Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G14570

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903224: regulation of endodermal cell differentiation0.00E+00
2GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
3GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
4GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
5GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
6GO:0045184: establishment of protein localization0.00E+00
7GO:0031222: arabinan catabolic process0.00E+00
8GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
9GO:0000455: enzyme-directed rRNA pseudouridine synthesis0.00E+00
10GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
11GO:0009606: tropism0.00E+00
12GO:0046620: regulation of organ growth5.48E-09
13GO:0009926: auxin polar transport7.90E-07
14GO:0009451: RNA modification5.05E-06
15GO:0042793: transcription from plastid promoter7.83E-06
16GO:0009734: auxin-activated signaling pathway1.62E-05
17GO:0009658: chloroplast organization2.18E-05
18GO:0010583: response to cyclopentenone1.46E-04
19GO:2000038: regulation of stomatal complex development1.48E-04
20GO:0009790: embryo development1.76E-04
21GO:0010252: auxin homeostasis1.83E-04
22GO:0010027: thylakoid membrane organization2.48E-04
23GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic5.20E-04
24GO:0090558: plant epidermis development5.20E-04
25GO:0010063: positive regulation of trichoblast fate specification5.20E-04
26GO:0010480: microsporocyte differentiation5.20E-04
27GO:1903866: palisade mesophyll development5.20E-04
28GO:0042371: vitamin K biosynthetic process5.20E-04
29GO:0035987: endodermal cell differentiation5.20E-04
30GO:0043609: regulation of carbon utilization5.20E-04
31GO:0006436: tryptophanyl-tRNA aminoacylation5.20E-04
32GO:0034757: negative regulation of iron ion transport5.20E-04
33GO:0006419: alanyl-tRNA aminoacylation5.20E-04
34GO:0006427: histidyl-tRNA aminoacylation5.20E-04
35GO:0042659: regulation of cell fate specification5.20E-04
36GO:0070509: calcium ion import5.20E-04
37GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.20E-04
38GO:0048437: floral organ development5.46E-04
39GO:0009733: response to auxin5.94E-04
40GO:0000105: histidine biosynthetic process6.79E-04
41GO:0009793: embryo development ending in seed dormancy7.00E-04
42GO:0009657: plastid organization8.29E-04
43GO:0007389: pattern specification process8.29E-04
44GO:0000373: Group II intron splicing9.90E-04
45GO:0000902: cell morphogenesis9.90E-04
46GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.05E-03
47GO:0048255: mRNA stabilization1.12E-03
48GO:0010271: regulation of chlorophyll catabolic process1.12E-03
49GO:1902326: positive regulation of chlorophyll biosynthetic process1.12E-03
50GO:0018026: peptidyl-lysine monomethylation1.12E-03
51GO:0009662: etioplast organization1.12E-03
52GO:1900033: negative regulation of trichome patterning1.12E-03
53GO:1904143: positive regulation of carotenoid biosynthetic process1.12E-03
54GO:0080009: mRNA methylation1.12E-03
55GO:0048826: cotyledon morphogenesis1.12E-03
56GO:2000123: positive regulation of stomatal complex development1.12E-03
57GO:0060359: response to ammonium ion1.12E-03
58GO:0009630: gravitropism1.19E-03
59GO:0045036: protein targeting to chloroplast1.36E-03
60GO:0009828: plant-type cell wall loosening1.39E-03
61GO:0045037: protein import into chloroplast stroma1.80E-03
62GO:0006000: fructose metabolic process1.83E-03
63GO:0042780: tRNA 3'-end processing1.83E-03
64GO:0001578: microtubule bundle formation1.83E-03
65GO:0043157: response to cation stress1.83E-03
66GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.83E-03
67GO:0045910: negative regulation of DNA recombination1.83E-03
68GO:0010338: leaf formation1.83E-03
69GO:0080117: secondary growth1.83E-03
70GO:0090708: specification of plant organ axis polarity1.83E-03
