Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G12330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000121: regulation of removal of superoxide radicals0.00E+00
2GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
3GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
4GO:2000469: negative regulation of peroxidase activity0.00E+00
5GO:0031426: polycistronic mRNA processing6.74E-05
6GO:0043007: maintenance of rDNA6.74E-05
7GO:0010362: negative regulation of anion channel activity by blue light6.74E-05
8GO:0010541: acropetal auxin transport1.62E-04
9GO:0010155: regulation of proton transport1.62E-04
10GO:0015790: UDP-xylose transport1.62E-04
11GO:0010160: formation of animal organ boundary2.75E-04
12GO:0046621: negative regulation of organ growth2.75E-04
13GO:0048443: stamen development3.02E-04
14GO:0043481: anthocyanin accumulation in tissues in response to UV light3.98E-04
15GO:0010239: chloroplast mRNA processing3.98E-04
16GO:0032366: intracellular sterol transport5.32E-04
17GO:0006021: inositol biosynthetic process5.32E-04
18GO:0048442: sepal development5.32E-04
19GO:0034052: positive regulation of plant-type hypersensitive response6.73E-04
20GO:0009904: chloroplast accumulation movement6.73E-04
21GO:0006465: signal peptide processing6.73E-04
22GO:0046855: inositol phosphate dephosphorylation8.23E-04
23GO:0060918: auxin transport8.23E-04
24GO:0000160: phosphorelay signal transduction system9.07E-04
25GO:0010076: maintenance of floral meristem identity9.79E-04
26GO:0048280: vesicle fusion with Golgi apparatus9.79E-04
27GO:0009903: chloroplast avoidance movement9.79E-04
28GO:0048527: lateral root development9.93E-04
29GO:0009637: response to blue light1.08E-03
30GO:0048437: floral organ development1.14E-03
31GO:0000122: negative regulation of transcription from RNA polymerase II promoter1.14E-03
32GO:0030307: positive regulation of cell growth1.14E-03
33GO:0043068: positive regulation of programmed cell death1.32E-03
34GO:0007155: cell adhesion1.32E-03
35GO:0048507: meristem development1.69E-03
36GO:0051865: protein autoubiquitination1.69E-03
37GO:0048354: mucilage biosynthetic process involved in seed coat development1.89E-03
38GO:0009638: phototropism1.89E-03
39GO:0006896: Golgi to vacuole transport2.10E-03
40GO:0048441: petal development2.10E-03
41GO:0009641: shade avoidance2.10E-03
42GO:0010192: mucilage biosynthetic process2.10E-03
43GO:0016024: CDP-diacylglycerol biosynthetic process2.53E-03
44GO:0008361: regulation of cell size2.53E-03
45GO:0006790: sulfur compound metabolic process2.53E-03
46GO:0009785: blue light signaling pathway2.76E-03
47GO:0030048: actin filament-based movement2.76E-03
48GO:0009718: anthocyanin-containing compound biosynthetic process2.76E-03
49GO:0010143: cutin biosynthetic process2.99E-03
50GO:0048440: carpel development2.99E-03
51GO:0010223: secondary shoot formation2.99E-03
52GO:0009887: animal organ morphogenesis2.99E-03
53GO:0010540: basipetal auxin transport2.99E-03
54GO:0009266: response to temperature stimulus2.99E-03
55GO:0019853: L-ascorbic acid biosynthetic process3.23E-03
56GO:0046854: phosphatidylinositol phosphorylation3.23E-03
57GO:0007017: microtubule-based process3.99E-03
58GO:0015992: proton transport4.26E-03
59GO:0007623: circadian rhythm4.48E-03
60GO:0009814: defense response, incompatible interaction4.53E-03
61GO:0010017: red or far-red light signaling pathway4.53E-03
62GO:0009294: DNA mediated transformation4.81E-03
63GO:0071369: cellular response to ethylene stimulus4.81E-03
64GO:0019722: calcium-mediated signaling5.09E-03
65GO:0042147: retrograde transport, endosome to Golgi5.38E-03
66GO:0015991: ATP hydrolysis coupled proton transport5.68E-03
67GO:0045489: pectin biosynthetic process5.98E-03
68GO:0009958: positive gravitropism5.98E-03
69GO:0009646: response to absence of light6.28E-03
70GO:0006623: protein targeting to vacuole6.60E-03
71GO:0009791: post-embryonic development6.60E-03
72GO:0006891: intra-Golgi vesicle-mediated transport6.91E-03
73GO:0010252: auxin homeostasis7.90E-03
74GO:0009639: response to red or far red light7.90E-03
75GO:0007267: cell-cell signaling8.24E-03
76GO:0015995: chlorophyll biosynthetic process1.00E-02
77GO:0006888: ER to Golgi vesicle-mediated transport1.00E-02
78GO:0016311: dephosphorylation1.04E-02
79GO:0045892: negative regulation of transcription, DNA-templated1.04E-02
