Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G09900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000505: regulation of energy homeostasis0.00E+00
2GO:0042407: cristae formation0.00E+00
3GO:0031426: polycistronic mRNA processing2.76E-05
4GO:0071028: nuclear mRNA surveillance2.76E-05
5GO:0043266: regulation of potassium ion transport2.76E-05
6GO:0006659: phosphatidylserine biosynthetic process2.76E-05
7GO:2000021: regulation of ion homeostasis2.76E-05
8GO:1902458: positive regulation of stomatal opening2.76E-05
9GO:0006177: GMP biosynthetic process2.76E-05
10GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation7.01E-05
11GO:0090342: regulation of cell aging7.01E-05
12GO:0031125: rRNA 3'-end processing7.01E-05
13GO:1903426: regulation of reactive oxygen species biosynthetic process7.01E-05
14GO:0071051: polyadenylation-dependent snoRNA 3'-end processing7.01E-05
15GO:0034475: U4 snRNA 3'-end processing7.01E-05
16GO:0006423: cysteinyl-tRNA aminoacylation7.01E-05
17GO:0016075: rRNA catabolic process1.23E-04
18GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'1.23E-04
19GO:0009791: post-embryonic development1.36E-04
20GO:2001289: lipid X metabolic process1.83E-04
21GO:0010239: chloroplast mRNA processing1.83E-04
22GO:0006021: inositol biosynthetic process2.48E-04
23GO:0045038: protein import into chloroplast thylakoid membrane3.18E-04
24GO:0010190: cytochrome b6f complex assembly3.92E-04
25GO:0010264: myo-inositol hexakisphosphate biosynthetic process3.92E-04
26GO:0016554: cytidine to uridine editing3.92E-04
27GO:0009648: photoperiodism4.69E-04
28GO:0010310: regulation of hydrogen peroxide metabolic process4.69E-04
29GO:0010196: nonphotochemical quenching5.49E-04
30GO:2000070: regulation of response to water deprivation6.32E-04
31GO:0009245: lipid A biosynthetic process8.07E-04
32GO:0048507: meristem development8.07E-04
33GO:0043067: regulation of programmed cell death8.99E-04
34GO:1900865: chloroplast RNA modification8.99E-04
35GO:0010629: negative regulation of gene expression9.92E-04
36GO:0019684: photosynthesis, light reaction1.09E-03
37GO:0009089: lysine biosynthetic process via diaminopimelate1.09E-03
38GO:1903507: negative regulation of nucleic acid-templated transcription1.09E-03
39GO:0090351: seedling development1.50E-03
40GO:2000022: regulation of jasmonic acid mediated signaling pathway2.09E-03
41GO:0009306: protein secretion2.35E-03
42GO:0010197: polar nucleus fusion2.74E-03
43GO:0008654: phospholipid biosynthetic process3.02E-03
44GO:0000302: response to reactive oxygen species3.16E-03
45GO:1901657: glycosyl compound metabolic process3.45E-03
46GO:0016126: sterol biosynthetic process4.06E-03
47GO:0008152: metabolic process4.44E-03
48GO:0031347: regulation of defense response7.79E-03
49GO:0042538: hyperosmotic salinity response7.99E-03
50GO:0006396: RNA processing1.10E-02
51GO:0009845: seed germination1.33E-02
52GO:0007623: circadian rhythm1.58E-02
53GO:0010468: regulation of gene expression1.79E-02
54GO:0048366: leaf development2.42E-02
55GO:0046777: protein autophosphorylation2.64E-02
56GO:0045454: cell redox homeostasis2.86E-02
57GO:0016042: lipid catabolic process3.25E-02
58GO:0016310: phosphorylation3.55E-02
59GO:0006508: proteolysis4.43E-02
60GO:0009735: response to cytokinin4.68E-02
RankGO TermAdjusted P value
1GO:0009029: tetraacyldisaccharide 4'-kinase activity0.00E+00
2GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
3GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity2.76E-05
4GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase7.01E-05
5GO:0009977: proton motive force dependent protein transmembrane transporter activity7.01E-05
6GO:0003938: IMP dehydrogenase activity7.01E-05
7GO:0004817: cysteine-tRNA ligase activity7.01E-05
8GO:0004512: inositol-3-phosphate synthase activity7.01E-05
9GO:0000254: C-4 methylsterol oxidase activity1.83E-04
10GO:0048027: mRNA 5'-UTR binding1.83E-04
11GO:0004040: amidase activity3.18E-04
12GO:0004017: adenylate kinase activity4.69E-04
13GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.69E-04
14GO:0016832: aldehyde-lyase activity4.69E-04
15GO:0000175: 3'-5'-exoribonuclease activity1.29E-03
16GO:0004190: aspartic-type endopeptidase activity1.50E-03
17GO:0003714: transcription corepressor activity1.73E-03
18GO:0008408: 3'-5' exonuclease activity1.97E-03
19GO:0003824: catalytic activity2.61E-03
20GO:0102483: scopolin beta-glucosidase activity4.54E-03
21GO:0016614: oxidoreductase activity, acting on CH-OH group of donors5.38E-03
22GO:0003993: acid phosphatase activity5.91E-03
23GO:0008422: beta-glucosidase activity6.09E-03
24GO:0016298: lipase activity8.60E-03
25GO:0005509: calcium ion binding1.33E-02
26GO:0004252: serine-type endopeptidase activity1.36E-02
27GO:0005524: ATP binding1.75E-02
28GO:0016788: hydrolase activity, acting on ester bonds2.19E-02
29GO:0050660: flavin adenine dinucleotide binding2.39E-02
30GO:0052689: carboxylic ester hydrolase activity2.70E-02
31GO:0016787: hydrolase activity3.10E-02
32GO:0004519: endonuclease activity3.52E-02
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Gene type



Gene DE type