Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G18520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
2GO:0017038: protein import0.00E+00
3GO:0046460: neutral lipid biosynthetic process0.00E+00
4GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
5GO:0042407: cristae formation0.00E+00
6GO:0090279: regulation of calcium ion import0.00E+00
7GO:0031116: positive regulation of microtubule polymerization0.00E+00
8GO:0042817: pyridoxal metabolic process0.00E+00
9GO:0018023: peptidyl-lysine trimethylation0.00E+00
10GO:0071474: cellular hyperosmotic response0.00E+00
11GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
12GO:0070125: mitochondrial translational elongation0.00E+00
13GO:0006429: leucyl-tRNA aminoacylation0.00E+00
14GO:0043488: regulation of mRNA stability0.00E+00
15GO:0006415: translational termination4.39E-05
16GO:0015995: chlorophyll biosynthetic process1.01E-04
17GO:0032543: mitochondrial translation1.08E-04
18GO:0045038: protein import into chloroplast thylakoid membrane1.08E-04
19GO:0009658: chloroplast organization1.46E-04
20GO:0000476: maturation of 4.5S rRNA3.29E-04
21GO:0000967: rRNA 5'-end processing3.29E-04
22GO:0000481: maturation of 5S rRNA3.29E-04
23GO:0042547: cell wall modification involved in multidimensional cell growth3.29E-04
24GO:0043087: regulation of GTPase activity3.29E-04
25GO:1902458: positive regulation of stomatal opening3.29E-04
26GO:0034337: RNA folding3.29E-04
27GO:0005991: trehalose metabolic process3.29E-04
28GO:0006747: FAD biosynthetic process3.29E-04
29GO:0006419: alanyl-tRNA aminoacylation3.29E-04
30GO:0070413: trehalose metabolism in response to stress3.48E-04
31GO:0032544: plastid translation4.26E-04
32GO:0010206: photosystem II repair5.12E-04
33GO:0006782: protoporphyrinogen IX biosynthetic process7.06E-04
34GO:0006432: phenylalanyl-tRNA aminoacylation7.18E-04
35GO:0007154: cell communication7.18E-04
36GO:0018026: peptidyl-lysine monomethylation7.18E-04
37GO:0034755: iron ion transmembrane transport7.18E-04
38GO:0006423: cysteinyl-tRNA aminoacylation7.18E-04
39GO:0006435: threonyl-tRNA aminoacylation7.18E-04
40GO:1900033: negative regulation of trichome patterning7.18E-04
41GO:1903426: regulation of reactive oxygen species biosynthetic process7.18E-04
42GO:0015804: neutral amino acid transport7.18E-04
43GO:0051262: protein tetramerization7.18E-04
44GO:0034470: ncRNA processing7.18E-04
45GO:0006739: NADP metabolic process7.18E-04
46GO:0009684: indoleacetic acid biosynthetic process8.13E-04
47GO:0009627: systemic acquired resistance8.54E-04
48GO:0016024: CDP-diacylglycerol biosynthetic process9.28E-04
49GO:0080055: low-affinity nitrate transport1.16E-03
50GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.16E-03
51GO:0051604: protein maturation1.16E-03
52GO:0015940: pantothenate biosynthetic process1.16E-03
53GO:0001578: microtubule bundle formation1.16E-03
54GO:0045493: xylan catabolic process1.16E-03
55GO:0033591: response to L-ascorbic acid1.16E-03
56GO:0005992: trehalose biosynthetic process1.63E-03
57GO:0009647: skotomorphogenesis1.67E-03
58GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.67E-03
59GO:0008615: pyridoxine biosynthetic process1.67E-03
60GO:0006424: glutamyl-tRNA aminoacylation1.67E-03
61GO:0006168: adenine salvage1.67E-03
62GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.67E-03
63GO:0006166: purine ribonucleoside salvage1.67E-03
64GO:0009102: biotin biosynthetic process1.67E-03
65GO:0010601: positive regulation of auxin biosynthetic process1.67E-03
66GO:0006418: tRNA aminoacylation for protein translation1.80E-03
67GO:0009793: embryo development ending in seed dormancy1.80E-03
68GO:0048511: rhythmic process1.97E-03
69GO:0007020: microtubule nucleation2.24E-03
70GO:0071483: cellular response to blue light2.24E-03
71GO:0006734: NADH metabolic process2.24E-03
72GO:0048629: trichome patterning2.24E-03
73GO:0010109: regulation of photosynthesis2.24E-03
74GO:0051322: anaphase2.24E-03
75GO:0009765: photosynthesis, light harvesting2.24E-03
76GO:0046785: microtubule polymerization2.87E-03
77GO:0016120: carotene biosynthetic process2.87E-03