80GO:0030244: cellulose biosynthetic process1.08E-02
81GO:0018298: protein-chromophore linkage1.08E-02
82GO:0006811: ion transport1.15E-02
83GO:0010218: response to far red light1.15E-02
84GO:0010119: regulation of stomatal movement1.19E-02
85GO:0007568: aging1.19E-02
86GO:0006629: lipid metabolic process1.27E-02
87GO:0016051: carbohydrate biosynthetic process1.27E-02
88GO:0009640: photomorphogenesis1.52E-02
89GO:0009926: auxin polar transport1.52E-02
90GO:0008643: carbohydrate transport1.61E-02
91GO:0000165: MAPK cascade1.74E-02
92GO:0009664: plant-type cell wall organization1.79E-02
93GO:0006857: oligopeptide transport1.97E-02
94GO:0009626: plant-type hypersensitive response2.22E-02
95GO:0009555: pollen development2.26E-02
96GO:0009416: response to light stimulus2.26E-02
97GO:0009742: brassinosteroid mediated signaling pathway2.52E-02
98GO:0045893: positive regulation of transcription, DNA-templated2.59E-02
99GO:0042744: hydrogen peroxide catabolic process3.11E-02
100GO:0010150: leaf senescence3.57E-02
101GO:0045490: pectin catabolic process3.57E-02
102GO:0010228: vegetative to reproductive phase transition of meristem3.68E-02
103GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.86E-02
104GO:0009739: response to gibberellin3.86E-02
105GO:0007166: cell surface receptor signaling pathway3.92E-02
106GO:0009617: response to bacterium4.04E-02
107GO:0010468: regulation of gene expression4.04E-02
108GO:0071555: cell wall organization4.55E-02
109GO:0045944: positive regulation of transcription from RNA polymerase II promoter4.61E-02
110GO:0009826: unidimensional cell growth4.73E-02
RankGO TermAdjusted P value
1GO:0010347: L-galactose-1-phosphate phosphatase activity6.74E-05
2GO:0047259: glucomannan 4-beta-mannosyltransferase activity6.74E-05
3GO:0008934: inositol monophosphate 1-phosphatase activity1.62E-04
4GO:0052833: inositol monophosphate 4-phosphatase activity1.62E-04
5GO:0005464: UDP-xylose transmembrane transporter activity1.62E-04
6GO:0052832: inositol monophosphate 3-phosphatase activity1.62E-04
7GO:0048027: mRNA 5'-UTR binding3.98E-04
8GO:0009882: blue light photoreceptor activity3.98E-04
9GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances5.32E-04
10GO:0000293: ferric-chelate reductase activity8.23E-04
11GO:0004366: glycerol-3-phosphate O-acyltransferase activity8.23E-04
12GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity8.23E-04
13GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity9.79E-04
14GO:0051753: mannan synthase activity9.79E-04
15GO:0103095: wax ester synthase activity1.50E-03
16GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity1.50E-03
17GO:0000976: transcription regulatory region sequence-specific DNA binding2.53E-03
18GO:0016746: transferase activity, transferring acyl groups2.69E-03
19GO:0010329: auxin efflux transmembrane transporter activity2.76E-03
20GO:0008081: phosphoric diester hydrolase activity2.76E-03
21GO:0000155: phosphorelay sensor kinase activity2.76E-03
22GO:0003774: motor activity2.99E-03
23GO:0031624: ubiquitin conjugating enzyme binding2.99E-03
24GO:0008146: sulfotransferase activity3.23E-03
25GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.53E-03
26GO:0030570: pectate lyase activity4.81E-03
27GO:0046933: proton-transporting ATP synthase activity, rotational mechanism5.98E-03
28GO:0010181: FMN binding6.28E-03
29GO:0000156: phosphorelay response regulator activity7.57E-03
30GO:0016791: phosphatase activity7.90E-03
31GO:0003993: acid phosphatase activity1.31E-02
32GO:0016757: transferase activity, transferring glycosyl groups1.33E-02
33GO:0000149: SNARE binding1.35E-02
34GO:0005484: SNAP receptor activity1.52E-02
35GO:0016298: lipase activity1.93E-02
36GO:0003777: microtubule motor activity2.02E-02
37GO:0022857: transmembrane transporter activity2.31E-02
38GO:0016829: lyase activity3.00E-02
39GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.11E-02
40GO:0008565: protein transporter activity3.22E-02
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.39E-02
42GO:0015297: antiporter activity3.45E-02
43GO:0008017: microtubule binding3.68E-02
44GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.23E-02
45GO:0042802: identical protein binding4.23E-02
46GO:0004601: peroxidase activity4.86E-02
47GO:0016788: hydrolase activity, acting on ester bonds4.93E-02
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Gene type



Gene DE type