Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G11850

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:1902289: negative regulation of defense response to oomycetes0.00E+00
6GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
7GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
8GO:0010273: detoxification of copper ion0.00E+00
9GO:1900367: positive regulation of defense response to insect0.00E+00
10GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
11GO:0002764: immune response-regulating signaling pathway0.00E+00
12GO:1902009: positive regulation of toxin transport0.00E+00
13GO:0010324: membrane invagination0.00E+00
14GO:0032499: detection of peptidoglycan0.00E+00
15GO:0006182: cGMP biosynthetic process0.00E+00
16GO:0010200: response to chitin2.41E-07
17GO:0009617: response to bacterium3.51E-06
18GO:0007166: cell surface receptor signaling pathway2.88E-05
19GO:0006468: protein phosphorylation8.73E-05
20GO:0080142: regulation of salicylic acid biosynthetic process1.12E-04
21GO:0010150: leaf senescence1.44E-04
22GO:0048508: embryonic meristem development4.40E-04
23GO:0042350: GDP-L-fucose biosynthetic process4.40E-04
24GO:0019567: arabinose biosynthetic process4.40E-04
25GO:0015969: guanosine tetraphosphate metabolic process4.40E-04
26GO:0080173: male-female gamete recognition during double fertilization4.40E-04
27GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.40E-04
28GO:0009609: response to symbiotic bacterium4.40E-04
29GO:0033306: phytol metabolic process4.40E-04
30GO:1901430: positive regulation of syringal lignin biosynthetic process4.40E-04
31GO:0010482: regulation of epidermal cell division4.40E-04
32GO:1901183: positive regulation of camalexin biosynthetic process4.40E-04
33GO:0032491: detection of molecule of fungal origin4.40E-04
34GO:0010045: response to nickel cation4.40E-04
35GO:0042742: defense response to bacterium6.40E-04
36GO:0010112: regulation of systemic acquired resistance7.77E-04
37GO:0006952: defense response8.95E-04
38GO:1900426: positive regulation of defense response to bacterium9.15E-04
39GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.15E-04
40GO:0015914: phospholipid transport9.50E-04
41GO:0010155: regulation of proton transport9.50E-04
42GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.50E-04
43GO:0009838: abscission9.50E-04
44GO:0080185: effector dependent induction by symbiont of host immune response9.50E-04
45GO:0010618: aerenchyma formation9.50E-04
46GO:0080181: lateral root branching9.50E-04
47GO:0006024: glycosaminoglycan biosynthetic process9.50E-04
48GO:0055088: lipid homeostasis9.50E-04
49GO:0019521: D-gluconate metabolic process9.50E-04
50GO:0010115: regulation of abscisic acid biosynthetic process9.50E-04
51GO:0000719: photoreactive repair9.50E-04
52GO:0015908: fatty acid transport9.50E-04
53GO:0010042: response to manganese ion9.50E-04
54GO:0044419: interspecies interaction between organisms9.50E-04
55GO:0010271: regulation of chlorophyll catabolic process9.50E-04
56GO:0031349: positive regulation of defense response9.50E-04
57GO:0009945: radial axis specification9.50E-04
58GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.50E-04
59GO:0051258: protein polymerization9.50E-04
60GO:0060919: auxin influx9.50E-04
61GO:0015012: heparan sulfate proteoglycan biosynthetic process9.50E-04
62GO:0071668: plant-type cell wall assembly9.50E-04
63GO:0002221: pattern recognition receptor signaling pathway9.50E-04
64GO:0006032: chitin catabolic process1.06E-03
65GO:0009751: response to salicylic acid1.25E-03
66GO:0009626: plant-type hypersensitive response1.25E-03
67GO:0001666: response to hypoxia1.27E-03
68GO:0009620: response to fungus1.31E-03
69GO:0009816: defense response to bacterium, incompatible interaction1.36E-03
70GO:0015695: organic cation transport1.55E-03
71GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.55E-03
72GO:0016045: detection of bacterium1.55E-03
73GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.55E-03
74GO:1900140: regulation of seedling development1.55E-03
75GO:0010359: regulation of anion channel activity1.55E-03
76GO:0002230: positive regulation of defense response to virus by host1.55E-03
77GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.55E-03
78GO:0044375: regulation of peroxisome size1.55E-03
79GO:0009407: toxin catabolic process2.01E-03
80GO:0046688: response to copper ion2.02E-03
81GO:0007568: aging2.14E-03
82GO:0034219: carbohydrate transmembrane transport2.24E-03
83GO:0043207: response to external biotic stimulus2.24E-03
84GO:0072334: UDP-galactose transmembrane transport2.24E-03
85GO:0030100: regulation of endocytosis2.24E-03
86GO:0009226: nucleotide-sugar biosynthetic process2.24E-03
87GO:0072583: clathrin-dependent endocytosis2.24E-03
88GO:0015696: ammonium transport2.24E-03
89GO:0071323: cellular response to chitin2.24E-03
90GO:1902290: positive regulation of defense response to oomycetes2.24E-03
91GO:0006825: copper ion transport2.75E-03
92GO:0006897: endocytosis3.00E-03
93GO:0060548: negative regulation of cell death3.01E-03
94GO:0045227: capsule polysaccharide biosynthetic process3.01E-03
95GO:0010483: pollen tube reception3.01E-03
96GO:0006085: acetyl-CoA biosynthetic process3.01E-03
97GO:0072488: ammonium transmembrane transport3.01E-03
98GO:0033358: UDP-L-arabinose biosynthetic process3.01E-03
99GO:0071219: cellular response to molecule of bacterial origin3.01E-03
100GO:0051567: histone H3-K9 methylation3.01E-03
101GO:0010188: response to microbial phytotoxin3.01E-03
102GO:0016998: cell wall macromolecule catabolic process3.03E-03
103GO:2000022: regulation of jasmonic acid mediated signaling pathway3.31E-03
104GO:0031348: negative regulation of defense response3.31E-03
105GO:0071456: cellular response to hypoxia3.31E-03
106GO:0006012: galactose metabolic process3.61E-03
107GO:0010225: response to UV-C3.85E-03
108GO:0034052: positive regulation of plant-type hypersensitive response3.85E-03
109GO:0097428: protein maturation by iron-sulfur cluster transfer3.85E-03
110GO:0009636: response to toxic substance3.86E-03
111GO:0006470: protein dephosphorylation4.27E-03
112GO:0010315: auxin efflux4.77E-03
113GO:1900425: negative regulation of defense response to bacterium4.77E-03
114GO:0006014: D-ribose metabolic process4.77E-03
115GO:0009759: indole glucosinolate biosynthetic process4.77E-03
116GO:0010942: positive regulation of cell death4.77E-03
117GO:0006979: response to oxidative stress5.72E-03
118GO:0009749: response to glucose5.73E-03
119GO:0010310: regulation of hydrogen peroxide metabolic process5.75E-03
120GO:2000067: regulation of root morphogenesis5.75E-03
121GO:0009942: longitudinal axis specification5.75E-03
122GO:0031930: mitochondria-nucleus signaling pathway5.75E-03
123GO:0010555: response to mannitol5.75E-03
124GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.80E-03
125GO:0009610: response to symbiotic fungus6.80E-03
126GO:0043090: amino acid import6.80E-03
127GO:1900056: negative regulation of leaf senescence6.80E-03
128GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway6.80E-03
129GO:0015937: coenzyme A biosynthetic process6.80E-03
130GO:1900057: positive regulation of leaf senescence6.80E-03
131GO:0050829: defense response to Gram-negative bacterium6.80E-03
132GO:0010038: response to metal ion6.80E-03
133GO:0016559: peroxisome fission7.91E-03
134GO:0009787: regulation of abscisic acid-activated signaling pathway7.91E-03
135GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.91E-03
136GO:0009819: drought recovery7.91E-03
137GO:0030162: regulation of proteolysis7.91E-03
138GO:0006605: protein targeting7.91E-03
139GO:1900150: regulation of defense response to fungus7.91E-03
140GO:0006904: vesicle docking involved in exocytosis7.92E-03
141GO:2000031: regulation of salicylic acid mediated signaling pathway9.09E-03
142GO:0010208: pollen wall assembly9.09E-03
143GO:0007186: G-protein coupled receptor signaling pathway9.09E-03
144GO:0010120: camalexin biosynthetic process9.09E-03
145GO:0010204: defense response signaling pathway, resistance gene-independent9.09E-03
146GO:0015031: protein transport9.41E-03
147GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.90E-03
148GO:0009627: systemic acquired resistance9.96E-03
149GO:0016192: vesicle-mediated transport1.01E-02
