GO Enrichment Analysis of Co-expressed Genes with
AT4G13720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015739: sialic acid transport | 0.00E+00 |
| 2 | GO:0010412: mannan metabolic process | 0.00E+00 |
| 3 | GO:0071311: cellular response to acetate | 0.00E+00 |
| 4 | GO:0015843: methylammonium transport | 0.00E+00 |
| 5 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 6 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 7 | GO:0071260: cellular response to mechanical stimulus | 0.00E+00 |
| 8 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 9 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 10 | GO:0009099: valine biosynthetic process | 6.84E-05 |
| 11 | GO:0009082: branched-chain amino acid biosynthetic process | 6.84E-05 |
| 12 | GO:0009097: isoleucine biosynthetic process | 1.47E-04 |
| 13 | GO:0043266: regulation of potassium ion transport | 1.60E-04 |
| 14 | GO:0006659: phosphatidylserine biosynthetic process | 1.60E-04 |
| 15 | GO:1902265: abscisic acid homeostasis | 1.60E-04 |
| 16 | GO:2000021: regulation of ion homeostasis | 1.60E-04 |
| 17 | GO:0006177: GMP biosynthetic process | 1.60E-04 |
| 18 | GO:0010450: inflorescence meristem growth | 1.60E-04 |
| 19 | GO:0051171: regulation of nitrogen compound metabolic process | 1.60E-04 |
| 20 | GO:0071028: nuclear mRNA surveillance | 1.60E-04 |
| 21 | GO:0034475: U4 snRNA 3'-end processing | 3.65E-04 |
| 22 | GO:0031648: protein destabilization | 3.65E-04 |
| 23 | GO:0031125: rRNA 3'-end processing | 3.65E-04 |
| 24 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 3.65E-04 |
| 25 | GO:0010115: regulation of abscisic acid biosynthetic process | 3.65E-04 |
| 26 | GO:1900871: chloroplast mRNA modification | 3.65E-04 |
| 27 | GO:0070475: rRNA base methylation | 5.97E-04 |
| 28 | GO:0006760: folic acid-containing compound metabolic process | 5.97E-04 |
| 29 | GO:0045165: cell fate commitment | 5.97E-04 |
| 30 | GO:0006753: nucleoside phosphate metabolic process | 5.97E-04 |
| 31 | GO:0016075: rRNA catabolic process | 5.97E-04 |
| 32 | GO:0071230: cellular response to amino acid stimulus | 5.97E-04 |
| 33 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 5.97E-04 |
| 34 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 5.97E-04 |
| 35 | GO:0031022: nuclear migration along microfilament | 5.97E-04 |
| 36 | GO:0051127: positive regulation of actin nucleation | 5.97E-04 |
| 37 | GO:0010187: negative regulation of seed germination | 6.05E-04 |
| 38 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 7.98E-04 |
| 39 | GO:0043572: plastid fission | 8.53E-04 |
| 40 | GO:0006164: purine nucleotide biosynthetic process | 8.53E-04 |
| 41 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 8.53E-04 |
| 42 | GO:0010255: glucose mediated signaling pathway | 8.53E-04 |
| 43 | GO:0015696: ammonium transport | 8.53E-04 |
| 44 | GO:0032981: mitochondrial respiratory chain complex I assembly | 8.53E-04 |
| 45 | GO:0010087: phloem or xylem histogenesis | 1.09E-03 |
| 46 | GO:0009740: gibberellic acid mediated signaling pathway | 1.10E-03 |
| 47 | GO:0046355: mannan catabolic process | 1.13E-03 |
| 48 | GO:0072488: ammonium transmembrane transport | 1.13E-03 |
| 49 | GO:0009902: chloroplast relocation | 1.13E-03 |
| 50 | GO:0046656: folic acid biosynthetic process | 1.13E-03 |
| 51 | GO:0006021: inositol biosynthetic process | 1.13E-03 |
| 52 | GO:0010182: sugar mediated signaling pathway | 1.17E-03 |
| 53 | GO:1902183: regulation of shoot apical meristem development | 1.43E-03 |
| 54 | GO:0046785: microtubule polymerization | 1.43E-03 |
| 55 | GO:0010158: abaxial cell fate specification | 1.43E-03 |
