GO Enrichment Analysis of Co-expressed Genes with
AT4G10890
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 2 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 3 | GO:0046719: regulation by virus of viral protein levels in host cell | 0.00E+00 |
| 4 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 5 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 6 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
| 7 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 8 | GO:0070455: positive regulation of heme biosynthetic process | 0.00E+00 |
| 9 | GO:0009606: tropism | 0.00E+00 |
| 10 | GO:0046620: regulation of organ growth | 5.04E-06 |
| 11 | GO:2000038: regulation of stomatal complex development | 4.33E-05 |
| 12 | GO:0009734: auxin-activated signaling pathway | 9.47E-05 |
| 13 | GO:0009926: auxin polar transport | 1.44E-04 |
| 14 | GO:0009416: response to light stimulus | 1.74E-04 |
| 15 | GO:0034757: negative regulation of iron ion transport | 2.51E-04 |
| 16 | GO:0010480: microsporocyte differentiation | 2.51E-04 |
| 17 | GO:0033206: meiotic cytokinesis | 2.51E-04 |
| 18 | GO:0000066: mitochondrial ornithine transport | 2.51E-04 |
| 19 | GO:0009733: response to auxin | 3.27E-04 |
| 20 | GO:0010252: auxin homeostasis | 3.57E-04 |
| 21 | GO:0006949: syncytium formation | 4.80E-04 |
| 22 | GO:2000123: positive regulation of stomatal complex development | 5.53E-04 |
| 23 | GO:0010569: regulation of double-strand break repair via homologous recombination | 5.53E-04 |
| 24 | GO:0070981: L-asparagine biosynthetic process | 5.53E-04 |
| 25 | GO:0010271: regulation of chlorophyll catabolic process | 5.53E-04 |
| 26 | GO:0071497: cellular response to freezing | 5.53E-04 |
| 27 | GO:1900033: negative regulation of trichome patterning | 5.53E-04 |
| 28 | GO:0018022: peptidyl-lysine methylation | 5.53E-04 |
| 29 | GO:0006529: asparagine biosynthetic process | 5.53E-04 |
| 30 | GO:0009767: photosynthetic electron transport chain | 7.18E-04 |
| 31 | GO:0071705: nitrogen compound transport | 8.99E-04 |
| 32 | GO:0080117: secondary growth | 8.99E-04 |
| 33 | GO:0006760: folic acid-containing compound metabolic process | 8.99E-04 |
| 34 | GO:0009739: response to gibberellin | 1.16E-03 |
| 35 | GO:0007231: osmosensory signaling pathway | 1.28E-03 |
| 36 | GO:0009800: cinnamic acid biosynthetic process | 1.28E-03 |
| 37 | GO:0033014: tetrapyrrole biosynthetic process | 1.28E-03 |
| 38 | GO:0046739: transport of virus in multicellular host | 1.28E-03 |
| 39 | GO:1901332: negative regulation of lateral root development | 1.28E-03 |
| 40 | GO:0071249: cellular response to nitrate | 1.71E-03 |
| 41 | GO:0033500: carbohydrate homeostasis | 1.71E-03 |
| 42 | GO:0046656: folic acid biosynthetic process | 1.71E-03 |
| 43 | GO:1901141: regulation of lignin biosynthetic process | 1.71E-03 |
| 44 | GO:0048629: trichome patterning | 1.71E-03 |
| 45 | GO:1902183: regulation of shoot apical meristem development | 2.19E-03 |
| 46 | GO:0016123: xanthophyll biosynthetic process | 2.19E-03 |
| 47 | GO:0010438: cellular response to sulfur starvation | 2.19E-03 |
| 48 | GO:0032876: negative regulation of DNA endoreduplication | 2.19E-03 |
| 49 | GO:0030308: negative regulation of cell growth | 2.19E-03 |
| 50 | GO:0010375: stomatal complex patterning | 2.19E-03 |
| 51 | GO:0042176: regulation of protein catabolic process | 2.70E-03 |
| 52 | GO:0010315: auxin efflux | 2.70E-03 |
| 53 | GO:0006559: L-phenylalanine catabolic process | 2.70E-03 |
| 54 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.70E-03 |
| 55 | GO:0042793: transcription from plastid promoter | 2.70E-03 |
| 56 | GO:0048831: regulation of shoot system development | 2.70E-03 |
| 57 | GO:0010405: arabinogalactan protein metabolic process | 2.70E-03 |
| 58 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.77E-03 |
| 59 | GO:2000037: regulation of stomatal complex patterning | 3.24E-03 |
| 60 | GO:2000033: regulation of seed dormancy process | 3.24E-03 |
