Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G11350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071327: cellular response to trehalose stimulus0.00E+00
2GO:1900367: positive regulation of defense response to insect0.00E+00
3GO:0010225: response to UV-C9.33E-06
4GO:0019478: D-amino acid catabolic process7.58E-05
5GO:0006562: proline catabolic process7.58E-05
6GO:0007229: integrin-mediated signaling pathway7.58E-05
7GO:1901183: positive regulation of camalexin biosynthetic process7.58E-05
8GO:0051938: L-glutamate import7.58E-05
9GO:0010421: hydrogen peroxide-mediated programmed cell death7.58E-05
10GO:0007034: vacuolar transport1.55E-04
11GO:0009266: response to temperature stimulus1.55E-04
12GO:0015865: purine nucleotide transport1.81E-04
13GO:0019725: cellular homeostasis1.81E-04
14GO:0043091: L-arginine import1.81E-04
15GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.81E-04
16GO:0010133: proline catabolic process to glutamate1.81E-04
17GO:0015802: basic amino acid transport1.81E-04
18GO:0010618: aerenchyma formation1.81E-04
19GO:0010200: response to chitin2.15E-04
20GO:0031348: negative regulation of defense response2.96E-04
21GO:0009062: fatty acid catabolic process3.05E-04
22GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process3.05E-04
23GO:0009625: response to insect3.24E-04
24GO:0009751: response to salicylic acid3.73E-04
25GO:0006537: glutamate biosynthetic process4.41E-04
26GO:0051289: protein homotetramerization4.41E-04
27GO:0046902: regulation of mitochondrial membrane permeability4.41E-04
28GO:0080142: regulation of salicylic acid biosynthetic process5.87E-04
29GO:0009652: thigmotropism5.87E-04
30GO:1902584: positive regulation of response to water deprivation5.87E-04
31GO:0006621: protein retention in ER lumen5.87E-04
32GO:0045927: positive regulation of growth7.44E-04
33GO:0034052: positive regulation of plant-type hypersensitive response7.44E-04
34GO:0001666: response to hypoxia7.77E-04
35GO:0047484: regulation of response to osmotic stress9.07E-04
36GO:0009759: indole glucosinolate biosynthetic process9.07E-04
37GO:0010942: positive regulation of cell death9.07E-04
38GO:0034389: lipid particle organization1.08E-03
39GO:0009094: L-phenylalanine biosynthetic process1.08E-03
40GO:0042372: phylloquinone biosynthetic process1.08E-03
41GO:0045926: negative regulation of growth1.08E-03
42GO:0009612: response to mechanical stimulus1.08E-03
43GO:0010310: regulation of hydrogen peroxide metabolic process1.08E-03
44GO:0009651: response to salt stress1.21E-03
45GO:0080186: developmental vegetative growth1.26E-03
46GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.46E-03
47GO:0051707: response to other organism1.60E-03
48GO:0046777: protein autophosphorylation1.61E-03
49GO:2000031: regulation of salicylic acid mediated signaling pathway1.66E-03
50GO:0010099: regulation of photomorphogenesis1.66E-03
51GO:0048193: Golgi vesicle transport1.66E-03
52GO:0009835: fruit ripening1.87E-03
53GO:1900426: positive regulation of defense response to bacterium2.09E-03
54GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway2.09E-03
55GO:0007064: mitotic sister chromatid cohesion2.32E-03
56GO:0009682: induced systemic resistance2.56E-03
57GO:0052544: defense response by callose deposition in cell wall2.56E-03
58GO:0009626: plant-type hypersensitive response2.69E-03
59GO:0010105: negative regulation of ethylene-activated signaling pathway2.80E-03
60GO:0008361: regulation of cell size2.80E-03
61GO:0012501: programmed cell death2.80E-03
62GO:0002213: defense response to insect2.80E-03
63GO:0055046: microgametogenesis3.06E-03
64GO:0046854: phosphatidylinositol phosphorylation3.59E-03
65GO:0009969: xyloglucan biosynthetic process3.59E-03
66GO:0080147: root hair cell development4.15E-03
67GO:0005992: trehalose biosynthetic process4.15E-03
68GO:0009116: nucleoside metabolic process4.15E-03
69GO:0003333: amino acid transmembrane transport4.73E-03
70GO:0019915: lipid storage4.73E-03
71GO:0009269: response to desiccation4.73E-03
72GO:0009738: abscisic acid-activated signaling pathway4.80E-03
73GO:0016226: iron-sulfur cluster assembly5.03E-03
74GO:2000022: regulation of jasmonic acid mediated signaling pathway5.03E-03
75GO:0009611: response to wounding5.14E-03
76GO:0010150: leaf senescence5.21E-03
77GO:0009693: ethylene biosynthetic process5.34E-03
78GO:0035556: intracellular signal transduction5.36E-03
79GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process5.83E-03
80GO:0009789: positive regulation of abscisic acid-activated signaling pathway5.98E-03
81GO:0009617: response to bacterium6.22E-03
82GO:0010468: regulation of gene expression6.22E-03
83GO:0009646: response to absence of light6.99E-03
84GO:0010193: response to ozone7.69E-03
85GO:0006635: fatty acid beta-oxidation7.69E-03
86GO:0016032: viral process8.05E-03
