Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G14240

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006982: response to lipid hydroperoxide0.00E+00
2GO:0010335: response to non-ionic osmotic stress0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0033231: carbohydrate export0.00E+00
5GO:0033494: ferulate metabolic process0.00E+00
6GO:0033468: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
7GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
8GO:0005996: monosaccharide metabolic process0.00E+00
9GO:0006573: valine metabolic process0.00E+00
10GO:0009103: lipopolysaccharide biosynthetic process0.00E+00
11GO:0009661: chromoplast organization0.00E+00
12GO:0046471: phosphatidylglycerol metabolic process0.00E+00
13GO:1905157: positive regulation of photosynthesis0.00E+00
14GO:0055114: oxidation-reduction process6.87E-06
15GO:0042823: pyridoxal phosphate biosynthetic process2.85E-05
16GO:0015995: chlorophyll biosynthetic process6.34E-05
17GO:0006636: unsaturated fatty acid biosynthetic process7.90E-05
18GO:0009704: de-etiolation2.69E-04
19GO:0019510: S-adenosylhomocysteine catabolic process2.77E-04
20GO:1902334: fructose export from vacuole to cytoplasm2.77E-04
21GO:0051180: vitamin transport2.77E-04
22GO:0015969: guanosine tetraphosphate metabolic process2.77E-04
23GO:0015755: fructose transport2.77E-04
24GO:0030974: thiamine pyrophosphate transport2.77E-04
25GO:0046467: membrane lipid biosynthetic process2.77E-04
26GO:0046900: tetrahydrofolylpolyglutamate metabolic process2.77E-04
27GO:1904966: positive regulation of vitamin E biosynthetic process2.77E-04
28GO:0010426: DNA methylation on cytosine within a CHH sequence2.77E-04
29GO:0071277: cellular response to calcium ion2.77E-04
30GO:1904964: positive regulation of phytol biosynthetic process2.77E-04
31GO:0006551: leucine metabolic process2.77E-04
32GO:0042371: vitamin K biosynthetic process2.77E-04
33GO:0071461: cellular response to redox state2.77E-04
34GO:0046167: glycerol-3-phosphate biosynthetic process2.77E-04
35GO:0043007: maintenance of rDNA2.77E-04
36GO:0032259: methylation2.91E-04
37GO:0019252: starch biosynthetic process3.05E-04
38GO:0009658: chloroplast organization4.89E-04
39GO:0042819: vitamin B6 biosynthetic process6.09E-04
40GO:0080005: photosystem stoichiometry adjustment6.09E-04
41GO:0033353: S-adenosylmethionine cycle6.09E-04
42GO:1902326: positive regulation of chlorophyll biosynthetic process6.09E-04
43GO:0010541: acropetal auxin transport6.09E-04
44GO:0006898: receptor-mediated endocytosis6.09E-04
45GO:0015893: drug transport6.09E-04
46GO:0006650: glycerophospholipid metabolic process6.09E-04
47GO:1904143: positive regulation of carotenoid biosynthetic process6.09E-04
48GO:0015790: UDP-xylose transport6.09E-04
49GO:0030388: fructose 1,6-bisphosphate metabolic process6.09E-04
50GO:0006094: gluconeogenesis8.26E-04
51GO:0044550: secondary metabolite biosynthetic process8.31E-04
52GO:0010207: photosystem II assembly9.28E-04
53GO:0006000: fructose metabolic process9.88E-04
54GO:0046168: glycerol-3-phosphate catabolic process9.88E-04
55GO:0010160: formation of animal organ boundary9.88E-04
56GO:0044375: regulation of peroxisome size9.88E-04
57GO:0071555: cell wall organization1.23E-03
58GO:0009152: purine ribonucleotide biosynthetic process1.41E-03
59GO:0046653: tetrahydrofolate metabolic process1.41E-03
60GO:0043481: anthocyanin accumulation in tissues in response to UV light1.41E-03
61GO:0006072: glycerol-3-phosphate metabolic process1.41E-03
62GO:0008615: pyridoxine biosynthetic process1.41E-03