71GO:0044210: 'de novo' CTP biosynthetic process1.83E-03
72GO:0090391: granum assembly1.83E-03
73GO:0009767: photosynthetic electron transport chain2.05E-03
74GO:0009416: response to light stimulus2.11E-03
75GO:0010207: photosystem II assembly2.31E-03
76GO:0000160: phosphorelay signal transduction system2.62E-03
77GO:2000904: regulation of starch metabolic process2.66E-03
78GO:0031048: chromatin silencing by small RNA2.66E-03
79GO:1902476: chloride transmembrane transport2.66E-03
80GO:0010071: root meristem specification2.66E-03
81GO:0051513: regulation of monopolar cell growth2.66E-03
82GO:0051639: actin filament network formation2.66E-03
83GO:0010239: chloroplast mRNA processing2.66E-03
84GO:0010306: rhamnogalacturonan II biosynthetic process2.66E-03
85GO:0044211: CTP salvage2.66E-03
86GO:0019048: modulation by virus of host morphology or physiology2.66E-03
87GO:0046739: transport of virus in multicellular host2.66E-03
88GO:0005992: trehalose biosynthetic process3.21E-03
89GO:0006418: tRNA aminoacylation for protein translation3.54E-03
90GO:0006021: inositol biosynthetic process3.58E-03
91GO:0051567: histone H3-K9 methylation3.58E-03
92GO:0044206: UMP salvage3.58E-03
93GO:0006346: methylation-dependent chromatin silencing3.58E-03
94GO:0006479: protein methylation3.58E-03
95GO:0048629: trichome patterning3.58E-03
96GO:0051764: actin crosslink formation3.58E-03
97GO:0051322: anaphase3.58E-03
98GO:0030104: water homeostasis3.58E-03
99GO:0046656: folic acid biosynthetic process3.58E-03
100GO:0006306: DNA methylation3.90E-03
101GO:0016998: cell wall macromolecule catabolic process3.90E-03
102GO:0010236: plastoquinone biosynthetic process4.59E-03
103GO:0048497: maintenance of floral organ identity4.59E-03
104GO:0009107: lipoate biosynthetic process4.59E-03
105GO:0016123: xanthophyll biosynthetic process4.59E-03
106GO:0010158: abaxial cell fate specification4.59E-03
107GO:0032876: negative regulation of DNA endoreduplication4.59E-03
108GO:0030308: negative regulation of cell growth4.59E-03
109GO:0010375: stomatal complex patterning4.59E-03
110GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.66E-03
111GO:0010082: regulation of root meristem growth4.66E-03
112GO:0010315: auxin efflux5.69E-03
113GO:0016458: gene silencing5.69E-03
114GO:0006206: pyrimidine nucleobase metabolic process5.69E-03
115GO:0018258: protein O-linked glycosylation via hydroxyproline5.69E-03
116GO:0010405: arabinogalactan protein metabolic process5.69E-03
117GO:0009959: negative gravitropism5.69E-03
118GO:0009913: epidermal cell differentiation5.69E-03
119GO:0006655: phosphatidylglycerol biosynthetic process5.69E-03
120GO:1902456: regulation of stomatal opening5.69E-03
121GO:0048831: regulation of shoot system development5.69E-03
122GO:0010358: leaf shaping5.69E-03
123GO:0016554: cytidine to uridine editing5.69E-03
124GO:0009664: plant-type cell wall organization6.16E-03
125GO:0048868: pollen tube development6.41E-03
126GO:0009736: cytokinin-activated signaling pathway6.75E-03
127GO:0009942: longitudinal axis specification6.87E-03
128GO:0048509: regulation of meristem development6.87E-03
129GO:0046654: tetrahydrofolate biosynthetic process6.87E-03
130GO:0030488: tRNA methylation6.87E-03
131GO:1901259: chloroplast rRNA processing6.87E-03
132GO:2000037: regulation of stomatal complex patterning6.87E-03
133GO:2000067: regulation of root morphogenesis6.87E-03
134GO:0071470: cellular response to osmotic stress6.87E-03
135GO:0042372: phylloquinone biosynthetic process6.87E-03
136GO:0048544: recognition of pollen6.90E-03
137GO:0048825: cotyledon development7.41E-03
138GO:0010050: vegetative phase change8.14E-03
139GO:0010444: guard mother cell differentiation8.14E-03
140GO:0006400: tRNA modification8.14E-03
141GO:0009396: folic acid-containing compound biosynthetic process8.14E-03
142GO:0006955: immune response8.14E-03