| 56 | GO:0032876: negative regulation of DNA endoreduplication | 1.43E-03 |
| 57 | GO:0009635: response to herbicide | 1.76E-03 |
| 58 | GO:0045962: positive regulation of development, heterochronic | 1.76E-03 |
| 59 | GO:0006561: proline biosynthetic process | 1.76E-03 |
| 60 | GO:0000741: karyogamy | 1.76E-03 |
| 61 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.76E-03 |
| 62 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.76E-03 |
| 63 | GO:0009959: negative gravitropism | 1.76E-03 |
| 64 | GO:0046654: tetrahydrofolate biosynthetic process | 2.11E-03 |
| 65 | GO:0009903: chloroplast avoidance movement | 2.11E-03 |
| 66 | GO:0009648: photoperiodism | 2.11E-03 |
| 67 | GO:0042372: phylloquinone biosynthetic process | 2.11E-03 |
| 68 | GO:0010029: regulation of seed germination | 2.18E-03 |
| 69 | GO:0007623: circadian rhythm | 2.37E-03 |
| 70 | GO:0010161: red light signaling pathway | 2.48E-03 |
| 71 | GO:0015937: coenzyme A biosynthetic process | 2.48E-03 |
| 72 | GO:0010078: maintenance of root meristem identity | 2.88E-03 |
| 73 | GO:0009704: de-etiolation | 2.88E-03 |
| 74 | GO:0032875: regulation of DNA endoreduplication | 2.88E-03 |
| 75 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.88E-03 |
| 76 | GO:0010100: negative regulation of photomorphogenesis | 3.29E-03 |
| 77 | GO:0006997: nucleus organization | 3.29E-03 |
| 78 | GO:0043562: cellular response to nitrogen levels | 3.29E-03 |
| 79 | GO:0010093: specification of floral organ identity | 3.29E-03 |
| 80 | GO:0010099: regulation of photomorphogenesis | 3.29E-03 |
| 81 | GO:0006002: fructose 6-phosphate metabolic process | 3.29E-03 |
| 82 | GO:0006783: heme biosynthetic process | 3.72E-03 |
| 83 | GO:0006189: 'de novo' IMP biosynthetic process | 3.72E-03 |
| 84 | GO:0015780: nucleotide-sugar transport | 3.72E-03 |
| 85 | GO:0051865: protein autoubiquitination | 3.72E-03 |
| 86 | GO:2000024: regulation of leaf development | 3.72E-03 |
| 87 | GO:0009098: leucine biosynthetic process | 4.17E-03 |
| 88 | GO:1900865: chloroplast RNA modification | 4.17E-03 |
| 89 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.17E-03 |
| 90 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.17E-03 |
| 91 | GO:0009638: phototropism | 4.17E-03 |
| 92 | GO:0009688: abscisic acid biosynthetic process | 4.64E-03 |
| 93 | GO:0009299: mRNA transcription | 4.64E-03 |
| 94 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.12E-03 |
| 95 | GO:0006816: calcium ion transport | 5.12E-03 |
| 96 | GO:0009750: response to fructose | 5.12E-03 |
| 97 | GO:0009684: indoleacetic acid biosynthetic process | 5.12E-03 |
| 98 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.62E-03 |
| 99 | GO:0010588: cotyledon vascular tissue pattern formation | 6.14E-03 |
| 100 | GO:0030036: actin cytoskeleton organization | 6.14E-03 |
| 101 | GO:0009725: response to hormone | 6.14E-03 |
| 102 | GO:0030048: actin filament-based movement | 6.14E-03 |
| 103 | GO:0010020: chloroplast fission | 6.67E-03 |
| 104 | GO:0009933: meristem structural organization | 6.67E-03 |
| 105 | GO:0048467: gynoecium development | 6.67E-03 |
| 106 | GO:0090351: seedling development | 7.22E-03 |
| 107 | GO:0010030: positive regulation of seed germination | 7.22E-03 |
| 108 | GO:0010025: wax biosynthetic process | 7.79E-03 |
| 109 | GO:0009624: response to nematode | 8.37E-03 |
| 110 | GO:0005992: trehalose biosynthetic process | 8.38E-03 |
| 111 | GO:0007010: cytoskeleton organization | 8.38E-03 |
| 112 | GO:0009944: polarity specification of adaxial/abaxial axis | 8.38E-03 |
| 113 | GO:0006874: cellular calcium ion homeostasis | 8.97E-03 |
| 114 | GO:0035428: hexose transmembrane transport | 1.02E-02 |
