GO Enrichment Analysis of Co-expressed Genes with
AT4G15560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 2 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.21E-06 |
| 3 | GO:0006546: glycine catabolic process | 4.21E-06 |
| 4 | GO:0007155: cell adhesion | 2.83E-05 |
| 5 | GO:0043087: regulation of GTPase activity | 6.42E-05 |
| 6 | GO:0071461: cellular response to redox state | 6.42E-05 |
| 7 | GO:1902458: positive regulation of stomatal opening | 6.42E-05 |
| 8 | GO:0010362: negative regulation of anion channel activity by blue light | 6.42E-05 |
| 9 | GO:0015969: guanosine tetraphosphate metabolic process | 6.42E-05 |
| 10 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 6.42E-05 |
| 11 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 6.42E-05 |
| 12 | GO:0031426: polycistronic mRNA processing | 6.42E-05 |
| 13 | GO:0006631: fatty acid metabolic process | 8.75E-05 |
| 14 | GO:0010143: cutin biosynthetic process | 1.23E-04 |
| 15 | GO:0010155: regulation of proton transport | 1.55E-04 |
| 16 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.55E-04 |
| 17 | GO:0080005: photosystem stoichiometry adjustment | 1.55E-04 |
| 18 | GO:0010541: acropetal auxin transport | 1.55E-04 |
| 19 | GO:0046621: negative regulation of organ growth | 2.63E-04 |
| 20 | GO:0010160: formation of animal organ boundary | 2.63E-04 |
| 21 | GO:0034051: negative regulation of plant-type hypersensitive response | 2.63E-04 |
| 22 | GO:2001141: regulation of RNA biosynthetic process | 3.82E-04 |
| 23 | GO:0010239: chloroplast mRNA processing | 3.82E-04 |
| 24 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 3.82E-04 |
| 25 | GO:0009791: post-embryonic development | 4.13E-04 |
| 26 | GO:0010583: response to cyclopentenone | 4.71E-04 |
| 27 | GO:0010027: thylakoid membrane organization | 6.32E-04 |
| 28 | GO:0009904: chloroplast accumulation movement | 6.45E-04 |
| 29 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.45E-04 |
| 30 | GO:0015995: chlorophyll biosynthetic process | 7.39E-04 |
| 31 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 7.90E-04 |
| 32 | GO:0060918: auxin transport | 7.90E-04 |
| 33 | GO:0006811: ion transport | 8.94E-04 |
| 34 | GO:0009903: chloroplast avoidance movement | 9.40E-04 |
| 35 | GO:0030488: tRNA methylation | 9.40E-04 |
| 36 | GO:0009637: response to blue light | 1.02E-03 |
| 37 | GO:0048437: floral organ development | 1.10E-03 |
| 38 | GO:2000070: regulation of response to water deprivation | 1.26E-03 |
| 39 | GO:0050821: protein stabilization | 1.26E-03 |
| 40 | GO:0016559: peroxisome fission | 1.26E-03 |
| 41 | GO:0009744: response to sucrose | 1.30E-03 |
| 42 | GO:0071482: cellular response to light stimulus | 1.44E-03 |
| 43 | GO:0015996: chlorophyll catabolic process | 1.44E-03 |
| 44 | GO:0007186: G-protein coupled receptor signaling pathway | 1.44E-03 |
| 45 | GO:0048507: meristem development | 1.62E-03 |
| 46 | GO:0051865: protein autoubiquitination | 1.62E-03 |
| 47 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 1.62E-03 |
| 48 | GO:0005982: starch metabolic process | 1.81E-03 |
| 49 | GO:0009638: phototropism | 1.81E-03 |
| 50 | GO:0010215: cellulose microfibril organization | 2.01E-03 |
| 51 | GO:0006352: DNA-templated transcription, initiation | 2.21E-03 |
| 52 | GO:0009750: response to fructose | 2.21E-03 |
| 53 | GO:0016485: protein processing | 2.21E-03 |
| 54 | GO:0008361: regulation of cell size | 2.42E-03 |
| 55 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.42E-03 |
| 56 | GO:0045037: protein import into chloroplast stroma | 2.42E-03 |
| 57 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.64E-03 |
| 58 | GO:0009725: response to hormone | 2.64E-03 |