63GO:2001141: regulation of RNA biosynthetic process1.41E-03
64GO:0071484: cellular response to light intensity1.41E-03
65GO:0015689: molybdate ion transport1.89E-03
66GO:0009765: photosynthesis, light harvesting1.89E-03
67GO:0045727: positive regulation of translation1.89E-03
68GO:0015994: chlorophyll metabolic process1.89E-03
69GO:0010600: regulation of auxin biosynthetic process1.89E-03
70GO:0071483: cellular response to blue light1.89E-03
71GO:0010021: amylopectin biosynthetic process1.89E-03
72GO:0006465: signal peptide processing2.41E-03
73GO:0016120: carotene biosynthetic process2.41E-03
74GO:0009904: chloroplast accumulation movement2.41E-03
75GO:0035434: copper ion transmembrane transport2.41E-03
76GO:0009107: lipoate biosynthetic process2.41E-03
77GO:0016123: xanthophyll biosynthetic process2.41E-03
78GO:0009646: response to absence of light2.70E-03
79GO:0060918: auxin transport2.98E-03
80GO:1902456: regulation of stomatal opening2.98E-03
81GO:0009643: photosynthetic acclimation2.98E-03
82GO:0007264: small GTPase mediated signal transduction3.31E-03
83GO:0009082: branched-chain amino acid biosynthetic process3.58E-03
84GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.58E-03
85GO:0017148: negative regulation of translation3.58E-03
86GO:0009099: valine biosynthetic process3.58E-03
87GO:0009903: chloroplast avoidance movement3.58E-03
88GO:0010189: vitamin E biosynthetic process3.58E-03
89GO:0009854: oxidative photosynthetic carbon pathway3.58E-03
90GO:0010019: chloroplast-nucleus signaling pathway3.58E-03
91GO:0015979: photosynthesis4.03E-03
92GO:1900056: negative regulation of leaf senescence4.23E-03
93GO:1900057: positive regulation of leaf senescence4.23E-03
94GO:0010161: red light signaling pathway4.23E-03
95GO:0010928: regulation of auxin mediated signaling pathway4.90E-03
96GO:0008610: lipid biosynthetic process4.90E-03
97GO:0042255: ribosome assembly4.90E-03
98GO:0006353: DNA-templated transcription, termination4.90E-03
99GO:0050821: protein stabilization4.90E-03
100GO:0000105: histidine biosynthetic process4.90E-03
101GO:0009231: riboflavin biosynthetic process4.90E-03
102GO:0016559: peroxisome fission4.90E-03
103GO:0010411: xyloglucan metabolic process5.26E-03
104GO:0009932: cell tip growth5.62E-03
105GO:0006002: fructose 6-phosphate metabolic process5.62E-03
106GO:0071482: cellular response to light stimulus5.62E-03
107GO:0009097: isoleucine biosynthetic process5.62E-03
108GO:0009657: plastid organization5.62E-03
109GO:0032544: plastid translation5.62E-03
110GO:2000031: regulation of salicylic acid mediated signaling pathway5.62E-03
111GO:0030244: cellulose biosynthetic process5.83E-03
112GO:0010206: photosystem II repair6.37E-03
113GO:0006098: pentose-phosphate shunt6.37E-03
114GO:0090333: regulation of stomatal closure6.37E-03
115GO:0007623: circadian rhythm6.39E-03
116GO:0010205: photoinhibition7.15E-03
117GO:0010267: production of ta-siRNAs involved in RNA interference7.15E-03
118GO:0009098: leucine biosynthetic process7.15E-03
119GO:0048354: mucilage biosynthetic process involved in seed coat development7.15E-03
120GO:0010380: regulation of chlorophyll biosynthetic process7.15E-03
121GO:0009853: photorespiration7.40E-03
122GO:0016051: carbohydrate biosynthetic process7.40E-03
123GO:0034599: cellular response to oxidative stress7.73E-03
124GO:0010192: mucilage biosynthetic process7.97E-03
125GO:0006995: cellular response to nitrogen starvation7.97E-03
126GO:0009688: abscisic acid biosynthetic process7.97E-03
127GO:0043069: negative regulation of programmed cell death7.97E-03
128GO:0009641: shade avoidance7.97E-03
