co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G14540

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0042821: pyridoxal biosynthetic process	0.00E+00
3	GO:0031054: pre-miRNA processing	0.00E+00
4	GO:0090279: regulation of calcium ion import	0.00E+00
5	GO:0032928: regulation of superoxide anion generation	0.00E+00
6	GO:0042820: vitamin B6 catabolic process	0.00E+00
7	GO:0008298: intracellular mRNA localization	0.00E+00
8	GO:0071474: cellular hyperosmotic response	0.00E+00
9	GO:0045038: protein import into chloroplast thylakoid membrane	9.10E-05
10	GO:0009395: phospholipid catabolic process	2.36E-04
11	GO:1902458: positive regulation of stomatal opening	2.97E-04
12	GO:0034337: RNA folding	2.97E-04
13	GO:0010362: negative regulation of anion channel activity by blue light	2.97E-04
14	GO:0009443: pyridoxal 5'-phosphate salvage	2.97E-04
15	GO:0031426: polycistronic mRNA processing	2.97E-04
16	GO:0000481: maturation of 5S rRNA	2.97E-04
17	GO:0015801: aromatic amino acid transport	2.97E-04
18	GO:0043686: co-translational protein modification	2.97E-04
19	GO:0043087: regulation of GTPase activity	2.97E-04
20	GO:0016559: peroxisome fission	2.98E-04
21	GO:0016122: xanthophyll metabolic process	6.50E-04
22	GO:0010155: regulation of proton transport	6.50E-04
23	GO:1903426: regulation of reactive oxygen species biosynthetic process	6.50E-04
24	GO:0051262: protein tetramerization	6.50E-04
25	GO:0030187: melatonin biosynthetic process	6.50E-04
26	GO:0009684: indoleacetic acid biosynthetic process	7.02E-04
27	GO:0016024: CDP-diacylglycerol biosynthetic process	8.03E-04
28	GO:0010143: cutin biosynthetic process	1.02E-03
29	GO:0010207: photosystem II assembly	1.02E-03
30	GO:0009405: pathogenesis	1.05E-03
31	GO:0010589: leaf proximal/distal pattern formation	1.05E-03
32	GO:0044375: regulation of peroxisome size	1.05E-03
33	GO:0045493: xylan catabolic process	1.05E-03
34	GO:0019853: L-ascorbic acid biosynthetic process	1.14E-03
35	GO:0055114: oxidation-reduction process	1.23E-03
36	GO:0006166: purine ribonucleoside salvage	1.51E-03
37	GO:0009152: purine ribonucleotide biosynthetic process	1.51E-03
38	GO:0046653: tetrahydrofolate metabolic process	1.51E-03
39	GO:0010239: chloroplast mRNA processing	1.51E-03
40	GO:0046739: transport of virus in multicellular host	1.51E-03
41	GO:0006168: adenine salvage	1.51E-03
42	GO:0048511: rhythmic process	1.70E-03
43	GO:0009765: photosynthesis, light harvesting	2.02E-03
44	GO:0035279: mRNA cleavage involved in gene silencing by miRNA	2.02E-03
45	GO:0008295: spermidine biosynthetic process	2.02E-03
46	GO:0032366: intracellular sterol transport	2.02E-03
47	GO:0006021: inositol biosynthetic process	2.02E-03
48	GO:0031365: N-terminal protein amino acid modification	2.58E-03
49	GO:0016123: xanthophyll biosynthetic process	2.58E-03
50	GO:0044209: AMP salvage	2.58E-03
51	GO:0080110: sporopollenin biosynthetic process	2.58E-03
52	GO:0016120: carotene biosynthetic process	2.58E-03
53	GO:0010117: photoprotection	2.58E-03
54	GO:0009904: chloroplast accumulation movement	2.58E-03
55	GO:0010236: plastoquinone biosynthetic process	2.58E-03
56	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.19E-03
57	GO:0006655: phosphatidylglycerol biosynthetic process	3.19E-03
58	GO:0046855: inositol phosphate dephosphorylation	3.19E-03
59	GO:0010190: cytochrome b6f complex assembly	3.19E-03
60	GO:0009648: photoperiodism	3.84E-03
61	GO:0048280: vesicle fusion with Golgi apparatus	3.84E-03
62	GO:0009903: chloroplast avoidance movement	3.84E-03
63	GO:0044550: secondary metabolite biosynthetic process	4.36E-03
64	GO:0035196: production of miRNAs involved in gene silencing by miRNA	4.53E-03
65	GO:0015979: photosynthesis	4.70E-03
66	GO:0010027: thylakoid membrane organization	4.94E-03
67	GO:0006605: protein targeting	5.26E-03
68	GO:0010078: maintenance of root meristem identity	5.26E-03
69	GO:0032508: DNA duplex unwinding	5.26E-03
70	GO:2000070: regulation of response to water deprivation	5.26E-03
71	GO:0043562: cellular response to nitrogen levels	6.03E-03
72	GO:0022900: electron transport chain	6.03E-03
73	GO:0015996: chlorophyll catabolic process	6.03E-03
74	GO:0007186: G-protein coupled receptor signaling pathway	6.03E-03
75	GO:0006098: pentose-phosphate shunt	6.83E-03
76	GO:0048507: meristem development	6.83E-03
77	GO:0009821: alkaloid biosynthetic process	6.83E-03
78	GO:0010206: photosystem II repair	6.83E-03
79	GO:0006811: ion transport	7.11E-03
80	GO:0007568: aging	7.46E-03
81	GO:0009638: phototropism	7.67E-03