| 59 | GO:0009767: photosynthetic electron transport chain | 2.64E-03 |
| 60 | GO:0009785: blue light signaling pathway | 2.64E-03 |
| 61 | GO:0010540: basipetal auxin transport | 2.87E-03 |
| 62 | GO:0009266: response to temperature stimulus | 2.87E-03 |
| 63 | GO:0034605: cellular response to heat | 2.87E-03 |
| 64 | GO:0010020: chloroplast fission | 2.87E-03 |
| 65 | GO:0010207: photosystem II assembly | 2.87E-03 |
| 66 | GO:0009825: multidimensional cell growth | 3.09E-03 |
| 67 | GO:0009833: plant-type primary cell wall biogenesis | 3.33E-03 |
| 68 | GO:0010025: wax biosynthetic process | 3.33E-03 |
| 69 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.33E-03 |
| 70 | GO:0006633: fatty acid biosynthetic process | 3.82E-03 |
| 71 | GO:0043622: cortical microtubule organization | 3.82E-03 |
| 72 | GO:0010431: seed maturation | 4.08E-03 |
| 73 | GO:0006306: DNA methylation | 4.08E-03 |
| 74 | GO:0007623: circadian rhythm | 4.20E-03 |
| 75 | GO:0048443: stamen development | 4.87E-03 |
| 76 | GO:0006817: phosphate ion transport | 4.87E-03 |
| 77 | GO:0042335: cuticle development | 5.43E-03 |
| 78 | GO:0010182: sugar mediated signaling pathway | 5.72E-03 |
| 79 | GO:0009741: response to brassinosteroid | 5.72E-03 |
| 80 | GO:0045489: pectin biosynthetic process | 5.72E-03 |
| 81 | GO:0009958: positive gravitropism | 5.72E-03 |
| 82 | GO:0007018: microtubule-based movement | 6.01E-03 |
| 83 | GO:0009749: response to glucose | 6.31E-03 |
| 84 | GO:0009658: chloroplast organization | 6.48E-03 |
| 85 | GO:0009639: response to red or far red light | 7.55E-03 |
| 86 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 8.88E-03 |
| 87 | GO:0016311: dephosphorylation | 9.93E-03 |
| 88 | GO:0016049: cell growth | 9.93E-03 |
| 89 | GO:0018298: protein-chromophore linkage | 1.03E-02 |
| 90 | GO:0030244: cellulose biosynthetic process | 1.03E-02 |
| 91 | GO:0000160: phosphorelay signal transduction system | 1.07E-02 |
| 92 | GO:0009813: flavonoid biosynthetic process | 1.07E-02 |
| 93 | GO:0010311: lateral root formation | 1.07E-02 |
| 94 | GO:0009832: plant-type cell wall biogenesis | 1.07E-02 |
| 95 | GO:0010218: response to far red light | 1.10E-02 |
| 96 | GO:0007568: aging | 1.14E-02 |
| 97 | GO:0048527: lateral root development | 1.14E-02 |
| 98 | GO:0010119: regulation of stomatal movement | 1.14E-02 |
| 99 | GO:0006629: lipid metabolic process | 1.19E-02 |
| 100 | GO:0009408: response to heat | 1.19E-02 |
| 101 | GO:0009926: auxin polar transport | 1.45E-02 |
| 102 | GO:0009640: photomorphogenesis | 1.45E-02 |
| 103 | GO:0042546: cell wall biogenesis | 1.50E-02 |
| 104 | GO:0006855: drug transmembrane transport | 1.62E-02 |
| 105 | GO:0006364: rRNA processing | 1.80E-02 |
| 106 | GO:0006096: glycolytic process | 2.02E-02 |
| 107 | GO:0043086: negative regulation of catalytic activity | 2.02E-02 |
| 108 | GO:0009416: response to light stimulus | 2.11E-02 |
| 109 | GO:0016569: covalent chromatin modification | 2.21E-02 |
| 110 | GO:0006396: RNA processing | 2.36E-02 |
| 111 | GO:0009845: seed germination | 2.86E-02 |
| 112 | GO:0045490: pectin catabolic process | 3.41E-02 |
| 113 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.52E-02 |
| 114 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.69E-02 |
| 115 | GO:0010468: regulation of gene expression | 3.86E-02 |
| 116 | GO:0071555: cell wall organization | 4.27E-02 |
| 117 | GO:0042254: ribosome biogenesis | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.19E-06 |
| 3 | GO:0000293: ferric-chelate reductase activity | 1.09E-05 |
| 4 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 6.42E-05 |
| 5 | GO:0004565: beta-galactosidase activity | 1.07E-04 |