78GO:0016123: xanthophyll biosynthetic process2.87E-03
79GO:0044209: AMP salvage2.87E-03
80GO:0006465: signal peptide processing2.87E-03
81GO:0007018: microtubule-based movement3.47E-03
82GO:0006655: phosphatidylglycerol biosynthetic process3.54E-03
83GO:0016554: cytidine to uridine editing3.54E-03
84GO:0048831: regulation of shoot system development3.54E-03
85GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.54E-03
86GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.54E-03
87GO:0006508: proteolysis3.73E-03
88GO:0034389: lipid particle organization4.26E-03
89GO:1901259: chloroplast rRNA processing4.26E-03
90GO:0030488: tRNA methylation4.26E-03
91GO:0009955: adaxial/abaxial pattern specification4.26E-03
92GO:0048437: floral organ development5.03E-03
93GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.03E-03
94GO:0010196: nonphotochemical quenching5.03E-03
95GO:0006400: tRNA modification5.03E-03
96GO:0009395: phospholipid catabolic process5.03E-03
97GO:0048528: post-embryonic root development5.03E-03
98GO:0010027: thylakoid membrane organization5.76E-03
99GO:0006605: protein targeting5.85E-03
100GO:0010078: maintenance of root meristem identity5.85E-03
101GO:0032508: DNA duplex unwinding5.85E-03
102GO:2000070: regulation of response to water deprivation5.85E-03
103GO:0000105: histidine biosynthetic process5.85E-03
104GO:0009231: riboflavin biosynthetic process5.85E-03
105GO:0052543: callose deposition in cell wall5.85E-03
106GO:0009657: plastid organization6.71E-03
107GO:0043562: cellular response to nitrogen levels6.71E-03
108GO:0071482: cellular response to light stimulus6.71E-03
109GO:0022900: electron transport chain6.71E-03
110GO:0009821: alkaloid biosynthetic process7.60E-03
111GO:0019432: triglyceride biosynthetic process7.60E-03
112GO:0006783: heme biosynthetic process7.60E-03
113GO:0006413: translational initiation8.08E-03
114GO:0016042: lipid catabolic process8.41E-03
115GO:1900865: chloroplast RNA modification8.55E-03
116GO:0005982: starch metabolic process8.55E-03
117GO:0043067: regulation of programmed cell death8.55E-03
118GO:0006779: porphyrin-containing compound biosynthetic process8.55E-03
119GO:0045490: pectin catabolic process8.84E-03
120GO:0045036: protein targeting to chloroplast9.53E-03
121GO:0006949: syncytium formation9.53E-03
122GO:0045087: innate immune response9.55E-03
123GO:0006879: cellular iron ion homeostasis1.06E-02
124GO:0006352: DNA-templated transcription, initiation1.06E-02
125GO:0000272: polysaccharide catabolic process1.06E-02
126GO:0045037: protein import into chloroplast stroma1.16E-02
127GO:0010588: cotyledon vascular tissue pattern formation1.27E-02
128GO:2000012: regulation of auxin polar transport1.27E-02
129GO:0010143: cutin biosynthetic process1.38E-02
130GO:0010207: photosystem II assembly1.38E-02
131GO:0048467: gynoecium development1.38E-02
132GO:0019853: L-ascorbic acid biosynthetic process1.50E-02
133GO:0090351: seedling development1.50E-02
134GO:0009664: plant-type cell wall organization1.55E-02
135GO:0046686: response to cadmium ion1.61E-02
136GO:0006071: glycerol metabolic process1.62E-02
137GO:0006833: water transport1.62E-02
138GO:0000162: tryptophan biosynthetic process1.62E-02
139GO:0051603: proteolysis involved in cellular protein catabolic process1.73E-02
140GO:0007010: cytoskeleton organization1.75E-02
141GO:0006289: nucleotide-excision repair1.75E-02
142GO:0008299: isoprenoid biosynthetic process1.87E-02
143GO:0043622: cortical microtubule organization1.87E-02
144GO:0003333: amino acid transmembrane transport2.00E-02
145GO:0061077: chaperone-mediated protein folding2.00E-02
146GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.11E-02
147GO:0009814: defense response, incompatible interaction2.14E-02
148GO:0031348: negative regulation of defense response2.14E-02
149GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.27E-02
150GO:0006012: galactose metabolic process2.27E-02
151GO:0009306: protein secretion2.41E-02
152GO:0006396: RNA processing2.45E-02
153GO:0016117: carotenoid biosynthetic process2.55E-02
154GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.55E-02
155GO:0000271: polysaccharide biosynthetic process2.70E-02
156GO:0080022: primary root development2.70E-02
157GO:0034220: ion transmembrane transport2.70E-02
158GO:0010087: phloem or xylem histogenesis2.70E-02
159GO:0009958: positive gravitropism2.85E-02
160GO:0045489: pectin biosynthetic process2.85E-02
161GO:0010197: polar nucleus fusion2.85E-02
162GO:0010182: sugar mediated signaling pathway2.85E-02
163GO:0055085: transmembrane transport2.96E-02
164GO:0042752: regulation of circadian rhythm3.00E-02
165GO:0009646: response to absence of light3.00E-02
166GO:0032259: methylation3.12E-02
167GO:0048825: cotyledon development3.15E-02
168GO:0009556: microsporogenesis3.15E-02
169GO:0009851: auxin biosynthetic process3.15E-02
170GO:0009790: embryo development3.47E-02
171GO:0016032: viral process3.47E-02
172GO:0030163: protein catabolic process3.63E-02
173GO:0010090: trichome morphogenesis3.63E-02
174GO:0009828: plant-type cell wall loosening3.79E-02
175GO:0000910: cytokinesis4.13E-02
176GO:0009451: RNA modification4.19E-02
177GO:0016126: sterol biosynthetic process4.30E-02
178GO:0007166: cell surface receptor signaling pathway4.68E-02
179GO:0010411: xyloglucan metabolic process4.82E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0043864: indoleacetamide hydrolase activity0.00E+00
3GO:0050613: delta14-sterol reductase activity0.00E+00
4GO:0045435: lycopene epsilon cyclase activity0.00E+00
5GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
6GO:0004822: isoleucine-tRNA ligase activity0.00E+00
7GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
8GO:0004823: leucine-tRNA ligase activity0.00E+00
9GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
10GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
11GO:0005048: signal sequence binding0.00E+00
12GO:0004076: biotin synthase activity0.00E+00
13GO:0010349: L-galactose dehydrogenase activity0.00E+00
14GO:0002161: aminoacyl-tRNA editing activity1.74E-05
15GO:0003747: translation release factor activity1.98E-05
16GO:0016149: translation release factor activity, codon specific3.86E-05
17GO:0016851: magnesium chelatase activity3.86E-05
18GO:0000049: tRNA binding5.49E-05
19GO:0008236: serine-type peptidase activity1.11E-04
20GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.56E-04
21GO:0030570: pectate lyase activity2.28E-04
22GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.29E-04
23GO:0004813: alanine-tRNA ligase activity3.29E-04
24GO:0004853: uroporphyrinogen decarboxylase activity3.29E-04
25GO:0052856: NADHX epimerase activity3.29E-04
26GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.29E-04
27GO:0052857: NADPHX epimerase activity3.29E-04
28GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.29E-04
29GO:0005227: calcium activated cation channel activity3.29E-04
30GO:0004733: pyridoxamine-phosphate oxidase activity3.29E-04
31GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.29E-04
32GO:0008017: microtubule binding3.80E-04
33GO:0016791: phosphatase activity5.94E-04
34GO:0080097: L-tryptophan:pyruvate aminotransferase activity7.18E-04
35GO:0003919: FMN adenylyltransferase activity7.18E-04
36GO:0016630: protochlorophyllide reductase activity7.18E-04
37GO:0004829: threonine-tRNA ligase activity7.18E-04
38GO:0004826: phenylalanine-tRNA ligase activity7.18E-04
39GO:0015172: acidic amino acid transmembrane transporter activity7.18E-04
40GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity7.18E-04
41GO:0009977: proton motive force dependent protein transmembrane transporter activity7.18E-04
42GO:0004817: cysteine-tRNA ligase activity7.18E-04
43GO:0016788: hydrolase activity, acting on ester bonds7.94E-04
44GO:0005504: fatty acid binding1.16E-03
45GO:0003913: DNA photolyase activity1.16E-03
46GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.16E-03
47GO:0070402: NADPH binding1.16E-03
48GO:0080054: low-affinity nitrate transmembrane transporter activity1.16E-03
49GO:0015462: ATPase-coupled protein transmembrane transporter activity1.16E-03