82	GO:0010267: production of ta-siRNAs involved in RNA interference	7.67E-03
83	GO:0006896: Golgi to vacuole transport	8.55E-03
84	GO:0006535: cysteine biosynthetic process from serine	8.55E-03
85	GO:0009688: abscisic acid biosynthetic process	8.55E-03
86	GO:0006790: sulfur compound metabolic process	1.04E-02
87	GO:0045037: protein import into chloroplast stroma	1.04E-02
88	GO:0006094: gluconeogenesis	1.14E-02
89	GO:0009767: photosynthetic electron transport chain	1.14E-02
90	GO:0010588: cotyledon vascular tissue pattern formation	1.14E-02
91	GO:0009785: blue light signaling pathway	1.14E-02
92	GO:0048467: gynoecium development	1.24E-02
93	GO:0006541: glutamine metabolic process	1.24E-02
94	GO:0010020: chloroplast fission	1.24E-02
95	GO:0046854: phosphatidylinositol phosphorylation	1.34E-02
96	GO:0007031: peroxisome organization	1.34E-02
97	GO:0042343: indole glucosinolate metabolic process	1.34E-02
98	GO:0000162: tryptophan biosynthetic process	1.45E-02
99	GO:0042753: positive regulation of circadian rhythm	1.45E-02
100	GO:0019344: cysteine biosynthetic process	1.56E-02
101	GO:0007017: microtubule-based process	1.68E-02
102	GO:0006508: proteolysis	1.73E-02
103	GO:0098542: defense response to other organism	1.79E-02
104	GO:0061077: chaperone-mediated protein folding	1.79E-02
105	GO:0003333: amino acid transmembrane transport	1.79E-02
106	GO:0016998: cell wall macromolecule catabolic process	1.79E-02
107	GO:0019748: secondary metabolic process	1.91E-02
108	GO:0080092: regulation of pollen tube growth	1.91E-02
109	GO:0006012: galactose metabolic process	2.03E-02
110	GO:0010584: pollen exine formation	2.16E-02
111	GO:0019722: calcium-mediated signaling	2.16E-02
112	GO:0009306: protein secretion	2.16E-02
113	GO:0016117: carotenoid biosynthetic process	2.29E-02
114	GO:0042147: retrograde transport, endosome to Golgi	2.29E-02
115	GO:0080022: primary root development	2.42E-02
116	GO:0010087: phloem or xylem histogenesis	2.42E-02
117	GO:0009958: positive gravitropism	2.55E-02
118	GO:0010305: leaf vascular tissue pattern formation	2.55E-02
119	GO:0006520: cellular amino acid metabolic process	2.55E-02
120	GO:0010182: sugar mediated signaling pathway	2.55E-02
121	GO:0007018: microtubule-based movement	2.68E-02
122	GO:0009058: biosynthetic process	2.69E-02
123	GO:0009851: auxin biosynthetic process	2.82E-02
124	GO:0006623: protein targeting to vacuole	2.82E-02
125	GO:0009791: post-embryonic development	2.82E-02
126	GO:0010183: pollen tube guidance	2.82E-02
127	GO:0048825: cotyledon development	2.82E-02
128	GO:0006891: intra-Golgi vesicle-mediated transport	2.96E-02
129	GO:0007264: small GTPase mediated signal transduction	3.10E-02
130	GO:0016032: viral process	3.10E-02
131	GO:0007623: circadian rhythm	3.52E-02
132	GO:0007267: cell-cell signaling	3.55E-02
133	GO:0016126: sterol biosynthetic process	3.85E-02
134	GO:0009627: systemic acquired resistance	4.16E-02
135	GO:0015995: chlorophyll biosynthetic process	4.32E-02
136	GO:0006888: ER to Golgi vesicle-mediated transport	4.32E-02
137	GO:0010411: xyloglucan metabolic process	4.32E-02
138	GO:0016311: dephosphorylation	4.48E-02
139	GO:0018298: protein-chromophore linkage	4.65E-02
140	GO:0000160: phosphorelay signal transduction system	4.81E-02
141	GO:0009813: flavonoid biosynthetic process	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0036033: mediator complex binding	0.00E+00
2	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
3	GO:0004059: aralkylamine N-acetyltransferase activity	0.00E+00
4	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
5	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
6	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
7	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
8	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
9	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
10	GO:0050613: delta14-sterol reductase activity	0.00E+00
11	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
12	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
13	GO:0016851: magnesium chelatase activity	3.21E-05
14	GO:0000293: ferric-chelate reductase activity	1.32E-04
15	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.32E-04
16	GO:0003993: acid phosphatase activity	1.53E-04
17	GO:0016491: oxidoreductase activity	2.68E-04
18	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.97E-04
19	GO:0005227: calcium activated cation channel activity	2.97E-04
20	GO:0009496: plastoquinol--plastocyanin reductase activity	2.97E-04
