GO Enrichment Analysis of Co-expressed Genes with
AT4G18460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009069: serine family amino acid metabolic process | 0.00E+00 |
| 2 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 3 | GO:0070178: D-serine metabolic process | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 6 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 7 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 8 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 9 | GO:0016556: mRNA modification | 3.03E-06 |
| 10 | GO:0042371: vitamin K biosynthetic process | 7.75E-05 |
| 11 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 7.75E-05 |
| 12 | GO:2000025: regulation of leaf formation | 7.75E-05 |
| 13 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 7.75E-05 |
| 14 | GO:1901135: carbohydrate derivative metabolic process | 7.75E-05 |
| 15 | GO:0000476: maturation of 4.5S rRNA | 7.75E-05 |
| 16 | GO:0000967: rRNA 5'-end processing | 7.75E-05 |
| 17 | GO:0071732: cellular response to nitric oxide | 1.81E-04 |
| 18 | GO:0001682: tRNA 5'-leader removal | 1.85E-04 |
| 19 | GO:0034470: ncRNA processing | 1.85E-04 |
| 20 | GO:0010198: synergid death | 1.85E-04 |
| 21 | GO:1900871: chloroplast mRNA modification | 1.85E-04 |
| 22 | GO:0005977: glycogen metabolic process | 3.11E-04 |
| 23 | GO:0006954: inflammatory response | 3.11E-04 |
| 24 | GO:0071369: cellular response to ethylene stimulus | 3.33E-04 |
| 25 | GO:0010239: chloroplast mRNA processing | 4.49E-04 |
| 26 | GO:0010021: amylopectin biosynthetic process | 5.98E-04 |
| 27 | GO:0022622: root system development | 5.98E-04 |
| 28 | GO:0071281: cellular response to iron ion | 6.36E-04 |
| 29 | GO:0040008: regulation of growth | 6.49E-04 |
| 30 | GO:0009733: response to auxin | 7.13E-04 |
| 31 | GO:0010236: plastoquinone biosynthetic process | 7.57E-04 |
| 32 | GO:0050665: hydrogen peroxide biosynthetic process | 9.24E-04 |
| 33 | GO:0006563: L-serine metabolic process | 9.24E-04 |
| 34 | GO:0032973: amino acid export | 9.24E-04 |
| 35 | GO:0009854: oxidative photosynthetic carbon pathway | 1.10E-03 |
| 36 | GO:0009648: photoperiodism | 1.10E-03 |
| 37 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.10E-03 |
| 38 | GO:0034389: lipid particle organization | 1.10E-03 |
| 39 | GO:1901259: chloroplast rRNA processing | 1.10E-03 |
| 40 | GO:0042372: phylloquinone biosynthetic process | 1.10E-03 |
| 41 | GO:0032880: regulation of protein localization | 1.29E-03 |
| 42 | GO:0009772: photosynthetic electron transport in photosystem II | 1.29E-03 |
| 43 | GO:0043090: amino acid import | 1.29E-03 |
| 44 | GO:0010196: nonphotochemical quenching | 1.29E-03 |
| 45 | GO:0000105: histidine biosynthetic process | 1.48E-03 |
| 46 | GO:0006353: DNA-templated transcription, termination | 1.48E-03 |
| 47 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.69E-03 |
| 48 | GO:0032544: plastid translation | 1.69E-03 |
| 49 | GO:0009657: plastid organization | 1.69E-03 |
| 50 | GO:0019432: triglyceride biosynthetic process | 1.91E-03 |
| 51 | GO:0080144: amino acid homeostasis | 1.91E-03 |
| 52 | GO:1900865: chloroplast RNA modification | 2.14E-03 |
| 53 | GO:0031425: chloroplast RNA processing | 2.14E-03 |
| 54 | GO:0006415: translational termination | 2.61E-03 |
| 55 | GO:0009073: aromatic amino acid family biosynthetic process | 2.61E-03 |
| 56 | GO:0005983: starch catabolic process | 2.86E-03 |
| 57 | GO:2000012: regulation of auxin polar transport | 3.12E-03 |
| 58 | GO:0006071: glycerol metabolic process | 3.94E-03 |
| 59 | GO:0000162: tryptophan biosynthetic process | 3.94E-03 |
| 60 | GO:0030150: protein import into mitochondrial matrix | 4.23E-03 |
| 61 | GO:0016575: histone deacetylation | 4.52E-03 |
| 62 | GO:0031348: negative regulation of defense response | 5.13E-03 |
| 63 | GO:0006730: one-carbon metabolic process | 5.13E-03 |
| 64 | GO:0005975: carbohydrate metabolic process | 5.21E-03 |
| 65 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 6.10E-03 |
| 66 | GO:0008284: positive regulation of cell proliferation | 6.10E-03 |
| 67 | GO:0008033: tRNA processing | 6.44E-03 |
| 68 | GO:0048653: anther development | 6.44E-03 |
| 69 | GO:0009958: positive gravitropism | 6.78E-03 |
| 70 | GO:0019252: starch biosynthetic process | 7.49E-03 |
| 71 | GO:0002229: defense response to oomycetes | 7.85E-03 |