| 61 | GO:0048509: regulation of meristem development | 3.24E-03 |
| 62 | GO:0046654: tetrahydrofolate biosynthetic process | 3.24E-03 |
| 63 | GO:0030488: tRNA methylation | 3.24E-03 |
| 64 | GO:0009828: plant-type cell wall loosening | 3.24E-03 |
| 65 | GO:0009610: response to symbiotic fungus | 3.82E-03 |
| 66 | GO:0048437: floral organ development | 3.82E-03 |
| 67 | GO:0010103: stomatal complex morphogenesis | 3.82E-03 |
| 68 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 3.82E-03 |
| 69 | GO:0010029: regulation of seed germination | 4.09E-03 |
| 70 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 4.44E-03 |
| 71 | GO:0042255: ribosome assembly | 4.44E-03 |
| 72 | GO:0006353: DNA-templated transcription, termination | 4.44E-03 |
| 73 | GO:0048766: root hair initiation | 4.44E-03 |
| 74 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 4.44E-03 |
| 75 | GO:0010439: regulation of glucosinolate biosynthetic process | 4.44E-03 |
| 76 | GO:0000105: histidine biosynthetic process | 4.44E-03 |
| 77 | GO:0040008: regulation of growth | 5.00E-03 |
| 78 | GO:0007186: G-protein coupled receptor signaling pathway | 5.08E-03 |
| 79 | GO:0010497: plasmodesmata-mediated intercellular transport | 5.08E-03 |
| 80 | GO:0007389: pattern specification process | 5.08E-03 |
| 81 | GO:0048767: root hair elongation | 5.30E-03 |
| 82 | GO:0000160: phosphorelay signal transduction system | 5.30E-03 |
| 83 | GO:0009451: RNA modification | 5.46E-03 |
| 84 | GO:0048507: meristem development | 5.75E-03 |
| 85 | GO:2000024: regulation of leaf development | 5.75E-03 |
| 86 | GO:0006783: heme biosynthetic process | 5.75E-03 |
| 87 | GO:0031425: chloroplast RNA processing | 6.46E-03 |
| 88 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.46E-03 |
| 89 | GO:0048829: root cap development | 7.20E-03 |
| 90 | GO:0030001: metal ion transport | 7.28E-03 |
| 91 | GO:0010015: root morphogenesis | 7.96E-03 |
| 92 | GO:0006816: calcium ion transport | 7.96E-03 |
| 93 | GO:0009682: induced systemic resistance | 7.96E-03 |
| 94 | GO:0048229: gametophyte development | 7.96E-03 |
| 95 | GO:0009640: photomorphogenesis | 8.24E-03 |
| 96 | GO:0010114: response to red light | 8.24E-03 |
| 97 | GO:0008361: regulation of cell size | 8.75E-03 |
| 98 | GO:0015706: nitrate transport | 8.75E-03 |
| 99 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 8.75E-03 |
| 100 | GO:0009826: unidimensional cell growth | 8.81E-03 |
| 101 | GO:0010588: cotyledon vascular tissue pattern formation | 9.57E-03 |
| 102 | GO:0010075: regulation of meristem growth | 9.57E-03 |
| 103 | GO:0010540: basipetal auxin transport | 1.04E-02 |
| 104 | GO:0009934: regulation of meristem structural organization | 1.04E-02 |
| 105 | GO:0042538: hyperosmotic salinity response | 1.04E-02 |
| 106 | GO:0010143: cutin biosynthetic process | 1.04E-02 |
| 107 | GO:0006541: glutamine metabolic process | 1.04E-02 |
| 108 | GO:0009664: plant-type cell wall organization | 1.04E-02 |
| 109 | GO:0009736: cytokinin-activated signaling pathway | 1.11E-02 |
| 110 | GO:0009723: response to ethylene | 1.11E-02 |
| 111 | GO:0080188: RNA-directed DNA methylation | 1.13E-02 |
| 112 | GO:0010167: response to nitrate | 1.13E-02 |
| 113 | GO:0090351: seedling development | 1.13E-02 |
| 114 | GO:0070588: calcium ion transmembrane transport | 1.13E-02 |
| 115 | GO:0006071: glycerol metabolic process | 1.22E-02 |
| 116 | GO:0006863: purine nucleobase transport | 1.22E-02 |
| 117 | GO:0009863: salicylic acid mediated signaling pathway | 1.31E-02 |
| 118 | GO:0010187: negative regulation of seed germination | 1.31E-02 |
| 119 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.31E-02 |
| 120 | GO:0080147: root hair cell development | 1.31E-02 |
| 121 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.31E-02 |
| 122 | GO:0006874: cellular calcium ion homeostasis | 1.41E-02 |
| 123 | GO:0010073: meristem maintenance | 1.41E-02 |
| 124 | GO:0006825: copper ion transport | 1.41E-02 |
