Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G14740

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031054: pre-miRNA processing0.00E+00
2GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
3GO:2001294: malonyl-CoA catabolic process0.00E+00
4GO:2000469: negative regulation of peroxidase activity0.00E+00
5GO:0090706: specification of plant organ position0.00E+00
6GO:0033494: ferulate metabolic process0.00E+00
7GO:2000121: regulation of removal of superoxide radicals0.00E+00
8GO:0007037: vacuolar phosphate transport0.00E+00
9GO:0009647: skotomorphogenesis5.48E-05
10GO:0006021: inositol biosynthetic process9.64E-05
11GO:0045038: protein import into chloroplast thylakoid membrane1.50E-04
12GO:1902183: regulation of shoot apical meristem development1.50E-04
13GO:0010158: abaxial cell fate specification1.50E-04
14GO:0048527: lateral root development2.60E-04
15GO:0009395: phospholipid catabolic process3.73E-04
16GO:0031426: polycistronic mRNA processing4.02E-04
17GO:0000481: maturation of 5S rRNA4.02E-04
18GO:0006659: phosphatidylserine biosynthetic process4.02E-04
19GO:1902458: positive regulation of stomatal opening4.02E-04
20GO:0034337: RNA folding4.02E-04
21GO:0010450: inflorescence meristem growth4.02E-04
22GO:0051171: regulation of nitrogen compound metabolic process4.02E-04
23GO:0010362: negative regulation of anion channel activity by blue light4.02E-04
24GO:0007155: cell adhesion4.66E-04
25GO:2000024: regulation of leaf development6.82E-04
26GO:1900871: chloroplast mRNA modification8.71E-04
27GO:0030187: melatonin biosynthetic process8.71E-04
28GO:0010541: acropetal auxin transport8.71E-04
29GO:0007154: cell communication8.71E-04
30GO:1900033: negative regulation of trichome patterning8.71E-04
31GO:0010155: regulation of proton transport8.71E-04
32GO:1903426: regulation of reactive oxygen species biosynthetic process8.71E-04
33GO:0015804: neutral amino acid transport8.71E-04
34GO:0006741: NADP biosynthetic process8.71E-04
35GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole8.71E-04
36GO:0010589: leaf proximal/distal pattern formation1.41E-03
37GO:0010160: formation of animal organ boundary1.41E-03
38GO:0006753: nucleoside phosphate metabolic process1.41E-03
39GO:0080055: low-affinity nitrate transport1.41E-03
40GO:0045493: xylan catabolic process1.41E-03
41GO:0045165: cell fate commitment1.41E-03
42GO:0019674: NAD metabolic process1.41E-03
43GO:0009405: pathogenesis1.41E-03
44GO:0010143: cutin biosynthetic process1.57E-03
45GO:0042753: positive regulation of circadian rhythm1.97E-03
46GO:0006164: purine nucleotide biosynthetic process2.04E-03
47GO:0009963: positive regulation of flavonoid biosynthetic process2.04E-03
48GO:0010255: glucose mediated signaling pathway2.04E-03
49GO:0046739: transport of virus in multicellular host2.04E-03
50GO:1990019: protein storage vacuole organization2.04E-03
51GO:0006168: adenine salvage2.04E-03
52GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.04E-03
53GO:0019363: pyridine nucleotide biosynthetic process2.04E-03
54GO:0006166: purine ribonucleoside salvage2.04E-03
55GO:0010239: chloroplast mRNA processing2.04E-03
56GO:0043481: anthocyanin accumulation in tissues in response to UV light2.04E-03
57GO:0009944: polarity specification of adaxial/abaxial axis2.18E-03
58GO:0009649: entrainment of circadian clock2.74E-03
59GO:0008295: spermidine biosynthetic process2.74E-03
60GO:0032366: intracellular sterol transport2.74E-03
61GO:0048629: trichome patterning2.74E-03
62GO:0048442: sepal development2.74E-03
63GO:0035279: mRNA cleavage involved in gene silencing by miRNA2.74E-03
64GO:0009640: photomorphogenesis2.80E-03
65GO:0009416: response to light stimulus3.07E-03
66GO:0048443: stamen development3.44E-03
67GO:0046283: anthocyanin-containing compound metabolic process3.51E-03
68GO:0009904: chloroplast accumulation movement3.51E-03
69GO:0010236: plastoquinone biosynthetic process3.51E-03
70GO:0044209: AMP salvage3.51E-03
71GO:0034052: positive regulation of plant-type hypersensitive response3.51E-03
72GO:0009585: red, far-red light phototransduction4.10E-03
73GO:0010154: fruit development4.34E-03
74GO:0009958: positive gravitropism4.34E-03