21	GO:0042586: peptide deformylase activity	2.97E-04
22	GO:0004328: formamidase activity	2.97E-04
23	GO:0004033: aldo-keto reductase (NADP) activity	2.98E-04
24	GO:0042802: identical protein binding	4.10E-04
25	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	6.50E-04
26	GO:0004766: spermidine synthase activity	6.50E-04
27	GO:0052832: inositol monophosphate 3-phosphatase activity	6.50E-04
28	GO:0015173: aromatic amino acid transmembrane transporter activity	6.50E-04
29	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	6.50E-04
30	GO:0008934: inositol monophosphate 1-phosphatase activity	6.50E-04
31	GO:0052833: inositol monophosphate 4-phosphatase activity	6.50E-04
32	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	6.50E-04
33	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	6.50E-04
34	GO:0050017: L-3-cyanoalanine synthase activity	6.50E-04
35	GO:0070402: NADPH binding	1.05E-03
36	GO:0008864: formyltetrahydrofolate deformylase activity	1.05E-03
37	GO:0004049: anthranilate synthase activity	1.05E-03
38	GO:0004180: carboxypeptidase activity	1.05E-03
39	GO:0050734: hydroxycinnamoyltransferase activity	1.05E-03
40	GO:0005504: fatty acid binding	1.05E-03
41	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.05E-03
42	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.05E-03
43	GO:0035198: miRNA binding	1.51E-03
44	GO:0048027: mRNA 5'-UTR binding	1.51E-03
45	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.51E-03
46	GO:0003999: adenine phosphoribosyltransferase activity	1.51E-03
47	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.51E-03
48	GO:0009882: blue light photoreceptor activity	1.51E-03
49	GO:0035091: phosphatidylinositol binding	1.75E-03
50	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.02E-03
51	GO:0045430: chalcone isomerase activity	2.02E-03
52	GO:0009044: xylan 1,4-beta-xylosidase activity	2.02E-03
53	GO:0046556: alpha-L-arabinofuranosidase activity	2.02E-03
54	GO:0016846: carbon-sulfur lyase activity	2.58E-03
55	GO:0004040: amidase activity	2.58E-03
56	GO:0005275: amine transmembrane transporter activity	2.58E-03
57	GO:0008080: N-acetyltransferase activity	2.77E-03
58	GO:0016788: hydrolase activity, acting on ester bonds	2.85E-03
59	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.19E-03
60	GO:0004332: fructose-bisphosphate aldolase activity	3.19E-03
61	GO:0042578: phosphoric ester hydrolase activity	3.19E-03
62	GO:0004124: cysteine synthase activity	3.84E-03
63	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.84E-03
64	GO:0005261: cation channel activity	3.84E-03
65	GO:0009927: histidine phosphotransfer kinase activity	3.84E-03
66	GO:0043022: ribosome binding	5.26E-03
67	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	5.68E-03
68	GO:0008236: serine-type peptidase activity	6.13E-03
69	GO:0016844: strictosidine synthase activity	7.67E-03
70	GO:0047372: acylglycerol lipase activity	9.46E-03
71	GO:0005089: Rho guanyl-nucleotide exchange factor activity	9.46E-03
72	GO:0004185: serine-type carboxypeptidase activity	1.06E-02
73	GO:0000155: phosphorelay sensor kinase activity	1.14E-02
74	GO:0003725: double-stranded RNA binding	1.14E-02
75	GO:0008081: phosphoric diester hydrolase activity	1.14E-02
76	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.23E-02
77	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.24E-02
78	GO:0008146: sulfotransferase activity	1.34E-02
79	GO:0005528: FK506 binding	1.56E-02
80	GO:0003777: microtubule motor activity	1.58E-02
81	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.75E-02
82	GO:0004176: ATP-dependent peptidase activity	1.79E-02
83	GO:0030570: pectate lyase activity	2.03E-02
84	GO:0016746: transferase activity, transferring acyl groups	2.10E-02
85	GO:0016740: transferase activity	2.22E-02
86	GO:0010181: FMN binding	2.68E-02
87	GO:0050662: coenzyme binding	2.68E-02
88	GO:0019825: oxygen binding	2.79E-02
89	GO:0048038: quinone binding	2.96E-02
90	GO:0016791: phosphatase activity	3.39E-02
91	GO:0020037: heme binding	3.40E-02
92	GO:0008017: microtubule binding	3.68E-02
93	GO:0004721: phosphoprotein phosphatase activity	4.32E-02
94	GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.48E-02
95	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.48E-02
96	GO:0005506: iron ion binding	4.55E-02
97	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.65E-02
98	GO:0016887: ATPase activity	4.67E-02
99	GO:0005096: GTPase activator activity	4.81E-02
100	GO:0004222: metalloendopeptidase activity	4.98E-02