143GO:0048528: post-embryonic root development8.14E-03
144GO:0007050: cell cycle arrest8.14E-03
145GO:0009772: photosynthetic electron transport in photosystem II8.14E-03
146GO:0006821: chloride transport8.14E-03
147GO:0048367: shoot system development8.71E-03
148GO:0005975: carbohydrate metabolic process9.44E-03
149GO:0009850: auxin metabolic process9.47E-03
150GO:0009787: regulation of abscisic acid-activated signaling pathway9.47E-03
151GO:0048766: root hair initiation9.47E-03
152GO:0070413: trehalose metabolism in response to stress9.47E-03
153GO:0055075: potassium ion homeostasis9.47E-03
154GO:0048564: photosystem I assembly9.47E-03
155GO:0001522: pseudouridine synthesis9.47E-03
156GO:0010497: plasmodesmata-mediated intercellular transport1.09E-02
157GO:0032544: plastid translation1.09E-02
158GO:0006002: fructose 6-phosphate metabolic process1.09E-02
159GO:0009827: plant-type cell wall modification1.09E-02
160GO:1900865: chloroplast RNA modification1.39E-02
161GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.39E-02
162GO:0042761: very long-chain fatty acid biosynthetic process1.39E-02
163GO:0009638: phototropism1.39E-02
164GO:2000280: regulation of root development1.39E-02
165GO:0009098: leucine biosynthetic process1.39E-02
166GO:0048481: plant ovule development1.51E-02
167GO:0006535: cysteine biosynthetic process from serine1.55E-02
168GO:0030422: production of siRNA involved in RNA interference1.55E-02
169GO:0006298: mismatch repair1.55E-02
170GO:0006949: syncytium formation1.55E-02
171GO:0006259: DNA metabolic process1.55E-02
172GO:0031627: telomeric loop formation1.55E-02
173GO:0048229: gametophyte development1.72E-02
174GO:0010015: root morphogenesis1.72E-02
175GO:0006265: DNA topological change1.72E-02
176GO:0009089: lysine biosynthetic process via diaminopimelate1.72E-02
177GO:0016024: CDP-diacylglycerol biosynthetic process1.90E-02
178GO:0010582: floral meristem determinacy1.90E-02
179GO:0008361: regulation of cell size1.90E-02
180GO:0006790: sulfur compound metabolic process1.90E-02
181GO:0034599: cellular response to oxidative stress2.00E-02
182GO:0009785: blue light signaling pathway2.08E-02
183GO:0010229: inflorescence development2.08E-02
184GO:0009691: cytokinin biosynthetic process2.08E-02
185GO:0050826: response to freezing2.08E-02
186GO:0010075: regulation of meristem growth2.08E-02
187GO:0006508: proteolysis2.11E-02
188GO:0009934: regulation of meristem structural organization2.27E-02
189GO:0009739: response to gibberellin2.45E-02
190GO:0090351: seedling development2.46E-02
191GO:0070588: calcium ion transmembrane transport2.46E-02
192GO:0046854: phosphatidylinositol phosphorylation2.46E-02
193GO:0048364: root development2.64E-02
194GO:0006833: water transport2.66E-02
195GO:0051017: actin filament bundle assembly2.86E-02
196GO:0019344: cysteine biosynthetic process2.86E-02
197GO:0080147: root hair cell development2.86E-02
198GO:0006825: copper ion transport3.07E-02
199GO:0051302: regulation of cell division3.07E-02
200GO:0019953: sexual reproduction3.07E-02
201GO:0015992: proton transport3.28E-02
202GO:0031408: oxylipin biosynthetic process3.28E-02
203GO:0051603: proteolysis involved in cellular protein catabolic process3.45E-02
204GO:0006730: one-carbon metabolic process3.50E-02
205GO:0031348: negative regulation of defense response3.50E-02
206GO:0009826: unidimensional cell growth3.50E-02
207GO:0071215: cellular response to abscisic acid stimulus3.72E-02
208GO:0006357: regulation of transcription from RNA polymerase II promoter3.74E-02
209GO:0042127: regulation of cell proliferation3.95E-02
210GO:0006284: base-excision repair3.95E-02
211GO:0009306: protein secretion3.95E-02
212GO:0048316: seed development4.07E-02
213GO:0070417: cellular response to cold4.18E-02
214GO:0009723: response to ethylene4.39E-02
215GO:0000226: microtubule cytoskeleton organization4.42E-02
216GO:0008033: tRNA processing4.42E-02
