co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G15955

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0010055: atrichoblast differentiation	0.00E+00
3	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
4	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
5	GO:0010401: pectic galactan metabolic process	0.00E+00
6	GO:0034756: regulation of iron ion transport	0.00E+00
7	GO:0043132: NAD transport	3.71E-06
8	GO:0003006: developmental process involved in reproduction	1.23E-04
9	GO:0006511: ubiquitin-dependent protein catabolic process	1.33E-04
10	GO:0071369: cellular response to ethylene stimulus	1.70E-04
11	GO:0032107: regulation of response to nutrient levels	2.84E-04
12	GO:0035266: meristem growth	2.84E-04
13	GO:0016337: single organismal cell-cell adhesion	2.84E-04
14	GO:0007292: female gamete generation	2.84E-04
15	GO:0097502: mannosylation	2.84E-04
16	GO:0009623: response to parasitic fungus	2.84E-04
17	GO:0035352: NAD transmembrane transport	2.84E-04
18	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.84E-04
19	GO:0006680: glucosylceramide catabolic process	2.84E-04
20	GO:0006891: intra-Golgi vesicle-mediated transport	3.52E-04
21	GO:0090332: stomatal closure	4.91E-04
22	GO:0009156: ribonucleoside monophosphate biosynthetic process	6.25E-04
23	GO:0080183: response to photooxidative stress	6.25E-04
24	GO:0046939: nucleotide phosphorylation	6.25E-04
25	GO:0006024: glycosaminoglycan biosynthetic process	6.25E-04
26	GO:0048569: post-embryonic animal organ development	6.25E-04
27	GO:0052541: plant-type cell wall cellulose metabolic process	6.25E-04
28	GO:0006672: ceramide metabolic process	6.25E-04
29	GO:0051788: response to misfolded protein	6.25E-04
30	GO:0019725: cellular homeostasis	6.25E-04
31	GO:0051252: regulation of RNA metabolic process	6.25E-04
32	GO:0015012: heparan sulfate proteoglycan biosynthetic process	6.25E-04
33	GO:0006790: sulfur compound metabolic process	7.56E-04
34	GO:0055074: calcium ion homeostasis	1.01E-03
35	GO:0044375: regulation of peroxisome size	1.01E-03
36	GO:0045836: positive regulation of meiotic nuclear division	1.01E-03
37	GO:0010186: positive regulation of cellular defense response	1.01E-03
38	GO:0010272: response to silver ion	1.01E-03
39	GO:0060968: regulation of gene silencing	1.01E-03
40	GO:0071367: cellular response to brassinosteroid stimulus	1.01E-03
41	GO:0017006: protein-tetrapyrrole linkage	1.01E-03
42	GO:0046854: phosphatidylinositol phosphorylation	1.07E-03
43	GO:0010039: response to iron ion	1.07E-03
44	GO:0032877: positive regulation of DNA endoreduplication	1.45E-03
45	GO:0000187: activation of MAPK activity	1.45E-03
46	GO:0070301: cellular response to hydrogen peroxide	1.45E-03
47	GO:0009584: detection of visible light	1.45E-03
48	GO:0072334: UDP-galactose transmembrane transport	1.45E-03
49	GO:0048577: negative regulation of short-day photoperiodism, flowering	1.45E-03
50	GO:0010731: protein glutathionylation	1.45E-03
51	GO:0010104: regulation of ethylene-activated signaling pathway	1.45E-03
52	GO:0015858: nucleoside transport	1.45E-03
53	GO:0016998: cell wall macromolecule catabolic process	1.60E-03
54	GO:0009814: defense response, incompatible interaction	1.75E-03
55	GO:0030433: ubiquitin-dependent ERAD pathway	1.75E-03
56	GO:0010227: floral organ abscission	1.91E-03
57	GO:0009165: nucleotide biosynthetic process	1.94E-03
58	GO:0060548: negative regulation of cell death	1.94E-03
59	GO:0033320: UDP-D-xylose biosynthetic process	1.94E-03
60	GO:0006536: glutamate metabolic process	1.94E-03
61	GO:0042147: retrograde transport, endosome to Golgi	2.24E-03
62	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.48E-03
63	GO:0006665: sphingolipid metabolic process	2.48E-03
64	GO:0045927: positive regulation of growth	2.48E-03
65	GO:0098719: sodium ion import across plasma membrane	2.48E-03
66	GO:0046283: anthocyanin-containing compound metabolic process	2.48E-03
67	GO:0006656: phosphatidylcholine biosynthetic process	2.48E-03
68	GO:0006623: protein targeting to vacuole	3.01E-03
69	GO:0010183: pollen tube guidance	3.01E-03
70	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.06E-03
71	GO:0048827: phyllome development	3.06E-03
72	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	3.06E-03