| 115 | GO:0009686: gibberellin biosynthetic process | 1.09E-02 |
| 116 | GO:0019722: calcium-mediated signaling | 1.15E-02 |
| 117 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.22E-02 |
| 118 | GO:0070417: cellular response to cold | 1.22E-02 |
| 119 | GO:0080022: primary root development | 1.29E-02 |
| 120 | GO:0034220: ion transmembrane transport | 1.29E-02 |
| 121 | GO:0042631: cellular response to water deprivation | 1.29E-02 |
| 122 | GO:0010197: polar nucleus fusion | 1.36E-02 |
| 123 | GO:0010154: fruit development | 1.36E-02 |
| 124 | GO:0046323: glucose import | 1.36E-02 |
| 125 | GO:0009958: positive gravitropism | 1.36E-02 |
| 126 | GO:0040008: regulation of growth | 1.38E-02 |
| 127 | GO:0045490: pectin catabolic process | 1.45E-02 |
| 128 | GO:0009791: post-embryonic development | 1.50E-02 |
| 129 | GO:0008654: phospholipid biosynthetic process | 1.50E-02 |
| 130 | GO:0009851: auxin biosynthetic process | 1.50E-02 |
| 131 | GO:0048825: cotyledon development | 1.50E-02 |
| 132 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.58E-02 |
| 133 | GO:0009735: response to cytokinin | 1.64E-02 |
| 134 | GO:0010583: response to cyclopentenone | 1.65E-02 |
| 135 | GO:0010468: regulation of gene expression | 1.73E-02 |
| 136 | GO:0010090: trichome morphogenesis | 1.73E-02 |
| 137 | GO:0006464: cellular protein modification process | 1.81E-02 |
| 138 | GO:0009416: response to light stimulus | 1.84E-02 |
| 139 | GO:0048573: photoperiodism, flowering | 2.30E-02 |
| 140 | GO:0015995: chlorophyll biosynthetic process | 2.30E-02 |
| 141 | GO:0000160: phosphorelay signal transduction system | 2.56E-02 |
| 142 | GO:0048366: leaf development | 2.65E-02 |
| 143 | GO:0048527: lateral root development | 2.74E-02 |
| 144 | GO:0009910: negative regulation of flower development | 2.74E-02 |
| 145 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.89E-02 |
| 146 | GO:0009637: response to blue light | 2.93E-02 |
| 147 | GO:0008283: cell proliferation | 3.51E-02 |
| 148 | GO:0008643: carbohydrate transport | 3.71E-02 |
| 149 | GO:0009965: leaf morphogenesis | 3.81E-02 |
| 150 | GO:0031347: regulation of defense response | 4.02E-02 |
| 151 | GO:0042538: hyperosmotic salinity response | 4.12E-02 |
| 152 | GO:0009585: red, far-red light phototransduction | 4.34E-02 |
| 153 | GO:0009736: cytokinin-activated signaling pathway | 4.34E-02 |
| 154 | GO:0006468: protein phosphorylation | 4.49E-02 |
| 155 | GO:0006417: regulation of translation | 4.66E-02 |
| 156 | GO:0009909: regulation of flower development | 4.66E-02 |
| 157 | GO:0006096: glycolytic process | 4.88E-02 |
| 158 | GO:0048367: shoot system development | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0015276: ligand-gated ion channel activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 5 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 6 | GO:0052907: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity | 0.00E+00 |
| 7 | GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity | 0.00E+00 |
| 8 | GO:0015136: sialic acid transmembrane transporter activity | 0.00E+00 |
| 9 | GO:0008066: glutamate receptor activity | 1.60E-04 |
| 10 | GO:0010313: phytochrome binding | 1.60E-04 |
| 11 | GO:0010945: CoA pyrophosphatase activity | 1.60E-04 |
| 12 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.60E-04 |
| 13 | GO:0003984: acetolactate synthase activity | 1.60E-04 |
| 14 | GO:0017118: lipoyltransferase activity | 3.65E-04 |
| 15 | GO:0015929: hexosaminidase activity | 3.65E-04 |
| 16 | GO:0004563: beta-N-acetylhexosaminidase activity | 3.65E-04 |
| 17 | GO:0004512: inositol-3-phosphate synthase activity | 3.65E-04 |