87GO:0030163: protein catabolic process8.42E-03
88GO:0019760: glucosinolate metabolic process8.79E-03
89GO:0009911: positive regulation of flower development9.95E-03
90GO:0080167: response to karrikin1.00E-02
91GO:0009816: defense response to bacterium, incompatible interaction1.03E-02
92GO:0016192: vesicle-mediated transport1.05E-02
93GO:0009627: systemic acquired resistance1.07E-02
94GO:0048573: photoperiodism, flowering1.12E-02
95GO:0045892: negative regulation of transcription, DNA-templated1.22E-02
96GO:0009832: plant-type cell wall biogenesis1.24E-02
97GO:0009813: flavonoid biosynthetic process1.24E-02
98GO:0010043: response to zinc ion1.33E-02
99GO:0006629: lipid metabolic process1.48E-02
100GO:0009753: response to jasmonic acid1.59E-02
101GO:0042542: response to hydrogen peroxide1.65E-02
102GO:0009744: response to sucrose1.70E-02
103GO:0000209: protein polyubiquitination1.75E-02
104GO:0009636: response to toxic substance1.84E-02
105GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.94E-02
106GO:0009846: pollen germination1.99E-02
107GO:0042538: hyperosmotic salinity response1.99E-02
108GO:0006486: protein glycosylation2.10E-02
109GO:0009909: regulation of flower development2.25E-02
110GO:0009620: response to fungus2.53E-02
111GO:0018105: peptidyl-serine phosphorylation2.75E-02
112GO:0009737: response to abscisic acid3.17E-02
113GO:0055085: transmembrane transport3.34E-02
114GO:0009793: embryo development ending in seed dormancy3.51E-02
115GO:0010228: vegetative to reproductive phase transition of meristem4.11E-02
116GO:0009739: response to gibberellin4.31E-02
117GO:0007166: cell surface receptor signaling pathway4.37E-02
RankGO TermAdjusted P value
1GO:0005046: KDEL sequence binding0.00E+00
2GO:0051499: D-aminoacyl-tRNA deacylase activity0.00E+00
3GO:0004657: proline dehydrogenase activity7.58E-05
4GO:0031127: alpha-(1,2)-fucosyltransferase activity7.58E-05
5GO:0010179: IAA-Ala conjugate hydrolase activity7.58E-05
6GO:0008809: carnitine racemase activity7.58E-05
7GO:0043424: protein histidine kinase binding2.44E-04
8GO:0005515: protein binding2.74E-04
9GO:0016656: monodehydroascorbate reductase (NADH) activity4.41E-04
10GO:0004165: dodecenoyl-CoA delta-isomerase activity4.41E-04
11GO:0015189: L-lysine transmembrane transporter activity4.41E-04
12GO:0015181: arginine transmembrane transporter activity4.41E-04
13GO:0047769: arogenate dehydratase activity5.87E-04
14GO:0004664: prephenate dehydratase activity5.87E-04
15GO:0046923: ER retention sequence binding5.87E-04
16GO:0005313: L-glutamate transmembrane transporter activity5.87E-04
17GO:0005471: ATP:ADP antiporter activity7.44E-04
18GO:0045431: flavonol synthase activity7.44E-04
19GO:0004806: triglyceride lipase activity9.08E-04
20GO:0004656: procollagen-proline 4-dioxygenase activity1.08E-03
21GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity1.26E-03
22GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity1.46E-03
23GO:0004430: 1-phosphatidylinositol 4-kinase activity1.66E-03
24GO:0008417: fucosyltransferase activity1.87E-03
25GO:0047617: acyl-CoA hydrolase activity2.09E-03
26GO:0015174: basic amino acid transmembrane transporter activity2.09E-03
27GO:0004805: trehalose-phosphatase activity2.32E-03
28GO:0005509: calcium ion binding2.34E-03
29GO:0005543: phospholipid binding2.56E-03
30GO:0044212: transcription regulatory region DNA binding2.64E-03
31GO:0016301: kinase activity3.73E-03
32GO:0004707: MAP kinase activity4.73E-03
33GO:0004872: receptor activity7.34E-03
34GO:0004197: cysteine-type endopeptidase activity8.05E-03
35GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.17E-03
36GO:0008237: metallopeptidase activity9.17E-03
37GO:0043565: sequence-specific DNA binding9.52E-03
38GO:0016597: amino acid binding9.56E-03
39GO:0061630: ubiquitin protein ligase activity1.05E-02
40GO:0009931: calcium-dependent protein serine/threonine kinase activity1.07E-02
41GO:0004683: calmodulin-dependent protein kinase activity1.12E-02
42GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.42E-02
43GO:0003746: translation elongation factor activity1.42E-02
44GO:0003924: GTPase activity1.48E-02
45GO:0004712: protein serine/threonine/tyrosine kinase activity1.51E-02
46GO:0051537: 2 iron, 2 sulfur cluster binding1.79E-02
47GO:0004842: ubiquitin-protein transferase activity1.85E-02
48GO:0016298: lipase activity2.15E-02
49GO:0008234: cysteine-type peptidase activity2.25E-02
50GO:0015171: amino acid transmembrane transporter activity2.25E-02
51GO:0004674: protein serine/threonine kinase activity2.91E-02
52GO:0030170: pyridoxal phosphate binding3.41E-02
53GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.78E-02
54GO:0005516: calmodulin binding3.95E-02
55GO:0005525: GTP binding4.31E-02
56GO:0042802: identical protein binding4.71E-02
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Gene type



Gene DE type





AT1G29330