| 72 | GO:0000302: response to reactive oxygen species | 7.85E-03 |
| 73 | GO:0048366: leaf development | 9.78E-03 |
| 74 | GO:0010027: thylakoid membrane organization | 1.02E-02 |
| 75 | GO:0016311: dephosphorylation | 1.18E-02 |
| 76 | GO:0006811: ion transport | 1.31E-02 |
| 77 | GO:0048527: lateral root development | 1.36E-02 |
| 78 | GO:0045087: innate immune response | 1.45E-02 |
| 79 | GO:0006397: mRNA processing | 1.59E-02 |
| 80 | GO:0006839: mitochondrial transport | 1.59E-02 |
| 81 | GO:0051707: response to other organism | 1.73E-02 |
| 82 | GO:0006364: rRNA processing | 2.14E-02 |
| 83 | GO:0009734: auxin-activated signaling pathway | 2.15E-02 |
| 84 | GO:0006413: translational initiation | 3.86E-02 |
| 85 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.19E-02 |
| 86 | GO:0009739: response to gibberellin | 4.40E-02 |
| 87 | GO:0007166: cell surface receptor signaling pathway | 4.47E-02 |
| 88 | GO:0006470: protein dephosphorylation | 4.47E-02 |
| 89 | GO:0008380: RNA splicing | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015267: channel activity | 0.00E+00 |
| 2 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 3 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 4 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 7 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 8 | GO:0030378: serine racemase activity | 0.00E+00 |
| 9 | GO:0003941: L-serine ammonia-lyase activity | 0.00E+00 |
| 10 | GO:0008721: D-serine ammonia-lyase activity | 0.00E+00 |
| 11 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 12 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 13 | GO:0097367: carbohydrate derivative binding | 7.75E-05 |
| 14 | GO:0050308: sugar-phosphatase activity | 7.75E-05 |
| 15 | GO:0019203: carbohydrate phosphatase activity | 7.75E-05 |
| 16 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.85E-04 |
| 17 | GO:0019156: isoamylase activity | 1.85E-04 |
| 18 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 4.49E-04 |
| 19 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 4.49E-04 |
| 20 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 4.49E-04 |
| 21 | GO:0048487: beta-tubulin binding | 4.49E-04 |
| 22 | GO:0016149: translation release factor activity, codon specific | 4.49E-04 |
| 23 | GO:0016853: isomerase activity | 4.90E-04 |
| 24 | GO:0008891: glycolate oxidase activity | 5.98E-04 |
| 25 | GO:0004659: prenyltransferase activity | 5.98E-04 |
| 26 | GO:0004045: aminoacyl-tRNA hydrolase activity | 5.98E-04 |
| 27 | GO:2001070: starch binding | 9.24E-04 |
| 28 | GO:0080030: methyl indole-3-acetate esterase activity | 9.24E-04 |
| 29 | GO:0004526: ribonuclease P activity | 9.24E-04 |
| 30 | GO:0004556: alpha-amylase activity | 9.24E-04 |
| 31 | GO:0004144: diacylglycerol O-acyltransferase activity | 1.10E-03 |
| 32 | GO:0043022: ribosome binding | 1.48E-03 |
| 33 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.69E-03 |
| 34 | GO:0043621: protein self-association | 1.78E-03 |
| 35 | GO:0003747: translation release factor activity | 1.91E-03 |
| 36 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.91E-03 |
| 37 | GO:0004565: beta-galactosidase activity | 3.12E-03 |
| 38 | GO:0015266: protein channel activity | 3.12E-03 |
| 39 | GO:0004535: poly(A)-specific ribonuclease activity | 3.38E-03 |
| 40 | GO:0008083: growth factor activity | 3.38E-03 |
| 41 | GO:0003887: DNA-directed DNA polymerase activity | 3.94E-03 |
| 42 | GO:0004407: histone deacetylase activity | 4.23E-03 |
| 43 | GO:0004176: ATP-dependent peptidase activity | 4.82E-03 |
| 44 | GO:0003723: RNA binding | 6.79E-03 |
| 45 | GO:0010181: FMN binding | 7.13E-03 |
| 46 | GO:0003684: damaged DNA binding | 8.97E-03 |
| 47 | GO:0008237: metallopeptidase activity | 9.36E-03 |
| 48 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.22E-02 |
| 49 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.45E-02 |
| 50 | GO:0004519: endonuclease activity | 1.66E-02 |
| 51 | GO:0015171: amino acid transmembrane transporter activity | 2.30E-02 |
| 52 | GO:0022857: transmembrane transporter activity | 2.64E-02 |
| 53 | GO:0019843: rRNA binding | 3.23E-02 |
| 54 | GO:0016787: hydrolase activity | 3.31E-02 |
| 55 | GO:0030170: pyridoxal phosphate binding | 3.48E-02 |
| 56 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.86E-02 |
| 57 | GO:0003743: translation initiation factor activity | 4.53E-02 |