co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16515

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007638: mechanosensory behavior	0.00E+00
2	GO:0007172: signal complex assembly	0.00E+00
3	GO:0010068: protoderm histogenesis	0.00E+00
4	GO:0071311: cellular response to acetate	0.00E+00
5	GO:0031222: arabinan catabolic process	0.00E+00
6	GO:0070979: protein K11-linked ubiquitination	0.00E+00
7	GO:0071260: cellular response to mechanical stimulus	0.00E+00
8	GO:0061157: mRNA destabilization	0.00E+00
9	GO:0009638: phototropism	3.51E-04
10	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.43E-04
11	GO:0006816: calcium ion transport	4.76E-04
12	GO:0006423: cysteinyl-tRNA aminoacylation	5.00E-04
13	GO:1900033: negative regulation of trichome patterning	5.00E-04
14	GO:0009786: regulation of asymmetric cell division	5.00E-04
15	GO:0009767: photosynthetic electron transport chain	6.19E-04
16	GO:0071230: cellular response to amino acid stimulus	8.13E-04
17	GO:0031145: anaphase-promoting complex-dependent catabolic process	8.13E-04
18	GO:0051604: protein maturation	8.13E-04
19	GO:0016050: vesicle organization	8.13E-04
20	GO:0051127: positive regulation of actin nucleation	8.13E-04
21	GO:0009733: response to auxin	8.16E-04
22	GO:0044211: CTP salvage	1.16E-03
23	GO:0048645: animal organ formation	1.16E-03
24	GO:2000904: regulation of starch metabolic process	1.16E-03
25	GO:0051513: regulation of monopolar cell growth	1.16E-03
26	GO:0007231: osmosensory signaling pathway	1.16E-03
27	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.16E-03
28	GO:0051639: actin filament network formation	1.16E-03
29	GO:0044206: UMP salvage	1.54E-03
30	GO:0033500: carbohydrate homeostasis	1.54E-03
31	GO:0044205: 'de novo' UMP biosynthetic process	1.54E-03
32	GO:0048629: trichome patterning	1.54E-03
33	GO:0051764: actin crosslink formation	1.54E-03
34	GO:0016123: xanthophyll biosynthetic process	1.97E-03
35	GO:0010158: abaxial cell fate specification	1.97E-03
36	GO:0032876: negative regulation of DNA endoreduplication	1.97E-03
37	GO:0006206: pyrimidine nucleobase metabolic process	2.43E-03
38	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.43E-03
39	GO:0010405: arabinogalactan protein metabolic process	2.43E-03
40	GO:0009959: negative gravitropism	2.43E-03
41	GO:0030154: cell differentiation	2.67E-03
42	GO:2000033: regulation of seed dormancy process	2.91E-03
43	GO:0030488: tRNA methylation	2.91E-03
44	GO:0010050: vegetative phase change	3.43E-03
45	GO:0010161: red light signaling pathway	3.43E-03
46	GO:0009610: response to symbiotic fungus	3.43E-03
47	GO:0009850: auxin metabolic process	3.98E-03
48	GO:0009704: de-etiolation	3.98E-03
49	GO:0032875: regulation of DNA endoreduplication	3.98E-03
50	GO:0040008: regulation of growth	4.09E-03
51	GO:0016310: phosphorylation	4.49E-03
52	GO:0009827: plant-type cell wall modification	4.56E-03
53	GO:0010100: negative regulation of photomorphogenesis	4.56E-03
54	GO:0006526: arginine biosynthetic process	4.56E-03
55	GO:0007389: pattern specification process	4.56E-03
56	GO:0010099: regulation of photomorphogenesis	4.56E-03
57	GO:0006783: heme biosynthetic process	5.16E-03
58	GO:0000902: cell morphogenesis	5.16E-03
59	GO:0009051: pentose-phosphate shunt, oxidative branch	5.16E-03
60	GO:0006357: regulation of transcription from RNA polymerase II promoter	5.75E-03
61	GO:0031425: chloroplast RNA processing	5.79E-03
62	GO:0009734: auxin-activated signaling pathway	6.31E-03
63	GO:0010162: seed dormancy process	6.45E-03
64	GO:0009299: mRNA transcription	6.45E-03
65	GO:0006535: cysteine biosynthetic process from serine	6.45E-03