73	GO:0048232: male gamete generation	3.06E-03
74	GO:0043248: proteasome assembly	3.06E-03
75	GO:0042732: D-xylose metabolic process	3.06E-03
76	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	3.06E-03
77	GO:0060918: auxin transport	3.06E-03
78	GO:0045040: protein import into mitochondrial outer membrane	3.06E-03
79	GO:0042176: regulation of protein catabolic process	3.06E-03
80	GO:0046686: response to cadmium ion	3.55E-03
81	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.68E-03
82	GO:0048280: vesicle fusion with Golgi apparatus	3.68E-03
83	GO:0006914: autophagy	3.89E-03
84	GO:0080027: response to herbivore	4.34E-03
85	GO:0007050: cell cycle arrest	4.34E-03
86	GO:0015937: coenzyme A biosynthetic process	4.34E-03
87	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.34E-03
88	GO:0045454: cell redox homeostasis	4.59E-03
89	GO:0009615: response to virus	4.64E-03
90	GO:0009058: biosynthetic process	4.76E-03
91	GO:2000070: regulation of response to water deprivation	5.03E-03
92	GO:0010078: maintenance of root meristem identity	5.03E-03
93	GO:0009627: systemic acquired resistance	5.19E-03
94	GO:0006950: response to stress	5.47E-03
95	GO:0001558: regulation of cell growth	5.77E-03
96	GO:0009657: plastid organization	5.77E-03
97	GO:0010204: defense response signaling pathway, resistance gene-independent	5.77E-03
98	GO:0015780: nucleotide-sugar transport	6.54E-03
99	GO:0006499: N-terminal protein myristoylation	6.68E-03
100	GO:0009407: toxin catabolic process	6.68E-03
101	GO:0051453: regulation of intracellular pH	7.35E-03
102	GO:0007166: cell surface receptor signaling pathway	7.96E-03
103	GO:0048829: root cap development	8.19E-03
104	GO:0006896: Golgi to vacuole transport	8.19E-03
105	GO:0006032: chitin catabolic process	8.19E-03
106	GO:0006839: mitochondrial transport	8.76E-03
107	GO:0010015: root morphogenesis	9.06E-03
108	GO:0072593: reactive oxygen species metabolic process	9.06E-03
109	GO:0043085: positive regulation of catalytic activity	9.06E-03
110	GO:0000272: polysaccharide catabolic process	9.06E-03
111	GO:0016925: protein sumoylation	9.96E-03
112	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	9.96E-03
113	GO:0055046: microgametogenesis	1.09E-02
114	GO:0006626: protein targeting to mitochondrion	1.09E-02
115	GO:0010102: lateral root morphogenesis	1.09E-02
116	GO:0009266: response to temperature stimulus	1.19E-02
117	GO:0006541: glutamine metabolic process	1.19E-02
118	GO:0009933: meristem structural organization	1.19E-02
119	GO:0000165: MAPK cascade	1.20E-02
120	GO:0090351: seedling development	1.29E-02
121	GO:0070588: calcium ion transmembrane transport	1.29E-02
122	GO:0009225: nucleotide-sugar metabolic process	1.29E-02
123	GO:0071732: cellular response to nitric oxide	1.29E-02
124	GO:0006486: protein glycosylation	1.34E-02
125	GO:0051603: proteolysis involved in cellular protein catabolic process	1.39E-02
126	GO:0042742: defense response to bacterium	1.42E-02
127	GO:0009116: nucleoside metabolic process	1.50E-02
128	GO:0051302: regulation of cell division	1.60E-02
129	GO:0006874: cellular calcium ion homeostasis	1.60E-02
130	GO:0046777: protein autophosphorylation	1.68E-02
131	GO:0051321: meiotic cell cycle	1.72E-02
132	GO:0080092: regulation of pollen tube growth	1.83E-02
133	GO:0010017: red or far-red light signaling pathway	1.83E-02
134	GO:0009624: response to nematode	1.91E-02
135	GO:0006012: galactose metabolic process	1.95E-02
136	GO:0071215: cellular response to abscisic acid stimulus	1.95E-02
137	GO:0018105: peptidyl-serine phosphorylation	1.97E-02
138	GO:0015031: protein transport	2.13E-02
139	GO:0006468: protein phosphorylation	2.14E-02
140	GO:0055085: transmembrane transport	2.15E-02
141	GO:0016117: carotenoid biosynthetic process	2.19E-02
142	GO:0008284: positive regulation of cell proliferation	2.19E-02
143	GO:0010051: xylem and phloem pattern formation	2.31E-02
144	GO:0010087: phloem or xylem histogenesis	2.31E-02
145	GO:0010118: stomatal movement	2.31E-02
146	GO:0006662: glycerol ether metabolic process	2.44E-02
147	GO:0006814: sodium ion transport	2.57E-02
148	GO:0048544: recognition of pollen	2.57E-02
149	GO:0055072: iron ion homeostasis	2.70E-02
150	GO:0009630: gravitropism	2.97E-02
151	GO:0030163: protein catabolic process	3.11E-02