50GO:0004180: carboxypeptidase activity1.16E-03
51GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.18E-03
52GO:0015175: neutral amino acid transmembrane transporter activity1.67E-03
53GO:0003999: adenine phosphoribosyltransferase activity1.67E-03
54GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.67E-03
55GO:0001872: (1->3)-beta-D-glucan binding1.67E-03
56GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity1.67E-03
57GO:0016987: sigma factor activity2.24E-03
58GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.24E-03
59GO:0070628: proteasome binding2.24E-03
60GO:0045430: chalcone isomerase activity2.24E-03
61GO:0009044: xylan 1,4-beta-xylosidase activity2.24E-03
62GO:0046556: alpha-L-arabinofuranosidase activity2.24E-03
63GO:0016279: protein-lysine N-methyltransferase activity2.24E-03
64GO:0001053: plastid sigma factor activity2.24E-03
65GO:0004045: aminoacyl-tRNA hydrolase activity2.24E-03
66GO:0004812: aminoacyl-tRNA ligase activity2.77E-03
67GO:0016846: carbon-sulfur lyase activity2.87E-03
68GO:0004040: amidase activity2.87E-03
69GO:0003777: microtubule motor activity3.20E-03
70GO:0031593: polyubiquitin binding3.54E-03
71GO:0004629: phospholipase C activity3.54E-03
72GO:0102229: amylopectin maltohydrolase activity3.54E-03
73GO:0042578: phosphoric ester hydrolase activity3.54E-03
74GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.54E-03
75GO:2001070: starch binding3.54E-03
76GO:0016161: beta-amylase activity4.26E-03
77GO:0003730: mRNA 3'-UTR binding4.26E-03
78GO:0004144: diacylglycerol O-acyltransferase activity4.26E-03
79GO:0005261: cation channel activity4.26E-03
80GO:0004435: phosphatidylinositol phospholipase C activity4.26E-03
81GO:0009927: histidine phosphotransfer kinase activity4.26E-03
82GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.26E-03
83GO:0005525: GTP binding4.53E-03
84GO:0009881: photoreceptor activity5.03E-03
85GO:0043022: ribosome binding5.85E-03
86GO:0004033: aldo-keto reductase (NADP) activity5.85E-03
87GO:0008312: 7S RNA binding5.85E-03
88GO:0016829: lyase activity6.48E-03
89GO:0008173: RNA methyltransferase activity6.71E-03
90GO:0030247: polysaccharide binding6.79E-03
91GO:0005381: iron ion transmembrane transporter activity8.55E-03
92GO:0016844: strictosidine synthase activity8.55E-03
93GO:0004805: trehalose-phosphatase activity9.53E-03
94GO:0003746: translation elongation factor activity9.55E-03
95GO:0003993: acid phosphatase activity9.99E-03
96GO:0008559: xenobiotic-transporting ATPase activity1.06E-02
97GO:0047372: acylglycerol lipase activity1.06E-02
98GO:0003743: translation initiation factor activity1.08E-02
99GO:0004185: serine-type carboxypeptidase activity1.23E-02
100GO:0031072: heat shock protein binding1.27E-02
101GO:0051537: 2 iron, 2 sulfur cluster binding1.34E-02
102GO:0008266: poly(U) RNA binding1.38E-02
103GO:0005524: ATP binding1.49E-02
104GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.62E-02
105GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.62E-02
106GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.62E-02
107GO:0005528: FK506 binding1.75E-02
108GO:0043130: ubiquitin binding1.75E-02
109GO:0051087: chaperone binding1.87E-02
110GO:0004176: ATP-dependent peptidase activity2.00E-02
111GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.14E-02
112GO:0052689: carboxylic ester hydrolase activity2.30E-02
113GO:0003756: protein disulfide isomerase activity2.41E-02
114GO:0010181: FMN binding3.00E-02
115GO:0016853: isomerase activity3.00E-02
116GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.14E-02
117GO:0004252: serine-type endopeptidase activity3.30E-02
118GO:0003924: GTPase activity3.30E-02
119GO:0048038: quinone binding3.31E-02
120GO:0003684: damaged DNA binding3.79E-02
121GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.83E-02
122GO:0008483: transaminase activity3.96E-02
123GO:0008237: metallopeptidase activity3.96E-02
124GO:0003729: mRNA binding3.98E-02
125GO:0016597: amino acid binding4.13E-02
126GO:0015250: water channel activity4.30E-02
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Gene type



Gene DE type