150GO:0006098: pentose-phosphate shunt1.03E-02
151GO:0009821: alkaloid biosynthetic process1.03E-02
152GO:0019432: triglyceride biosynthetic process1.03E-02
153GO:0009737: response to abscisic acid1.14E-02
154GO:0010380: regulation of chlorophyll biosynthetic process1.16E-02
155GO:0008202: steroid metabolic process1.16E-02
156GO:0009817: defense response to fungus, incompatible interaction1.17E-02
157GO:0008219: cell death1.17E-02
158GO:0006886: intracellular protein transport1.30E-02
159GO:0019684: photosynthesis, light reaction1.44E-02
160GO:0009750: response to fructose1.44E-02
161GO:0048765: root hair cell differentiation1.44E-02
162GO:0030148: sphingolipid biosynthetic process1.44E-02
163GO:0002213: defense response to insect1.58E-02
164GO:0010105: negative regulation of ethylene-activated signaling pathway1.58E-02
165GO:0045037: protein import into chloroplast stroma1.58E-02
166GO:0055046: microgametogenesis1.73E-02
167GO:2000012: regulation of auxin polar transport1.73E-02
168GO:0010540: basipetal auxin transport1.89E-02
169GO:0034605: cellular response to heat1.89E-02
170GO:0002237: response to molecule of bacterial origin1.89E-02
171GO:0007034: vacuolar transport1.89E-02
172GO:0051707: response to other organism1.91E-02
173GO:0010053: root epidermal cell differentiation2.05E-02
174GO:0009225: nucleotide-sugar metabolic process2.05E-02
175GO:0007031: peroxisome organization2.05E-02
176GO:0010167: response to nitrate2.05E-02
177GO:0070588: calcium ion transmembrane transport2.05E-02
178GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.32E-02
179GO:0009863: salicylic acid mediated signaling pathway2.38E-02
180GO:0080147: root hair cell development2.38E-02
181GO:0030150: protein import into mitochondrial matrix2.38E-02
182GO:2000377: regulation of reactive oxygen species metabolic process2.38E-02
183GO:0050832: defense response to fungus2.42E-02
184GO:0051302: regulation of cell division2.55E-02
185GO:0010026: trichome differentiation2.55E-02
186GO:0009809: lignin biosynthetic process2.58E-02
187GO:0006486: protein glycosylation2.58E-02
188GO:0007165: signal transduction2.65E-02
189GO:0010431: seed maturation2.73E-02
190GO:0030245: cellulose catabolic process2.91E-02
191GO:0035428: hexose transmembrane transport2.91E-02
192GO:0006096: glycolytic process3.05E-02
193GO:0009411: response to UV3.10E-02
194GO:0009625: response to insect3.10E-02
195GO:0010089: xylem development3.29E-02
196GO:0010584: pollen exine formation3.29E-02
197GO:0006284: base-excision repair3.29E-02
198GO:0009306: protein secretion3.29E-02
199GO:0070417: cellular response to cold3.48E-02
200GO:0000413: protein peptidyl-prolyl isomerization3.68E-02
201GO:0071472: cellular response to salt stress3.88E-02
202GO:0006662: glycerol ether metabolic process3.88E-02
203GO:0046323: glucose import3.88E-02
204GO:0009742: brassinosteroid mediated signaling pathway3.89E-02
205GO:0009414: response to water deprivation4.08E-02
206GO:0035556: intracellular signal transduction4.26E-02
207GO:0019252: starch biosynthetic process4.30E-02
208GO:0008654: phospholipid biosynthetic process4.30E-02
209GO:0071554: cell wall organization or biogenesis4.51E-02
210GO:0002229: defense response to oomycetes4.51E-02
211GO:0009630: gravitropism4.73E-02
212GO:0030163: protein catabolic process4.94E-02
RankGO TermAdjusted P value
1GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
4GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
5GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
6GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
7GO:2001080: chitosan binding0.00E+00
8GO:0008320: protein transmembrane transporter activity1.37E-05
9GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.53E-05
10GO:0004714: transmembrane receptor protein tyrosine kinase activity2.04E-05
11GO:0004672: protein kinase activity5.28E-05
12GO:0019199: transmembrane receptor protein kinase activity1.12E-04
13GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.73E-04
14GO:0016301: kinase activity2.93E-04
15GO:0003978: UDP-glucose 4-epimerase activity3.30E-04
16GO:0050577: GDP-L-fucose synthase activity4.40E-04