152	GO:0071281: cellular response to iron ion	3.11E-02
153	GO:0040008: regulation of growth	3.16E-02
154	GO:0071805: potassium ion transmembrane transport	3.39E-02
155	GO:0016579: protein deubiquitination	3.54E-02
156	GO:0000910: cytokinesis	3.54E-02
157	GO:0006888: ER to Golgi vesicle-mediated transport	4.13E-02
158	GO:0018298: protein-chromophore linkage	4.45E-02
159	GO:0008219: cell death	4.45E-02
160	GO:0009817: defense response to fungus, incompatible interaction	4.45E-02
161	GO:0009735: response to cytokinin	4.57E-02
162	GO:0010311: lateral root formation	4.60E-02
163	GO:0006811: ion transport	4.76E-02
164	GO:0009738: abscisic acid-activated signaling pathway	4.90E-02
165	GO:0010043: response to zinc ion	4.93E-02
166	GO:0009910: negative regulation of flower development	4.93E-02
167	GO:0048527: lateral root development	4.93E-02
168	GO:0009631: cold acclimation	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
2	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
3	GO:0051670: inulinase activity	0.00E+00
4	GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity	0.00E+00
5	GO:0000033: alpha-1,3-mannosyltransferase activity	0.00E+00
6	GO:0008418: protein-N-terminal asparagine amidohydrolase activity	0.00E+00
7	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
8	GO:0044610: FMN transmembrane transporter activity	0.00E+00
9	GO:0051724: NAD transporter activity	3.71E-06
10	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.33E-05
11	GO:0004298: threonine-type endopeptidase activity	1.31E-04
12	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.69E-04
13	GO:0019786: Atg8-specific protease activity	2.84E-04
14	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.84E-04
15	GO:2001227: quercitrin binding	2.84E-04
16	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.84E-04
17	GO:0004105: choline-phosphate cytidylyltransferase activity	2.84E-04
18	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.84E-04
19	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.84E-04
20	GO:0051669: fructan beta-fructosidase activity	2.84E-04
21	GO:0048037: cofactor binding	2.84E-04
22	GO:0000386: second spliceosomal transesterification activity	2.84E-04
23	GO:0004348: glucosylceramidase activity	2.84E-04
24	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	2.84E-04
25	GO:0015230: FAD transmembrane transporter activity	2.84E-04
26	GO:0031219: levanase activity	2.84E-04
27	GO:2001147: camalexin binding	2.84E-04
28	GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity	2.84E-04
29	GO:0022857: transmembrane transporter activity	5.17E-04
30	GO:0008517: folic acid transporter activity	6.25E-04
31	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	6.25E-04
32	GO:0004776: succinate-CoA ligase (GDP-forming) activity	6.25E-04
33	GO:0004566: beta-glucuronidase activity	6.25E-04
34	GO:0015228: coenzyme A transmembrane transporter activity	6.25E-04
35	GO:0009883: red or far-red light photoreceptor activity	6.25E-04
36	GO:0008428: ribonuclease inhibitor activity	6.25E-04
37	GO:1990585: hydroxyproline O-arabinosyltransferase activity	6.25E-04
38	GO:0008805: carbon-monoxide oxygenase activity	6.25E-04
39	GO:0004775: succinate-CoA ligase (ADP-forming) activity	6.25E-04
40	GO:0051980: iron-nicotianamine transmembrane transporter activity	6.25E-04
41	GO:0019779: Atg8 activating enzyme activity	6.25E-04
42	GO:0008559: xenobiotic-transporting ATPase activity	6.61E-04
43	GO:0004848: ureidoglycolate hydrolase activity	1.01E-03
44	GO:0008020: G-protein coupled photoreceptor activity	1.01E-03
45	GO:0004867: serine-type endopeptidase inhibitor activity	1.07E-03
46	GO:0008061: chitin binding	1.07E-03
47	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.45E-03
48	GO:0004351: glutamate decarboxylase activity	1.45E-03
49	GO:0004749: ribose phosphate diphosphokinase activity	1.45E-03
50	GO:0019201: nucleotide kinase activity	1.45E-03
51	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.45E-03
52	GO:0009916: alternative oxidase activity	1.94E-03
53	GO:0004301: epoxide hydrolase activity	1.94E-03
54	GO:0004576: oligosaccharyl transferase activity	1.94E-03
55	GO:0019776: Atg8 ligase activity	1.94E-03
56	GO:0016004: phospholipase activator activity	1.94E-03