66	GO:0048829: root cap development	6.45E-03
67	GO:0009773: photosynthetic electron transport in photosystem I	7.13E-03
68	GO:0010582: floral meristem determinacy	7.84E-03
69	GO:0009785: blue light signaling pathway	8.57E-03
70	GO:0010628: positive regulation of gene expression	8.57E-03
71	GO:0006006: glucose metabolic process	8.57E-03
72	GO:0030036: actin cytoskeleton organization	8.57E-03
73	GO:0009725: response to hormone	8.57E-03
74	GO:0009723: response to ethylene	9.11E-03
75	GO:0006468: protein phosphorylation	9.15E-03
76	GO:0009934: regulation of meristem structural organization	9.33E-03
77	GO:0090351: seedling development	1.01E-02
78	GO:0070588: calcium ion transmembrane transport	1.01E-02
79	GO:0009833: plant-type primary cell wall biogenesis	1.09E-02
80	GO:0010187: negative regulation of seed germination	1.17E-02
81	GO:0051017: actin filament bundle assembly	1.17E-02
82	GO:0005992: trehalose biosynthetic process	1.17E-02
83	GO:0019344: cysteine biosynthetic process	1.17E-02
84	GO:0006418: tRNA aminoacylation for protein translation	1.26E-02
85	GO:0006874: cellular calcium ion homeostasis	1.26E-02
86	GO:0006825: copper ion transport	1.26E-02
87	GO:0009740: gibberellic acid mediated signaling pathway	1.28E-02
88	GO:0006730: one-carbon metabolic process	1.43E-02
89	GO:0009686: gibberellin biosynthetic process	1.53E-02
90	GO:0010082: regulation of root meristem growth	1.53E-02
91	GO:0009751: response to salicylic acid	1.60E-02
92	GO:0019722: calcium-mediated signaling	1.62E-02
93	GO:0010214: seed coat development	1.62E-02
94	GO:0070417: cellular response to cold	1.71E-02
95	GO:0009058: biosynthetic process	1.79E-02
96	GO:0042335: cuticle development	1.81E-02
97	GO:0000271: polysaccharide biosynthetic process	1.81E-02
98	GO:0034220: ion transmembrane transport	1.81E-02
99	GO:0010087: phloem or xylem histogenesis	1.81E-02
100	GO:0045489: pectin biosynthetic process	1.91E-02
101	GO:0010182: sugar mediated signaling pathway	1.91E-02
102	GO:0071554: cell wall organization or biogenesis	2.22E-02
103	GO:0010583: response to cyclopentenone	2.32E-02
104	GO:0032502: developmental process	2.32E-02
105	GO:0009451: RNA modification	2.40E-02
106	GO:0071281: cellular response to iron ion	2.43E-02
107	GO:0010252: auxin homeostasis	2.54E-02
108	GO:0071555: cell wall organization	2.58E-02
109	GO:0007165: signal transduction	2.74E-02
110	GO:0010029: regulation of seed germination	3.00E-02
111	GO:0015995: chlorophyll biosynthetic process	3.24E-02
112	GO:0030244: cellulose biosynthetic process	3.48E-02
113	GO:0010311: lateral root formation	3.61E-02
114	GO:0009832: plant-type cell wall biogenesis	3.61E-02
115	GO:0000160: phosphorelay signal transduction system	3.61E-02
116	GO:0016051: carbohydrate biosynthetic process	4.12E-02
117	GO:0080167: response to karrikin	4.49E-02
118	GO:0006839: mitochondrial transport	4.52E-02
119	GO:0006897: endocytosis	4.66E-02
120	GO:0046777: protein autophosphorylation	4.80E-02
121	GO:0008283: cell proliferation	4.93E-02
122	GO:0009926: auxin polar transport	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0015276: ligand-gated ion channel activity	0.00E+00
2	GO:0016301: kinase activity	2.13E-05
3	GO:0008066: glutamate receptor activity	2.25E-04
4	GO:0004008: copper-exporting ATPase activity	2.25E-04
5	GO:0010313: phytochrome binding	2.25E-04
6	GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	2.25E-04
7	GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity	2.25E-04
8	GO:0050139: nicotinate-N-glucosyltransferase activity	2.25E-04
9	GO:0004674: protein serine/threonine kinase activity	3.81E-04