17GO:0032050: clathrin heavy chain binding4.40E-04
18GO:2001227: quercitrin binding4.40E-04
19GO:1901149: salicylic acid binding4.40E-04
20GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity4.40E-04
21GO:2001147: camalexin binding4.40E-04
22GO:0015245: fatty acid transporter activity4.40E-04
23GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.40E-04
24GO:0004674: protein serine/threonine kinase activity5.91E-04
25GO:0004743: pyruvate kinase activity9.15E-04
26GO:0030955: potassium ion binding9.15E-04
27GO:0004871: signal transducer activity9.32E-04
28GO:0004594: pantothenate kinase activity9.50E-04
29GO:0001671: ATPase activator activity9.50E-04
30GO:0045140: inositol phosphoceramide synthase activity9.50E-04
31GO:0015036: disulfide oxidoreductase activity9.50E-04
32GO:0008728: GTP diphosphokinase activity9.50E-04
33GO:0004568: chitinase activity1.06E-03
34GO:0004713: protein tyrosine kinase activity1.06E-03
35GO:0008375: acetylglucosaminyltransferase activity1.46E-03
36GO:0001664: G-protein coupled receptor binding1.55E-03
37GO:0016531: copper chaperone activity1.55E-03
38GO:0031683: G-protein beta/gamma-subunit complex binding1.55E-03
39GO:0004383: guanylate cyclase activity1.55E-03
40GO:0004806: triglyceride lipase activity1.56E-03
41GO:0005388: calcium-transporting ATPase activity1.59E-03
42GO:0005524: ATP binding1.99E-03
43GO:0010328: auxin influx transmembrane transporter activity3.01E-03
44GO:0050373: UDP-arabinose 4-epimerase activity3.01E-03
45GO:0033612: receptor serine/threonine kinase binding3.03E-03
46GO:0004364: glutathione transferase activity3.16E-03
47GO:0008725: DNA-3-methyladenine glycosylase activity3.85E-03
48GO:0005459: UDP-galactose transmembrane transporter activity3.85E-03
49GO:0005496: steroid binding3.85E-03
50GO:0004605: phosphatidate cytidylyltransferase activity4.77E-03
51GO:0008519: ammonium transmembrane transporter activity4.77E-03
52GO:0050662: coenzyme binding5.34E-03
53GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.75E-03
54GO:0004747: ribokinase activity5.75E-03
55GO:0004144: diacylglycerol O-acyltransferase activity5.75E-03
56GO:0004656: procollagen-proline 4-dioxygenase activity5.75E-03
57GO:0004143: diacylglycerol kinase activity6.80E-03
58GO:0043295: glutathione binding6.80E-03
59GO:0008865: fructokinase activity7.91E-03
60GO:0008142: oxysterol binding9.09E-03
61GO:0003951: NAD+ kinase activity9.09E-03
62GO:0071949: FAD binding1.03E-02
63GO:0016844: strictosidine synthase activity1.16E-02
64GO:0008171: O-methyltransferase activity1.30E-02
65GO:0004722: protein serine/threonine phosphatase activity1.42E-02
66GO:0008794: arsenate reductase (glutaredoxin) activity1.44E-02
67GO:0008559: xenobiotic-transporting ATPase activity1.44E-02
68GO:0015198: oligopeptide transporter activity1.58E-02
69GO:0004712: protein serine/threonine/tyrosine kinase activity1.62E-02
70GO:0010329: auxin efflux transmembrane transporter activity1.73E-02
71GO:0004022: alcohol dehydrogenase (NAD) activity1.73E-02
72GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.73E-02
73GO:0008061: chitin binding2.05E-02
74GO:0051119: sugar transmembrane transporter activity2.05E-02
75GO:0004190: aspartic-type endopeptidase activity2.05E-02
76GO:0005198: structural molecule activity2.15E-02
77GO:0051536: iron-sulfur cluster binding2.38E-02
78GO:0031418: L-ascorbic acid binding2.38E-02
79GO:0003954: NADH dehydrogenase activity2.38E-02
80GO:0051087: chaperone binding2.55E-02
81GO:0019706: protein-cysteine S-palmitoyltransferase activity2.73E-02
82GO:0031625: ubiquitin protein ligase binding2.86E-02
83GO:0004842: ubiquitin-protein transferase activity2.92E-02
84GO:0043531: ADP binding2.99E-02
85GO:0008810: cellulase activity3.10E-02
86GO:0047134: protein-disulfide reductase activity3.48E-02
87GO:0015035: protein disulfide oxidoreductase activity3.78E-02
88GO:0004791: thioredoxin-disulfide reductase activity4.09E-02
89GO:0016853: isomerase activity4.09E-02
90GO:0005355: glucose transmembrane transporter activity4.09E-02
91GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.94E-02
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Gene type



Gene DE type