| 125 | GO:0009740: gibberellic acid mediated signaling pathway | 1.50E-02 |
| 126 | GO:0003333: amino acid transmembrane transport | 1.50E-02 |
| 127 | GO:0031348: negative regulation of defense response | 1.60E-02 |
| 128 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.71E-02 |
| 129 | GO:0071215: cellular response to abscisic acid stimulus | 1.71E-02 |
| 130 | GO:0010082: regulation of root meristem growth | 1.71E-02 |
| 131 | GO:0009625: response to insect | 1.71E-02 |
| 132 | GO:0006284: base-excision repair | 1.81E-02 |
| 133 | GO:0070417: cellular response to cold | 1.92E-02 |
| 134 | GO:0048653: anther development | 2.02E-02 |
| 135 | GO:0042631: cellular response to water deprivation | 2.02E-02 |
| 136 | GO:0010087: phloem or xylem histogenesis | 2.02E-02 |
| 137 | GO:0009741: response to brassinosteroid | 2.14E-02 |
| 138 | GO:0010305: leaf vascular tissue pattern formation | 2.14E-02 |
| 139 | GO:0009958: positive gravitropism | 2.14E-02 |
| 140 | GO:0009646: response to absence of light | 2.25E-02 |
| 141 | GO:0009790: embryo development | 2.33E-02 |
| 142 | GO:0009791: post-embryonic development | 2.36E-02 |
| 143 | GO:0080156: mitochondrial mRNA modification | 2.48E-02 |
| 144 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.48E-02 |
| 145 | GO:0071554: cell wall organization or biogenesis | 2.48E-02 |
| 146 | GO:0032502: developmental process | 2.60E-02 |
| 147 | GO:0009630: gravitropism | 2.60E-02 |
| 148 | GO:0019761: glucosinolate biosynthetic process | 2.60E-02 |
| 149 | GO:0071281: cellular response to iron ion | 2.72E-02 |
| 150 | GO:0010090: trichome morphogenesis | 2.72E-02 |
| 151 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.83E-02 |
| 152 | GO:0007267: cell-cell signaling | 2.97E-02 |
| 153 | GO:0001666: response to hypoxia | 3.23E-02 |
| 154 | GO:0010027: thylakoid membrane organization | 3.23E-02 |
| 155 | GO:0008380: RNA splicing | 3.28E-02 |
| 156 | GO:0009617: response to bacterium | 3.28E-02 |
| 157 | GO:0015995: chlorophyll biosynthetic process | 3.62E-02 |
| 158 | GO:0030154: cell differentiation | 3.68E-02 |
| 159 | GO:0048481: plant ovule development | 3.90E-02 |
| 160 | GO:0010311: lateral root formation | 4.04E-02 |
| 161 | GO:0009832: plant-type cell wall biogenesis | 4.04E-02 |
| 162 | GO:0006811: ion transport | 4.18E-02 |
| 163 | GO:0010218: response to far red light | 4.18E-02 |
| 164 | GO:0009910: negative regulation of flower development | 4.32E-02 |
| 165 | GO:0009631: cold acclimation | 4.32E-02 |
| 166 | GO:0010119: regulation of stomatal movement | 4.32E-02 |
| 167 | GO:0006865: amino acid transport | 4.46E-02 |
| 168 | GO:0009867: jasmonic acid mediated signaling pathway | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016805: dipeptidase activity | 1.05E-05 |
| 2 | GO:0004016: adenylate cyclase activity | 2.51E-04 |
| 3 | GO:0004400: histidinol-phosphate transaminase activity | 2.51E-04 |
| 4 | GO:0005290: L-histidine transmembrane transporter activity | 2.51E-04 |
| 5 | GO:0004071: aspartate-ammonia ligase activity | 2.51E-04 |
| 6 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 2.51E-04 |
| 7 | GO:0009672: auxin:proton symporter activity | 4.10E-04 |
| 8 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 5.53E-04 |
| 9 | GO:0008805: carbon-monoxide oxygenase activity | 5.53E-04 |
| 10 | GO:0000064: L-ornithine transmembrane transporter activity | 5.53E-04 |
| 11 | GO:0009884: cytokinin receptor activity | 5.53E-04 |
| 12 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 5.53E-04 |
| 13 | GO:0004150: dihydroneopterin aldolase activity | 5.53E-04 |
| 14 | GO:0004103: choline kinase activity | 5.53E-04 |
| 15 | GO:0010329: auxin efflux transmembrane transporter activity | 7.18E-04 |
| 16 | GO:0004180: carboxypeptidase activity | 8.99E-04 |
| 17 | GO:0052722: fatty acid in-chain hydroxylase activity | 8.99E-04 |
| 18 | GO:0045548: phenylalanine ammonia-lyase activity | 8.99E-04 |