57	GO:0047134: protein-disulfide reductase activity	2.24E-03
58	GO:0031386: protein tag	2.48E-03
59	GO:0005459: UDP-galactose transmembrane transporter activity	2.48E-03
60	GO:0008948: oxaloacetate decarboxylase activity	2.48E-03
61	GO:0080122: AMP transmembrane transporter activity	2.48E-03
62	GO:0004791: thioredoxin-disulfide reductase activity	2.80E-03
63	GO:0048040: UDP-glucuronate decarboxylase activity	3.06E-03
64	GO:0031593: polyubiquitin binding	3.06E-03
65	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	3.06E-03
66	GO:0036402: proteasome-activating ATPase activity	3.06E-03
67	GO:0051020: GTPase binding	3.68E-03
68	GO:0015217: ADP transmembrane transporter activity	3.68E-03
69	GO:0070403: NAD+ binding	3.68E-03
70	GO:0004017: adenylate kinase activity	3.68E-03
71	GO:0005347: ATP transmembrane transporter activity	3.68E-03
72	GO:0016301: kinase activity	4.02E-03
73	GO:0005338: nucleotide-sugar transmembrane transporter activity	4.34E-03
74	GO:0009881: photoreceptor activity	4.34E-03
75	GO:0043295: glutathione binding	4.34E-03
76	GO:0004708: MAP kinase kinase activity	5.03E-03
77	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.03E-03
78	GO:0004034: aldose 1-epimerase activity	5.03E-03
79	GO:0004525: ribonuclease III activity	5.03E-03
80	GO:0005544: calcium-dependent phospholipid binding	5.03E-03
81	GO:0030247: polysaccharide binding	5.47E-03
82	GO:0015297: antiporter activity	6.32E-03
83	GO:0031490: chromatin DNA binding	7.35E-03
84	GO:0030234: enzyme regulator activity	8.19E-03
85	GO:0004568: chitinase activity	8.19E-03
86	GO:0008047: enzyme activator activity	8.19E-03
87	GO:0008327: methyl-CpG binding	9.06E-03
88	GO:0015386: potassium:proton antiporter activity	9.06E-03
89	GO:0004364: glutathione transferase activity	9.53E-03
90	GO:0015198: oligopeptide transporter activity	9.96E-03
91	GO:0000155: phosphorelay sensor kinase activity	1.09E-02
92	GO:0005388: calcium-transporting ATPase activity	1.09E-02
93	GO:0004565: beta-galactosidase activity	1.09E-02
94	GO:0004175: endopeptidase activity	1.19E-02
95	GO:0005509: calcium ion binding	1.23E-02
96	GO:0005217: intracellular ligand-gated ion channel activity	1.29E-02
97	GO:0004190: aspartic-type endopeptidase activity	1.29E-02
98	GO:0017025: TBP-class protein binding	1.29E-02
99	GO:0004970: ionotropic glutamate receptor activity	1.29E-02
100	GO:0031625: ubiquitin protein ligase binding	1.49E-02
101	GO:0043130: ubiquitin binding	1.50E-02
102	GO:0001046: core promoter sequence-specific DNA binding	1.50E-02
103	GO:0008233: peptidase activity	1.51E-02
104	GO:0005524: ATP binding	1.69E-02
105	GO:0035251: UDP-glucosyltransferase activity	1.72E-02
106	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.72E-02
107	GO:0004540: ribonuclease activity	1.72E-02
108	GO:0016874: ligase activity	1.80E-02
109	GO:0015035: protein disulfide oxidoreductase activity	1.97E-02
110	GO:0016740: transferase activity	2.03E-02
111	GO:0003727: single-stranded RNA binding	2.07E-02
112	GO:0005199: structural constituent of cell wall	2.44E-02
113	GO:0001085: RNA polymerase II transcription factor binding	2.44E-02
114	GO:0016853: isomerase activity	2.57E-02
115	GO:0010181: FMN binding	2.57E-02
116	GO:0046872: metal ion binding	2.63E-02
117	GO:0004872: receptor activity	2.70E-02
118	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.73E-02
119	GO:0005516: calmodulin binding	2.76E-02
120	GO:0004843: thiol-dependent ubiquitin-specific protease activity	2.83E-02
121	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.08E-02
122	GO:0015385: sodium:proton antiporter activity	3.11E-02
123	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.11E-02
124	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.39E-02
125	GO:0004674: protein serine/threonine kinase activity	3.98E-02
126	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.98E-02
127	GO:0004683: calmodulin-dependent protein kinase activity	4.13E-02
128	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.19E-02
129	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.45E-02
130	GO:0005096: GTPase activator activity	4.60E-02
131	GO:0003824: catalytic activity	4.85E-02
132	GO:0030145: manganese ion binding	4.93E-02
133	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.93E-02