75GO:0045489: pectin biosynthetic process4.34E-03
76GO:0048831: regulation of shoot system development4.35E-03
77GO:0000741: karyogamy4.35E-03
78GO:0046855: inositol phosphate dephosphorylation4.35E-03
79GO:0006751: glutathione catabolic process4.35E-03
80GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.35E-03
81GO:0060918: auxin transport4.35E-03
82GO:0007018: microtubule-based movement4.67E-03
83GO:0009791: post-embryonic development5.01E-03
84GO:0010076: maintenance of floral meristem identity5.24E-03
85GO:0048280: vesicle fusion with Golgi apparatus5.24E-03
86GO:0009903: chloroplast avoidance movement5.24E-03
87GO:0030488: tRNA methylation5.24E-03
88GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.24E-03
89GO:0009648: photoperiodism5.24E-03
90GO:0042372: phylloquinone biosynthetic process5.24E-03
91GO:0016032: viral process5.73E-03
92GO:0010583: response to cyclopentenone5.73E-03
93GO:0015937: coenzyme A biosynthetic process6.19E-03
94GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.19E-03
95GO:0006400: tRNA modification6.19E-03
96GO:0030307: positive regulation of cell growth6.19E-03
97GO:0035196: production of miRNAs involved in gene silencing by miRNA6.19E-03
98GO:0010196: nonphotochemical quenching6.19E-03
99GO:0009639: response to red or far red light6.51E-03
100GO:0043068: positive regulation of programmed cell death7.20E-03
101GO:0010078: maintenance of root meristem identity7.20E-03
102GO:0032508: DNA duplex unwinding7.20E-03
103GO:2000070: regulation of response to water deprivation7.20E-03
104GO:0006997: nucleus organization8.26E-03
105GO:0043562: cellular response to nitrogen levels8.26E-03
106GO:0010093: specification of floral organ identity8.26E-03
107GO:0015996: chlorophyll catabolic process8.26E-03
108GO:0007186: G-protein coupled receptor signaling pathway8.26E-03
109GO:0048573: photoperiodism, flowering9.16E-03
110GO:0015995: chlorophyll biosynthetic process9.16E-03
111GO:0048507: meristem development9.38E-03
112GO:0006189: 'de novo' IMP biosynthetic process9.38E-03
113GO:0010380: regulation of chlorophyll biosynthetic process1.06E-02
114GO:0071577: zinc II ion transmembrane transport1.06E-02
115GO:0009638: phototropism1.06E-02
116GO:0010267: production of ta-siRNAs involved in RNA interference1.06E-02
117GO:0010018: far-red light signaling pathway1.06E-02
118GO:1900865: chloroplast RNA modification1.06E-02
119GO:0048354: mucilage biosynthetic process involved in seed coat development1.06E-02
120GO:0006811: ion transport1.12E-02
121GO:0048441: petal development1.18E-02
122GO:0009641: shade avoidance1.18E-02
123GO:0010192: mucilage biosynthetic process1.18E-02
124GO:0006896: Golgi to vacuole transport1.18E-02
125GO:0010119: regulation of stomatal movement1.18E-02
126GO:0071555: cell wall organization1.22E-02
127GO:0007623: circadian rhythm1.29E-02
128GO:0045490: pectin catabolic process1.29E-02
129GO:0009637: response to blue light1.29E-02
130GO:0000272: polysaccharide catabolic process1.30E-02
131GO:0009684: indoleacetic acid biosynthetic process1.30E-02
132GO:0006629: lipid metabolic process1.38E-02
133GO:0016024: CDP-diacylglycerol biosynthetic process1.44E-02
134GO:0045037: protein import into chloroplast stroma1.44E-02
135GO:0008361: regulation of cell size1.44E-02
136GO:0006790: sulfur compound metabolic process1.44E-02
137GO:0009733: response to auxin1.53E-02
138GO:0006631: fatty acid metabolic process1.54E-02
139GO:0009785: blue light signaling pathway1.57E-02
140GO:0009718: anthocyanin-containing compound biosynthetic process1.57E-02
141GO:0009767: photosynthetic electron transport chain1.57E-02
142GO:0010588: cotyledon vascular tissue pattern formation1.57E-02
143GO:0030048: actin filament-based movement1.57E-02
144GO:0009933: meristem structural organization1.71E-02
145GO:0009887: animal organ morphogenesis1.71E-02
146GO:0010540: basipetal auxin transport1.71E-02
147GO:0048467: gynoecium development1.71E-02
148GO:0048440: carpel development1.71E-02
149GO:0006541: glutamine metabolic process1.71E-02
150GO:0010207: photosystem II assembly1.71E-02
151GO:0019853: L-ascorbic acid biosynthetic process1.86E-02