| 6 | GO:0008728: GTP diphosphokinase activity | 1.55E-04 |
| 7 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 1.55E-04 |
| 8 | GO:0042389: omega-3 fatty acid desaturase activity | 1.55E-04 |
| 9 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.55E-04 |
| 10 | GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity | 2.63E-04 |
| 11 | GO:0005504: fatty acid binding | 2.63E-04 |
| 12 | GO:0009882: blue light photoreceptor activity | 3.82E-04 |
| 13 | GO:0048027: mRNA 5'-UTR binding | 3.82E-04 |
| 14 | GO:0001053: plastid sigma factor activity | 5.10E-04 |
| 15 | GO:0016987: sigma factor activity | 5.10E-04 |
| 16 | GO:0045430: chalcone isomerase activity | 5.10E-04 |
| 17 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 7.90E-04 |
| 18 | GO:2001070: starch binding | 7.90E-04 |
| 19 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 7.90E-04 |
| 20 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 7.90E-04 |
| 21 | GO:0102391: decanoate--CoA ligase activity | 9.40E-04 |
| 22 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 9.40E-04 |
| 23 | GO:0003993: acid phosphatase activity | 1.06E-03 |
| 24 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.10E-03 |
| 25 | GO:0003872: 6-phosphofructokinase activity | 1.10E-03 |
| 26 | GO:0005525: GTP binding | 1.38E-03 |
| 27 | GO:0005524: ATP binding | 1.42E-03 |
| 28 | GO:0008135: translation factor activity, RNA binding | 1.44E-03 |
| 29 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.44E-03 |
| 30 | GO:0008173: RNA methyltransferase activity | 1.44E-03 |
| 31 | GO:0030955: potassium ion binding | 1.81E-03 |
| 32 | GO:0004743: pyruvate kinase activity | 1.81E-03 |
| 33 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.64E-03 |
| 34 | GO:0000155: phosphorelay sensor kinase activity | 2.64E-03 |
| 35 | GO:0010329: auxin efflux transmembrane transporter activity | 2.64E-03 |
| 36 | GO:0031624: ubiquitin conjugating enzyme binding | 2.87E-03 |
| 37 | GO:0016491: oxidoreductase activity | 2.87E-03 |
| 38 | GO:0008017: microtubule binding | 4.39E-03 |
| 39 | GO:0016760: cellulose synthase (UDP-forming) activity | 4.60E-03 |
| 40 | GO:0030570: pectate lyase activity | 4.60E-03 |
| 41 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 5.33E-03 |
| 42 | GO:0042802: identical protein binding | 5.33E-03 |
| 43 | GO:0010181: FMN binding | 6.01E-03 |
| 44 | GO:0004872: receptor activity | 6.31E-03 |
| 45 | GO:0004518: nuclease activity | 6.92E-03 |
| 46 | GO:0016759: cellulose synthase activity | 7.55E-03 |
| 47 | GO:0016791: phosphatase activity | 7.55E-03 |
| 48 | GO:0005096: GTPase activator activity | 1.07E-02 |
| 49 | GO:0003924: GTPase activity | 1.19E-02 |
| 50 | GO:0003746: translation elongation factor activity | 1.22E-02 |
| 51 | GO:0004672: protein kinase activity | 1.51E-02 |
| 52 | GO:0035091: phosphatidylinositol binding | 1.54E-02 |
| 53 | GO:0015293: symporter activity | 1.58E-02 |
| 54 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.80E-02 |
| 55 | GO:0016887: ATPase activity | 1.85E-02 |
| 56 | GO:0003777: microtubule motor activity | 1.93E-02 |
| 57 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.07E-02 |
| 58 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.16E-02 |
| 59 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.16E-02 |
| 60 | GO:0016874: ligase activity | 2.21E-02 |
| 61 | GO:0016746: transferase activity, transferring acyl groups | 2.36E-02 |
| 62 | GO:0016829: lyase activity | 2.86E-02 |
| 63 | GO:0046910: pectinesterase inhibitor activity | 3.24E-02 |
| 64 | GO:0008194: UDP-glycosyltransferase activity | 3.69E-02 |
| 65 | GO:0000287: magnesium ion binding | 4.58E-02 |
| 66 | GO:0003682: chromatin binding | 4.83E-02 |