| 18 | GO:0043425: bHLH transcription factor binding | 3.65E-04 |
| 19 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 3.65E-04 |
| 20 | GO:0003938: IMP dehydrogenase activity | 3.65E-04 |
| 21 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 3.65E-04 |
| 22 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 3.65E-04 |
| 23 | GO:0004150: dihydroneopterin aldolase activity | 3.65E-04 |
| 24 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.89E-04 |
| 25 | GO:0052656: L-isoleucine transaminase activity | 8.53E-04 |
| 26 | GO:0052654: L-leucine transaminase activity | 8.53E-04 |
| 27 | GO:0052655: L-valine transaminase activity | 8.53E-04 |
| 28 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 8.53E-04 |
| 29 | GO:0030570: pectate lyase activity | 8.67E-04 |
| 30 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.13E-03 |
| 31 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.13E-03 |
| 32 | GO:0004737: pyruvate decarboxylase activity | 1.13E-03 |
| 33 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 1.13E-03 |
| 34 | GO:0080032: methyl jasmonate esterase activity | 1.13E-03 |
| 35 | GO:0016846: carbon-sulfur lyase activity | 1.43E-03 |
| 36 | GO:0016829: lyase activity | 1.74E-03 |
| 37 | GO:0008519: ammonium transmembrane transporter activity | 1.76E-03 |
| 38 | GO:0030976: thiamine pyrophosphate binding | 1.76E-03 |
| 39 | GO:0000210: NAD+ diphosphatase activity | 1.76E-03 |
| 40 | GO:0016208: AMP binding | 1.76E-03 |
| 41 | GO:0004709: MAP kinase kinase kinase activity | 1.76E-03 |
| 42 | GO:0003872: 6-phosphofructokinase activity | 2.48E-03 |
| 43 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 2.48E-03 |
| 44 | GO:0008017: microtubule binding | 2.51E-03 |
| 45 | GO:0004805: trehalose-phosphatase activity | 4.64E-03 |
| 46 | GO:0043621: protein self-association | 4.72E-03 |
| 47 | GO:0008794: arsenate reductase (glutaredoxin) activity | 5.12E-03 |
| 48 | GO:0005515: protein binding | 5.44E-03 |
| 49 | GO:0000175: 3'-5'-exoribonuclease activity | 6.14E-03 |
| 50 | GO:0031072: heat shock protein binding | 6.14E-03 |
| 51 | GO:0005262: calcium channel activity | 6.14E-03 |
| 52 | GO:0008131: primary amine oxidase activity | 6.67E-03 |
| 53 | GO:0004871: signal transducer activity | 7.21E-03 |
| 54 | GO:0004970: ionotropic glutamate receptor activity | 7.22E-03 |
| 55 | GO:0005217: intracellular ligand-gated ion channel activity | 7.22E-03 |
| 56 | GO:0005528: FK506 binding | 8.38E-03 |
| 57 | GO:0003714: transcription corepressor activity | 8.38E-03 |
| 58 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 9.59E-03 |
| 59 | GO:0008408: 3'-5' exonuclease activity | 9.59E-03 |
| 60 | GO:0003727: single-stranded RNA binding | 1.15E-02 |
| 61 | GO:0001085: RNA polymerase II transcription factor binding | 1.36E-02 |
| 62 | GO:0008536: Ran GTPase binding | 1.36E-02 |
| 63 | GO:0005351: sugar:proton symporter activity | 1.42E-02 |
| 64 | GO:0010181: FMN binding | 1.43E-02 |
| 65 | GO:0005355: glucose transmembrane transporter activity | 1.43E-02 |
| 66 | GO:0000156: phosphorelay response regulator activity | 1.73E-02 |
| 67 | GO:0004721: phosphoprotein phosphatase activity | 2.30E-02 |
| 68 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.74E-02 |
| 69 | GO:0046872: metal ion binding | 2.93E-02 |
| 70 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.12E-02 |
| 71 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.71E-02 |
| 72 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.91E-02 |
| 73 | GO:0044212: transcription regulatory region DNA binding | 4.42E-02 |
| 74 | GO:0003777: microtubule motor activity | 4.66E-02 |
| 75 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.99E-02 |