E-02
207GO:0009646: response to absence of light3.32E-02
208GO:0048825: cotyledon development3.49E-02
209GO:0008654: phospholipid biosynthetic process3.49E-02
210GO:0009058: biosynthetic process3.62E-02
211GO:0071554: cell wall organization or biogenesis3.67E-02
212GO:0000302: response to reactive oxygen species3.67E-02
213GO:0080156: mitochondrial mRNA modification3.67E-02
214GO:0010583: response to cyclopentenone3.84E-02
215GO:0031047: gene silencing by RNA3.84E-02
216GO:0009630: gravitropism3.84E-02
217GO:0009790: embryo development4.01E-02
218GO:0010090: trichome morphogenesis4.02E-02
219GO:0048364: root development4.15E-02
220GO:0009828: plant-type cell wall loosening4.20E-02
221GO:0071805: potassium ion transmembrane transport4.39E-02
222GO:0007267: cell-cell signaling4.39E-02
223GO:0001666: response to hypoxia4.76E-02
224GO:0009451: RNA modification4.83E-02
225GO:0010029: regulation of seed germination4.95E-02
226GO:0009816: defense response to bacterium, incompatible interaction4.95E-02
RankGO TermAdjusted P value
1GO:0004401: histidinol-phosphatase activity0.00E+00
2GO:0004056: argininosuccinate lyase activity0.00E+00
3GO:0070009: serine-type aminopeptidase activity0.00E+00
4GO:0052834: inositol monophosphate phosphatase activity0.00E+00
5GO:0004674: protein serine/threonine kinase activity4.01E-06
6GO:0016301: kinase activity1.48E-04
7GO:0042834: peptidoglycan binding3.63E-04
8GO:0046030: inositol trisphosphate phosphatase activity3.63E-04
9GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity3.63E-04
10GO:0016274: protein-arginine N-methyltransferase activity3.63E-04
11GO:0004156: dihydropteroate synthase activity3.63E-04
12GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity3.63E-04
13GO:0004008: copper-exporting ATPase activity3.63E-04
14GO:0004071: aspartate-ammonia ligase activity3.63E-04
15GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity3.63E-04
16GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.63E-04
17GO:0004830: tryptophan-tRNA ligase activity3.63E-04
18GO:0010347: L-galactose-1-phosphate phosphatase activity3.63E-04
19GO:0004016: adenylate cyclase activity3.63E-04
20GO:0009672: auxin:proton symporter activity6.94E-04
21GO:0008934: inositol monophosphate 1-phosphatase activity7.89E-04
22GO:0052833: inositol monophosphate 4-phosphatase activity7.89E-04
23GO:0015929: hexosaminidase activity7.89E-04
24GO:0004563: beta-N-acetylhexosaminidase activity7.89E-04
25GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity7.89E-04
26GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity7.89E-04
27GO:0009884: cytokinin receptor activity7.89E-04
28GO:0035241: protein-arginine omega-N monomethyltransferase activity7.89E-04
29GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity7.89E-04
30GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity7.89E-04
31GO:0052832: inositol monophosphate 3-phosphatase activity7.89E-04
32GO:0005524: ATP binding1.12E-03
33GO:0010329: auxin efflux transmembrane transporter activity1.20E-03
34GO:0005262: calcium channel activity1.20E-03
35GO:0017150: tRNA dihydrouridine synthase activity1.28E-03
36GO:0042781: 3'-tRNA processing endoribonuclease activity1.28E-03
37GO:0005034: osmosensor activity1.28E-03
38GO:0070180: large ribosomal subunit rRNA binding1.28E-03
39GO:0008469: histone-arginine N-methyltransferase activity1.28E-03
40GO:0070330: aromatase activity1.28E-03
41GO:0035197: siRNA binding1.84E-03
42GO:0001872: (1->3)-beta-D-glucan binding1.84E-03
43GO:0042803: protein homodimerization activity2.14E-03
44GO:0033612: receptor serine/threonine kinase binding2.27E-03
45GO:0004672: protein kinase activity2.39E-03
46GO:0019199: transmembrane receptor protein kinase activity2.47E-03
47GO:0005253: anion channel activity2.47E-03
48GO:0046556: alpha-L-arabinofuranosidase activity2.47E-03
49GO:0004845: uracil phosphoribosyltransferase activity2.47E-03
50GO:0004345: glucose-6-phosphate dehydrogenase activity2.47E-03
51GO:0004372: glycine hydroxymethyltransferase activity3.16E-03
52GO:0018685: alkane 1-monooxygenase activity3.16E-03
53GO:0008725: DNA-3-methyladenine glycosylase activity3.16E-03
54GO:0004812: aminoacyl-tRNA ligase activity3.20E-03
55GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity3.91E-03
56GO:0008519: ammonium transmembrane transporter activity3.91E-03
57GO:0005247: voltage-gated chloride channel activity3.91E-03
58GO:0004605: phosphatidate cytidylyltransferase activity3.91E-03
59GO:1990714: hydroxyproline O-galactosyltransferase activity3.91E-03
60GO:0008168: methyltransferase activity4.11E-03
61GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.71E-03
62GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.71E-03
63GO:0004849: uridine kinase activity4.71E-03
64GO:0004656: procollagen-proline 4-dioxygenase activity4.71E-03
65GO:0019900: kinase binding4.71E-03
66GO:0004124: cysteine synthase activity4.71E-03
67GO:0008195: phosphatidate phosphatase activity4.71E-03
68GO:0000156: phosphorelay response regulator activity5.24E-03
69GO:0005375: copper ion transmembrane transporter activity7.41E-03
70GO:0008173: RNA methyltransferase activity7.41E-03
71GO:0008889: glycerophosphodiester phosphodiesterase activity8.41E-03
72GO:0004871: signal transducer activity8.53E-03
73GO:0004673: protein histidine kinase activity1.05E-02
74GO:0004805: trehalose-phosphatase activity1.05E-02
75GO:0008171: O-methyltransferase activity1.05E-02
76GO:0008017: microtubule binding1.13E-02
77GO:0005089: Rho guanyl-nucleotide exchange factor activity1.17E-02
78GO:0004519: endonuclease activity1.24E-02
79GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.29E-02
80GO:0004521: endoribonuclease activity1.29E-02
81GO:0004022: alcohol dehydrogenase (NAD) activity1.41E-02
82GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.41E-02
83GO:0031072: heat shock protein binding1.41E-02
84GO:0000155: phosphorelay sensor kinase activity1.41E-02
85GO:0031418: L-ascorbic acid binding1.93E-02
86GO:0005345: purine nucleobase transmembrane transporter activity2.07E-02
87GO:0015079: potassium ion transmembrane transporter activity2.07E-02
88GO:0043424: protein histidine kinase binding2.07E-02
89GO:0035251: UDP-glucosyltransferase activity2.22E-02
90GO:0004650: polygalacturonase activity2.51E-02
91GO:0003727: single-stranded RNA binding2.67E-02
92GO:0008514: organic anion transmembrane transporter activity2.67E-02
93GO:0019901: protein kinase binding3.49E-02
94GO:0016762: xyloglucan:xyloglucosyl transferase activity3.67E-02
95GO:0030170: pyridoxal phosphate binding3.81E-02
96GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.87E-02
97GO:0030246: carbohydrate binding3.98E-02
98GO:0016759: cellulose synthase activity4.20E-02
99GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.41E-02
100GO:0016413: O-acetyltransferase activity4.57E-02
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Gene type



Gene DE type