10	GO:0005089: Rho guanyl-nucleotide exchange factor activity	4.76E-04
11	GO:0015929: hexosaminidase activity	5.00E-04
12	GO:0004563: beta-N-acetylhexosaminidase activity	5.00E-04
13	GO:0050017: L-3-cyanoalanine synthase activity	5.00E-04
14	GO:0043425: bHLH transcription factor binding	5.00E-04
15	GO:0004817: cysteine-tRNA ligase activity	5.00E-04
16	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	5.00E-04
17	GO:0005262: calcium channel activity	6.19E-04
18	GO:0043621: protein self-association	1.06E-03
19	GO:0017172: cysteine dioxygenase activity	1.16E-03
20	GO:0019199: transmembrane receptor protein kinase activity	1.54E-03
21	GO:0046556: alpha-L-arabinofuranosidase activity	1.54E-03
22	GO:0004845: uracil phosphoribosyltransferase activity	1.54E-03
23	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.54E-03
24	GO:0080032: methyl jasmonate esterase activity	1.54E-03
25	GO:0044212: transcription regulatory region DNA binding	2.25E-03
26	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.43E-03
27	GO:0051015: actin filament binding	2.61E-03
28	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.73E-03
29	GO:0016759: cellulose synthase activity	2.78E-03
30	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.91E-03
31	GO:0004849: uridine kinase activity	2.91E-03
32	GO:0004124: cysteine synthase activity	2.91E-03
33	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.21E-03
34	GO:0004252: serine-type endopeptidase activity	3.29E-03
35	GO:0019899: enzyme binding	3.43E-03
36	GO:0005375: copper ion transmembrane transporter activity	4.56E-03
37	GO:0009672: auxin:proton symporter activity	5.79E-03
38	GO:0004805: trehalose-phosphatase activity	6.45E-03
39	GO:0008327: methyl-CpG binding	7.13E-03
40	GO:0010329: auxin efflux transmembrane transporter activity	8.57E-03
41	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.57E-03
42	GO:0004089: carbonate dehydratase activity	8.57E-03
43	GO:0016757: transferase activity, transferring glycosyl groups	9.06E-03
44	GO:0005217: intracellular ligand-gated ion channel activity	1.01E-02
45	GO:0004970: ionotropic glutamate receptor activity	1.01E-02
46	GO:0004857: enzyme inhibitor activity	1.17E-02
47	GO:0005524: ATP binding	1.28E-02
48	GO:0035251: UDP-glucosyltransferase activity	1.34E-02
49	GO:0004176: ATP-dependent peptidase activity	1.34E-02
50	GO:0033612: receptor serine/threonine kinase binding	1.34E-02
51	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.43E-02
52	GO:0004672: protein kinase activity	1.52E-02
53	GO:0030570: pectate lyase activity	1.53E-02
54	GO:0016760: cellulose synthase (UDP-forming) activity	1.53E-02
55	GO:0003727: single-stranded RNA binding	1.62E-02
56	GO:0008514: organic anion transmembrane transporter activity	1.62E-02
57	GO:0016758: transferase activity, transferring hexosyl groups	1.65E-02
58	GO:0004812: aminoacyl-tRNA ligase activity	1.71E-02
59	GO:0016829: lyase activity	1.84E-02
60	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.19E-02
61	GO:0046910: pectinesterase inhibitor activity	2.19E-02
62	GO:0000156: phosphorelay response regulator activity	2.43E-02
63	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.65E-02
64	GO:0016413: O-acetyltransferase activity	2.77E-02
65	GO:0005215: transporter activity	2.99E-02
66	GO:0008236: serine-type peptidase activity	3.36E-02
67	GO:0015238: drug transmembrane transporter activity	3.61E-02
68	GO:0016788: hydrolase activity, acting on ester bonds	3.70E-02
69	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.12E-02
70	GO:0050661: NADP binding	4.52E-02
71	GO:0030246: carbohydrate binding	4.82E-02