129GO:0006631: fatty acid metabolic process8.79E-03
130GO:0043085: positive regulation of catalytic activity8.82E-03
131GO:0006352: DNA-templated transcription, initiation8.82E-03
132GO:0000272: polysaccharide catabolic process8.82E-03
133GO:0009750: response to fructose8.82E-03
134GO:0018119: peptidyl-cysteine S-nitrosylation8.82E-03
135GO:0010114: response to red light9.55E-03
136GO:0008361: regulation of cell size9.70E-03
137GO:0002213: defense response to insect9.70E-03
138GO:0016925: protein sumoylation9.70E-03
139GO:0042546: cell wall biogenesis9.94E-03
140GO:0005986: sucrose biosynthetic process1.06E-02
141GO:0018107: peptidyl-threonine phosphorylation1.06E-02
142GO:0009725: response to hormone1.06E-02
143GO:0034605: cellular response to heat1.16E-02
144GO:0010143: cutin biosynthetic process1.16E-02
145GO:0006541: glutamine metabolic process1.16E-02
146GO:0007015: actin filament organization1.16E-02
147GO:0019253: reductive pentose-phosphate cycle1.16E-02
148GO:0010223: secondary shoot formation1.16E-02
149GO:0010540: basipetal auxin transport1.16E-02
150GO:0042538: hyperosmotic salinity response1.20E-02
151GO:0007031: peroxisome organization1.25E-02
152GO:0042343: indole glucosinolate metabolic process1.25E-02
153GO:0009585: red, far-red light phototransduction1.29E-02
154GO:0006979: response to oxidative stress1.34E-02
155GO:0006863: purine nucleobase transport1.35E-02
156GO:0009833: plant-type primary cell wall biogenesis1.35E-02
157GO:0019762: glucosinolate catabolic process1.35E-02
158GO:0006857: oligopeptide transport1.38E-02
159GO:0006406: mRNA export from nucleus1.46E-02
160GO:0043086: negative regulation of catalytic activity1.53E-02
161GO:0019953: sexual reproduction1.56E-02
162GO:0009695: jasmonic acid biosynthetic process1.56E-02
163GO:0006825: copper ion transport1.56E-02
164GO:0061077: chaperone-mediated protein folding1.67E-02
165GO:0031408: oxylipin biosynthetic process1.67E-02
166GO:0006306: DNA methylation1.67E-02
167GO:0051260: protein homooligomerization1.67E-02
168GO:0098542: defense response to other organism1.67E-02
169GO:0030245: cellulose catabolic process1.78E-02
170GO:0010017: red or far-red light signaling pathway1.78E-02
171GO:2000022: regulation of jasmonic acid mediated signaling pathway1.78E-02
172GO:0030433: ubiquitin-dependent ERAD pathway1.78E-02
173GO:0006730: one-carbon metabolic process1.78E-02
174GO:0019748: secondary metabolic process1.78E-02
175GO:0006396: RNA processing1.90E-02
176GO:0006817: phosphate ion transport2.01E-02
177GO:0048443: stamen development2.01E-02
178GO:0019722: calcium-mediated signaling2.01E-02
179GO:0009306: protein secretion2.01E-02
180GO:0070417: cellular response to cold2.13E-02
181GO:0042631: cellular response to water deprivation2.25E-02
182GO:0016042: lipid catabolic process2.31E-02
183GO:0009958: positive gravitropism2.37E-02
184GO:0006520: cellular amino acid metabolic process2.37E-02
185GO:0045489: pectin biosynthetic process2.37E-02
186GO:0006662: glycerol ether metabolic process2.37E-02
187GO:0010182: sugar mediated signaling pathway2.37E-02
188GO:0007059: chromosome segregation2.50E-02
189GO:0008654: phospholipid biosynthetic process2.63E-02
190GO:0031047: gene silencing by RNA2.89E-02
191GO:0032502: developmental process2.89E-02
192GO:0006633: fatty acid biosynthetic process2.90E-02
193GO:0009639: response to red or far red light3.16E-02
194GO:0007267: cell-cell signaling3.30E-02
195GO:0051607: defense response to virus3.44E-02
196GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.73E-02
197GO:0008380: RNA splicing3.79E-02