152GO:0046854: phosphatidylinositol phosphorylation1.86E-02
153GO:0042343: indole glucosinolate metabolic process1.86E-02
154GO:0009825: multidimensional cell growth1.86E-02
155GO:0000162: tryptophan biosynthetic process2.01E-02
156GO:0007010: cytoskeleton organization2.16E-02
157GO:0010187: negative regulation of seed germination2.16E-02
158GO:0000027: ribosomal large subunit assembly2.16E-02
159GO:0007017: microtubule-based process2.32E-02
160GO:0003333: amino acid transmembrane transport2.48E-02
161GO:0048511: rhythmic process2.48E-02
162GO:0098542: defense response to other organism2.48E-02
163GO:0019915: lipid storage2.48E-02
164GO:0048278: vesicle docking2.48E-02
165GO:0035428: hexose transmembrane transport2.64E-02
166GO:0019748: secondary metabolic process2.64E-02
167GO:0009814: defense response, incompatible interaction2.64E-02
168GO:0009723: response to ethylene2.70E-02
169GO:0048367: shoot system development2.75E-02
170GO:0009294: DNA mediated transformation2.81E-02
171GO:0071369: cellular response to ethylene stimulus2.81E-02
172GO:0071215: cellular response to abscisic acid stimulus2.81E-02
173GO:0019722: calcium-mediated signaling2.99E-02
174GO:0042147: retrograde transport, endosome to Golgi3.16E-02
175GO:0000271: polysaccharide biosynthetic process3.34E-02
176GO:0080022: primary root development3.34E-02
177GO:0010087: phloem or xylem histogenesis3.34E-02
178GO:0009742: brassinosteroid mediated signaling pathway3.40E-02
179GO:0010305: leaf vascular tissue pattern formation3.53E-02
180GO:0010197: polar nucleus fusion3.53E-02
181GO:0010182: sugar mediated signaling pathway3.53E-02
182GO:0046323: glucose import3.53E-02
183GO:0009741: response to brassinosteroid3.53E-02
184GO:0006520: cellular amino acid metabolic process3.53E-02
185GO:0061025: membrane fusion3.71E-02
186GO:0009646: response to absence of light3.71E-02
187GO:0045892: negative regulation of transcription, DNA-templated3.76E-02
188GO:0048825: cotyledon development3.90E-02
189GO:0008654: phospholipid biosynthetic process3.90E-02
190GO:0009851: auxin biosynthetic process3.90E-02
191GO:0006623: protein targeting to vacuole3.90E-02
192GO:0010183: pollen tube guidance3.90E-02
193GO:0006891: intra-Golgi vesicle-mediated transport4.09E-02
194GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.09E-02
195GO:0010252: auxin homeostasis4.69E-02
196GO:0006464: cellular protein modification process4.69E-02
197GO:0007267: cell-cell signaling4.90E-02
RankGO TermAdjusted P value
1GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
2GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
3GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
4GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
5GO:1990534: thermospermine oxidase activity0.00E+00
6GO:0036033: mediator complex binding0.00E+00
7GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
8GO:0004059: aralkylamine N-acetyltransferase activity0.00E+00
9GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
10GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
11GO:0000293: ferric-chelate reductase activity2.14E-04
12GO:0003993: acid phosphatase activity3.25E-04
13GO:0030570: pectate lyase activity3.40E-04
14GO:0019210: kinase inhibitor activity4.02E-04
15GO:0004328: formamidase activity4.02E-04
16GO:0042736: NADH kinase activity4.02E-04
17GO:0010347: L-galactose-1-phosphate phosphatase activity4.02E-04
18GO:0047259: glucomannan 4-beta-mannosyltransferase activity4.02E-04
19GO:0010945: CoA pyrophosphatase activity4.02E-04
20GO:0008017: microtubule binding6.51E-04
21GO:0003777: microtubule motor activity8.42E-04
22GO:0015929: hexosaminidase activity8.71E-04
23GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity8.71E-04
24GO:0004563: beta-N-acetylhexosaminidase activity8.71E-04
25GO:0004512: inositol-3-phosphate synthase activity8.71E-04
26GO:0048531: beta-1,3-galactosyltransferase activity8.71E-04
27GO:0015172: acidic amino acid transmembrane transporter activity8.71E-04
28GO:0017118: lipoyltransferase activity8.71E-04
29GO:0003839: gamma-glutamylcyclotransferase activity8.71E-04
30GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity8.71E-04
31GO:0004766: spermidine synthase activity8.71E-04