| 19 | GO:0005034: osmosensor activity | 8.99E-04 |
| 20 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.22E-03 |
| 21 | GO:0001872: (1->3)-beta-D-glucan binding | 1.28E-03 |
| 22 | GO:0015189: L-lysine transmembrane transporter activity | 1.28E-03 |
| 23 | GO:0015181: arginine transmembrane transporter activity | 1.28E-03 |
| 24 | GO:0043495: protein anchor | 1.71E-03 |
| 25 | GO:0004930: G-protein coupled receptor activity | 1.71E-03 |
| 26 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.71E-03 |
| 27 | GO:0016279: protein-lysine N-methyltransferase activity | 1.71E-03 |
| 28 | GO:0003727: single-stranded RNA binding | 1.73E-03 |
| 29 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.19E-03 |
| 30 | GO:0004523: RNA-DNA hybrid ribonuclease activity | 2.19E-03 |
| 31 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.70E-03 |
| 32 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.24E-03 |
| 33 | GO:0016832: aldehyde-lyase activity | 3.24E-03 |
| 34 | GO:0019900: kinase binding | 3.24E-03 |
| 35 | GO:0004871: signal transducer activity | 3.72E-03 |
| 36 | GO:0005215: transporter activity | 3.76E-03 |
| 37 | GO:0004519: endonuclease activity | 5.41E-03 |
| 38 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 5.75E-03 |
| 39 | GO:0000989: transcription factor activity, transcription factor binding | 5.75E-03 |
| 40 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 6.39E-03 |
| 41 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 6.98E-03 |
| 42 | GO:0004673: protein histidine kinase activity | 7.20E-03 |
| 43 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.96E-03 |
| 44 | GO:0043621: protein self-association | 8.92E-03 |
| 45 | GO:0000155: phosphorelay sensor kinase activity | 9.57E-03 |
| 46 | GO:0005262: calcium channel activity | 9.57E-03 |
| 47 | GO:0003725: double-stranded RNA binding | 9.57E-03 |
| 48 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.57E-03 |
| 49 | GO:0031072: heat shock protein binding | 9.57E-03 |
| 50 | GO:0005217: intracellular ligand-gated ion channel activity | 1.13E-02 |
| 51 | GO:0004970: ionotropic glutamate receptor activity | 1.13E-02 |
| 52 | GO:0043565: sequence-specific DNA binding | 1.22E-02 |
| 53 | GO:0003723: RNA binding | 1.39E-02 |
| 54 | GO:0043424: protein histidine kinase binding | 1.41E-02 |
| 55 | GO:0004707: MAP kinase activity | 1.50E-02 |
| 56 | GO:0033612: receptor serine/threonine kinase binding | 1.50E-02 |
| 57 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.53E-02 |
| 58 | GO:0022891: substrate-specific transmembrane transporter activity | 1.71E-02 |
| 59 | GO:0030570: pectate lyase activity | 1.71E-02 |
| 60 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.75E-02 |
| 61 | GO:0019843: rRNA binding | 1.99E-02 |
| 62 | GO:0001085: RNA polymerase II transcription factor binding | 2.14E-02 |
| 63 | GO:0010181: FMN binding | 2.25E-02 |
| 64 | GO:0019901: protein kinase binding | 2.36E-02 |
| 65 | GO:0015144: carbohydrate transmembrane transporter activity | 2.38E-02 |
| 66 | GO:0004518: nuclease activity | 2.60E-02 |
| 67 | GO:0005351: sugar:proton symporter activity | 2.69E-02 |
| 68 | GO:0000156: phosphorelay response regulator activity | 2.72E-02 |
| 69 | GO:0016759: cellulose synthase activity | 2.85E-02 |
| 70 | GO:0008237: metallopeptidase activity | 2.97E-02 |
| 71 | GO:0016413: O-acetyltransferase activity | 3.10E-02 |
| 72 | GO:0051213: dioxygenase activity | 3.23E-02 |
| 73 | GO:0044212: transcription regulatory region DNA binding | 3.25E-02 |
| 74 | GO:0003735: structural constituent of ribosome | 3.31E-02 |
| 75 | GO:0030247: polysaccharide binding | 3.62E-02 |
| 76 | GO:0015238: drug transmembrane transporter activity | 4.04E-02 |
| 77 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.32E-02 |
| 78 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.32E-02 |
| 79 | GO:0003697: single-stranded DNA binding | 4.61E-02 |
| 80 | GO:0046983: protein dimerization activity | 4.93E-02 |