217GO:0010051: xylem and phloem pattern formation4.42E-02
218GO:0010087: phloem or xylem histogenesis4.42E-02
219GO:0010118: stomatal movement4.42E-02
220GO:0048653: anther development4.42E-02
221GO:0042631: cellular response to water deprivation4.42E-02
222GO:0006662: glycerol ether metabolic process4.66E-02
223GO:0010305: leaf vascular tissue pattern formation4.66E-02
224GO:0006342: chromatin silencing4.66E-02
225GO:0009741: response to brassinosteroid4.66E-02
226GO:0009958: positive gravitropism4.66E-02
227GO:0080167: response to karrikin4.77E-02
228GO:0007059: chromosome segregation4.91E-02
229GO:0009646: response to absence of light4.91E-02
RankGO TermAdjusted P value
1GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
2GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
3GO:0004056: argininosuccinate lyase activity0.00E+00
4GO:0004401: histidinol-phosphatase activity0.00E+00
5GO:0052834: inositol monophosphate phosphatase activity0.00E+00
6GO:0071633: dihydroceramidase activity0.00E+00
7GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
8GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
9GO:0004519: endonuclease activity5.52E-06
10GO:0001872: (1->3)-beta-D-glucan binding8.56E-05
11GO:0010329: auxin efflux transmembrane transporter activity1.83E-04
12GO:0016773: phosphotransferase activity, alcohol group as acceptor2.26E-04
13GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity5.20E-04
14GO:0004156: dihydropteroate synthase activity5.20E-04
15GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity5.20E-04
16GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity5.20E-04
17GO:0004813: alanine-tRNA ligase activity5.20E-04
18GO:0004008: copper-exporting ATPase activity5.20E-04
19GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity5.20E-04
20GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.20E-04
21GO:0004830: tryptophan-tRNA ligase activity5.20E-04
22GO:0010285: L,L-diaminopimelate aminotransferase activity5.20E-04
23GO:0052381: tRNA dimethylallyltransferase activity5.20E-04
24GO:0010347: L-galactose-1-phosphate phosphatase activity5.20E-04
25GO:0004400: histidinol-phosphate transaminase activity5.20E-04
26GO:0005227: calcium activated cation channel activity5.20E-04
27GO:0042834: peptidoglycan binding5.20E-04
28GO:0016274: protein-arginine N-methyltransferase activity5.20E-04
29GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.20E-04
30GO:0004821: histidine-tRNA ligase activity5.20E-04
31GO:0003723: RNA binding7.29E-04
32GO:0008934: inositol monophosphate 1-phosphatase activity1.12E-03
33GO:0052833: inositol monophosphate 4-phosphatase activity1.12E-03
34GO:0015929: hexosaminidase activity1.12E-03
35GO:0004563: beta-N-acetylhexosaminidase activity1.12E-03
36GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.12E-03
37GO:0003988: acetyl-CoA C-acyltransferase activity1.12E-03
38GO:0009884: cytokinin receptor activity1.12E-03
39GO:0017118: lipoyltransferase activity1.12E-03
40GO:0003852: 2-isopropylmalate synthase activity1.12E-03
41GO:0016415: octanoyltransferase activity1.12E-03
42GO:0052832: inositol monophosphate 3-phosphatase activity1.12E-03
43GO:0009672: auxin:proton symporter activity1.17E-03
44GO:0004805: trehalose-phosphatase activity1.36E-03
45GO:0042781: 3'-tRNA processing endoribonuclease activity1.83E-03
46GO:0005034: osmosensor activity1.83E-03
47GO:0070330: aromatase activity1.83E-03
48GO:0017150: tRNA dihydrouridine synthase activity1.83E-03
49GO:0009982: pseudouridine synthase activity2.05E-03
50GO:0003883: CTP synthase activity2.66E-03
51GO:0035197: siRNA binding2.66E-03
52GO:0009678: hydrogen-translocating pyrophosphatase activity2.66E-03
53GO:0004222: metalloendopeptidase activity2.78E-03
54GO:0005253: anion channel activity3.58E-03
55GO:0046556: alpha-L-arabinofuranosidase activity3.58E-03