198GO:0009414: response to water deprivation3.89E-02
199GO:0042742: defense response to bacterium4.02E-02
200GO:0018298: protein-chromophore linkage4.33E-02
201GO:0006499: N-terminal protein myristoylation4.64E-02
202GO:0009407: toxin catabolic process4.64E-02
203GO:0010218: response to far red light4.64E-02
204GO:0009910: negative regulation of flower development4.79E-02
205GO:0048527: lateral root development4.79E-02
RankGO TermAdjusted P value
1GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
2GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
3GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
4GO:0045550: geranylgeranyl reductase activity0.00E+00
5GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
6GO:0008690: 3-deoxy-manno-octulosonate cytidylyltransferase activity0.00E+00
7GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
8GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
9GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
10GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
11GO:0004768: stearoyl-CoA 9-desaturase activity0.00E+00
12GO:0015284: fructose uniporter activity0.00E+00
13GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
14GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
15GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
16GO:0018708: thiol S-methyltransferase activity3.53E-06
17GO:0004373: glycogen (starch) synthase activity1.27E-05
18GO:0009011: starch synthase activity5.13E-05
19GO:0019899: enzyme binding2.13E-04
20GO:0051287: NAD binding2.56E-04
21GO:0046906: tetrapyrrole binding2.77E-04
22GO:0090422: thiamine pyrophosphate transporter activity2.77E-04
23GO:0004013: adenosylhomocysteinase activity2.77E-04
24GO:0080132: fatty acid alpha-hydroxylase activity2.77E-04
25GO:0016618: hydroxypyruvate reductase activity2.77E-04
26GO:0003984: acetolactate synthase activity2.77E-04
27GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity2.77E-04
28GO:0008242: omega peptidase activity2.77E-04
29GO:0010313: phytochrome binding2.77E-04
30GO:0003879: ATP phosphoribosyltransferase activity2.77E-04
31GO:0035671: enone reductase activity2.77E-04
32GO:0071949: FAD binding3.99E-04
33GO:0008168: methyltransferase activity4.56E-04
34GO:0033201: alpha-1,4-glucan synthase activity6.09E-04
35GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity6.09E-04
36GO:0005353: fructose transmembrane transporter activity6.09E-04
37GO:0034722: gamma-glutamyl-peptidase activity6.09E-04
38GO:0005464: UDP-xylose transmembrane transporter activity6.09E-04
39GO:0008728: GTP diphosphokinase activity6.09E-04
40GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity6.09E-04
41GO:0003862: 3-isopropylmalate dehydrogenase activity6.09E-04
42GO:0010297: heteropolysaccharide binding6.09E-04
43GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity6.09E-04
44GO:0016491: oxidoreductase activity7.04E-04
45GO:0004565: beta-galactosidase activity8.26E-04
46GO:0010277: chlorophyllide a oxygenase [overall] activity9.88E-04
47GO:0050734: hydroxycinnamoyltransferase activity9.88E-04
48GO:0016992: lipoate synthase activity9.88E-04
49GO:0003935: GTP cyclohydrolase II activity9.88E-04
50GO:0030267: glyoxylate reductase (NADP) activity9.88E-04
51GO:0016742: hydroxymethyl-, formyl- and related transferase activity9.88E-04
52GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity9.88E-04
53GO:0008864: formyltetrahydrofolate deformylase activity9.88E-04
54GO:0019948: SUMO activating enzyme activity9.88E-04
55GO:0048027: mRNA 5'-UTR binding1.41E-03
56GO:0022890: inorganic cation transmembrane transporter activity1.41E-03
57GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.41E-03
58GO:0042802: identical protein binding1.76E-03
59GO:0080032: methyl jasmonate esterase activity1.89E-03
60GO:0016987: sigma factor activity1.89E-03
61GO:0015098: molybdate ion transmembrane transporter activity1.89E-03
62GO:0043495: protein anchor1.89E-03
63GO:0001053: plastid sigma factor activity1.89E-03
64GO:0003727: single-stranded RNA binding1.99E-03
65GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.41E-03
66GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.41E-03
67GO:0080030: methyl indole-3-acetate esterase activity2.98E-03
68GO:0004332: fructose-bisphosphate aldolase activity2.98E-03
69GO:0035673: oligopeptide transmembrane transporter activity2.98E-03
70GO:0042578: phosphoric ester hydrolase activity2.98E-03
71GO:0016762: xyloglucan:xyloglucosyl transferase activity3.09E-03
72GO:0004602: glutathione peroxidase activity3.58E-03
73GO:0003886: DNA (cytosine-5-)-methyltransferase activity3.58E-03
74GO:0052689: carboxylic ester hydrolase activity3.83E-03
75GO:0016798: hydrolase activity, acting on glycosyl bonds5.26E-03
76GO:0005375: copper ion transmembrane transporter activity5.62E-03
77GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.62E-03
78GO:0015386: potassium:proton antiporter activity8.82E-03
79GO:0015198: oligopeptide transporter activity9.70E-03
80GO:0010329: auxin efflux transmembrane transporter activity1.06E-02
81GO:0005315: inorganic phosphate transmembrane transporter activity1.06E-02
82GO:0031072: heat shock protein binding1.06E-02
83GO:0051119: sugar transmembrane transporter activity1.25E-02
84GO:0005506: iron ion binding1.29E-02
85GO:0003690: double-stranded DNA binding1.34E-02
86GO:0016298: lipase activity1.34E-02
87GO:0005528: FK506 binding1.46E-02
88GO:0005345: purine nucleobase transmembrane transporter activity1.56E-02
89GO:0015079: potassium ion transmembrane transporter activity1.56E-02
90GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.78E-02
91GO:0016779: nucleotidyltransferase activity1.78E-02
92GO:0008810: cellulase activity1.89E-02
93GO:0016760: cellulose synthase (UDP-forming) activity1.89E-02
94GO:0022891: substrate-specific transmembrane transporter activity1.89E-02
95GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.03E-02
96GO:0047134: protein-disulfide reductase activity2.13E-02
97GO:0019843: rRNA binding2.31E-02
98GO:0008080: N-acetyltransferase activity2.37E-02
99GO:0005507: copper ion binding2.41E-02
100GO:0050662: coenzyme binding2.50E-02
101GO:0015299: solute:proton antiporter activity2.50E-02
102GO:0004791: thioredoxin-disulfide reductase activity2.50E-02
103GO:0004872: receptor activity2.63E-02
104GO:0004518: nuclease activity2.89E-02
105GO:0046910: pectinesterase inhibitor activity2.97E-02
106GO:0005525: GTP binding2.98E-02
107GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.02E-02
108GO:0016759: cellulose synthase activity3.16E-02
109GO:0016722: oxidoreductase activity, oxidizing metal ions3.30E-02
110GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.30E-02
111GO:0016597: amino acid binding3.44E-02
112GO:0016168: chlorophyll binding3.73E-02
113GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.17E-02
114GO:0016757: transferase activity, transferring glycosyl groups4.26E-02
115GO:0005515: protein binding4.38E-02
116GO:0003824: catalytic activity4.60E-02
117GO:0000287: magnesium ion binding4.81E-02
118GO:0016788: hydrolase activity, acting on ester bonds4.99E-02
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Gene type



Gene DE type