32GO:0052832: inositol monophosphate 3-phosphatase activity8.71E-04
33GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity8.71E-04
34GO:0008934: inositol monophosphate 1-phosphatase activity8.71E-04
35GO:0080097: L-tryptophan:pyruvate aminotransferase activity8.71E-04
36GO:0016630: protochlorophyllide reductase activity8.71E-04
37GO:0052833: inositol monophosphate 4-phosphatase activity8.71E-04
38GO:0047372: acylglycerol lipase activity1.08E-03
39GO:0004148: dihydrolipoyl dehydrogenase activity1.41E-03
40GO:0004049: anthranilate synthase activity1.41E-03
41GO:0080054: low-affinity nitrate transmembrane transporter activity1.41E-03
42GO:0050734: hydroxycinnamoyltransferase activity1.41E-03
43GO:0003913: DNA photolyase activity1.41E-03
44GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.57E-03
45GO:0003999: adenine phosphoribosyltransferase activity2.04E-03
46GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity2.04E-03
47GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.04E-03
48GO:0009882: blue light photoreceptor activity2.04E-03
49GO:0035198: miRNA binding2.04E-03
50GO:0015175: neutral amino acid transmembrane transporter activity2.04E-03
51GO:0048027: mRNA 5'-UTR binding2.04E-03
52GO:0009044: xylan 1,4-beta-xylosidase activity2.74E-03
53GO:0046556: alpha-L-arabinofuranosidase activity2.74E-03
54GO:0080032: methyl jasmonate esterase activity2.74E-03
55GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.51E-03
56GO:0016846: carbon-sulfur lyase activity3.51E-03
57GO:0042802: identical protein binding4.08E-03
58GO:0001085: RNA polymerase II transcription factor binding4.34E-03
59GO:0000210: NAD+ diphosphatase activity4.35E-03
60GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.35E-03
61GO:0016208: AMP binding4.35E-03
62GO:0102229: amylopectin maltohydrolase activity4.35E-03
63GO:0042578: phosphoric ester hydrolase activity4.35E-03
64GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.35E-03
65GO:0016161: beta-amylase activity5.24E-03
66GO:0009927: histidine phosphotransfer kinase activity5.24E-03
67GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.24E-03
68GO:0051753: mannan synthase activity5.24E-03
69GO:0016788: hydrolase activity, acting on ester bonds5.68E-03
70GO:0043022: ribosome binding7.20E-03
71GO:0016491: oxidoreductase activity7.58E-03
72GO:0003951: NAD+ kinase activity8.26E-03
73GO:0008173: RNA methyltransferase activity8.26E-03
74GO:0030247: polysaccharide binding9.16E-03
75GO:0016829: lyase activity9.49E-03
76GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.01E-02
77GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.18E-02
78GO:0000149: SNARE binding1.41E-02
79GO:0000976: transcription regulatory region sequence-specific DNA binding1.44E-02
80GO:0010329: auxin efflux transmembrane transporter activity1.57E-02
81GO:0008081: phosphoric diester hydrolase activity1.57E-02
82GO:0031072: heat shock protein binding1.57E-02
83GO:0000155: phosphorelay sensor kinase activity1.57E-02
84GO:0003725: double-stranded RNA binding1.57E-02
85GO:0005484: SNAP receptor activity1.67E-02
86GO:0004185: serine-type carboxypeptidase activity1.67E-02
87GO:0008131: primary amine oxidase activity1.71E-02
88GO:0003774: motor activity1.71E-02
89GO:0008146: sulfotransferase activity1.86E-02
90GO:0005385: zinc ion transmembrane transporter activity2.16E-02
91GO:0005528: FK506 binding2.16E-02
92GO:0008324: cation transmembrane transporter activity2.32E-02
93GO:0051087: chaperone binding2.32E-02
94GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.64E-02
95GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.75E-02
96GO:0016874: ligase activity3.02E-02
97GO:0016746: transferase activity, transferring acyl groups3.30E-02
98GO:0008080: N-acetyltransferase activity3.53E-02
99GO:0010181: FMN binding3.71E-02
100GO:0005355: glucose transmembrane transporter activity3.71E-02
101GO:0019901: protein kinase binding3.90E-02
102GO:0016791: phosphatase activity4.69E-02
103GO:0046872: metal ion binding4.77E-02
104GO:0016722: oxidoreductase activity, oxidizing metal ions4.90E-02
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Gene type



Gene DE type