56GO:0004930: G-protein coupled receptor activity3.58E-03
57GO:0004659: prenyltransferase activity3.58E-03
58GO:0016279: protein-lysine N-methyltransferase activity3.58E-03
59GO:0004845: uracil phosphoribosyltransferase activity3.58E-03
60GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.88E-03
61GO:0004176: ATP-dependent peptidase activity3.90E-03
62GO:0018685: alkane 1-monooxygenase activity4.59E-03
63GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.59E-03
64GO:0008725: DNA-3-methyladenine glycosylase activity4.59E-03
65GO:0004888: transmembrane signaling receptor activity4.59E-03
66GO:0005275: amine transmembrane transporter activity4.59E-03
67GO:0004812: aminoacyl-tRNA ligase activity5.50E-03
68GO:0005247: voltage-gated chloride channel activity5.69E-03
69GO:2001070: starch binding5.69E-03
70GO:0030983: mismatched DNA binding5.69E-03
71GO:0004605: phosphatidate cytidylyltransferase activity5.69E-03
72GO:1990714: hydroxyproline O-galactosyltransferase activity5.69E-03
73GO:0004656: procollagen-proline 4-dioxygenase activity6.87E-03
74GO:0019900: kinase binding6.87E-03
75GO:0004124: cysteine synthase activity6.87E-03
76GO:0008195: phosphatidate phosphatase activity6.87E-03
77GO:0004849: uridine kinase activity6.87E-03
78GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity6.87E-03
79GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.87E-03
80GO:0004427: inorganic diphosphatase activity8.14E-03
81GO:0000156: phosphorelay response regulator activity9.05E-03
82GO:0004650: polygalacturonase activity9.44E-03
83GO:0008237: metallopeptidase activity1.02E-02
84GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.09E-02
85GO:0005375: copper ion transmembrane transporter activity1.09E-02
86GO:0016597: amino acid binding1.09E-02
87GO:0005215: transporter activity1.21E-02
88GO:0030247: polysaccharide binding1.36E-02
89GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.51E-02
90GO:0004673: protein histidine kinase activity1.55E-02
91GO:0005089: Rho guanyl-nucleotide exchange factor activity1.72E-02
92GO:0003691: double-stranded telomeric DNA binding1.72E-02
93GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.82E-02
94GO:0000049: tRNA binding1.90E-02
95GO:0004521: endoribonuclease activity1.90E-02
96GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.92E-02
97GO:0004022: alcohol dehydrogenase (NAD) activity2.08E-02
98GO:0004565: beta-galactosidase activity2.08E-02
99GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.08E-02
100GO:0004089: carbonate dehydratase activity2.08E-02
101GO:0031072: heat shock protein binding2.08E-02
102GO:0000155: phosphorelay sensor kinase activity2.08E-02
103GO:0005262: calcium channel activity2.08E-02
104GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.13E-02
105GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.27E-02
106GO:0004185: serine-type carboxypeptidase activity2.47E-02
107GO:0046872: metal ion binding2.64E-02
108GO:0031418: L-ascorbic acid binding2.86E-02
109GO:0042802: identical protein binding2.87E-02
110GO:0043424: protein histidine kinase binding3.07E-02
111GO:0005345: purine nucleobase transmembrane transporter activity3.07E-02
112GO:0005524: ATP binding3.26E-02
113GO:0033612: receptor serine/threonine kinase binding3.28E-02
114GO:0003964: RNA-directed DNA polymerase activity3.28E-02
115GO:0008408: 3'-5' exonuclease activity3.28E-02
116GO:0035251: UDP-glucosyltransferase activity3.28E-02
117GO:0003682: chromatin binding3.93E-02
118GO:0008514: organic anion transmembrane transporter activity3.95E-02
119GO:0047134: protein-disulfide reductase activity4.18E-02
120GO:0005525: GTP binding4.59E-02
121GO:0004527: exonuclease activity4.66E-02
122GO:0001085: RNA polymerase II transcription factor binding4.66E-02
123GO:0004791: thioredoxin-disulfide reductase activity4.91E-02
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Gene type



Gene DE type