Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G09350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006066: alcohol metabolic process0.00E+00
2GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation0.00E+00
3GO:0071484: cellular response to light intensity3.03E-06
4GO:0009768: photosynthesis, light harvesting in photosystem I6.41E-06
5GO:0016126: sterol biosynthetic process4.54E-05
6GO:0018298: protein-chromophore linkage6.84E-05
7GO:0042761: very long-chain fatty acid biosynthetic process7.35E-05
8GO:0006637: acyl-CoA metabolic process7.75E-05
9GO:0046900: tetrahydrofolylpolyglutamate metabolic process7.75E-05
10GO:0048640: negative regulation of developmental growth7.75E-05
11GO:0019510: S-adenosylhomocysteine catabolic process7.75E-05
12GO:0010218: response to far red light7.92E-05
13GO:0009637: response to blue light9.75E-05
14GO:0009644: response to high light intensity1.58E-04
15GO:0042819: vitamin B6 biosynthetic process1.85E-04
16GO:0033353: S-adenosylmethionine cycle1.85E-04
17GO:0006636: unsaturated fatty acid biosynthetic process2.04E-04
18GO:0031408: oxylipin biosynthetic process2.78E-04
19GO:0015714: phosphoenolpyruvate transport3.11E-04
20GO:0090391: granum assembly3.11E-04
21GO:0006081: cellular aldehyde metabolic process3.11E-04
22GO:0042823: pyridoxal phosphate biosynthetic process4.49E-04
23GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis4.49E-04
24GO:0008654: phospholipid biosynthetic process5.25E-04
25GO:0015713: phosphoglycerate transport5.98E-04
26GO:0006021: inositol biosynthetic process5.98E-04
27GO:0006183: GTP biosynthetic process5.98E-04
28GO:0010117: photoprotection7.57E-04
29GO:0010190: cytochrome b6f complex assembly9.24E-04
30GO:0010264: myo-inositol hexakisphosphate biosynthetic process9.24E-04
31GO:0055114: oxidation-reduction process9.39E-04
32GO:0010196: nonphotochemical quenching1.29E-03
33GO:0009769: photosynthesis, light harvesting in photosystem II1.29E-03
34GO:0050829: defense response to Gram-negative bacterium1.29E-03
35GO:0009645: response to low light intensity stimulus1.29E-03
36GO:0010114: response to red light1.65E-03
37GO:0032544: plastid translation1.69E-03
38GO:0071482: cellular response to light stimulus1.69E-03
39GO:0015979: photosynthesis1.82E-03
40GO:0010206: photosystem II repair1.91E-03
41GO:0034765: regulation of ion transmembrane transport1.91E-03
42GO:0009245: lipid A biosynthetic process1.91E-03
43GO:0010205: photoinhibition2.14E-03
44GO:0009698: phenylpropanoid metabolic process2.61E-03
45GO:0009773: photosynthetic electron transport in photosystem I2.61E-03
46GO:0015706: nitrate transport2.86E-03
47GO:0009767: photosynthetic electron transport chain3.12E-03
48GO:0010143: cutin biosynthetic process3.38E-03
49GO:0006541: glutamine metabolic process3.38E-03
50GO:0010207: photosystem II assembly3.38E-03
51GO:0009695: jasmonic acid biosynthetic process4.52E-03
52GO:0051302: regulation of cell division4.52E-03
53GO:0019953: sexual reproduction4.52E-03
54GO:0009269: response to desiccation4.82E-03
55GO:0006633: fatty acid biosynthetic process4.89E-03
56GO:0006730: one-carbon metabolic process5.13E-03
57GO:0030245: cellulose catabolic process5.13E-03
58GO:0009411: response to UV5.45E-03
59GO:0009625: response to insect5.45E-03
60GO:0042391: regulation of membrane potential6.44E-03
61GO:0006662: glycerol ether metabolic process6.78E-03
62GO:0006814: sodium ion transport7.13E-03
63GO:0009646: response to absence of light7.13E-03
64GO:0010193: response to ozone7.85E-03
65GO:0010583: response to cyclopentenone8.22E-03
66GO:0019761: glucosinolate biosynthetic process8.22E-03
67GO:0071805: potassium ion transmembrane transport9.36E-03
68GO:0051607: defense response to virus9.75E-03
69GO:0010027: thylakoid membrane organization1.02E-02
70GO:0080167: response to karrikin1.03E-02
71GO:0042128: nitrate assimilation1.10E-02
72GO:0006869: lipid transport1.35E-02
73GO:0034599: cellular response to oxidative stress1.49E-02
74GO:0008152: metabolic process1.68E-02
75GO:0042542: response to hydrogen peroxide1.68E-02
76GO:0006810: transport2.07E-02
77GO:0009585: red, far-red light phototransduction2.14E-02
78GO:0010224: response to UV-B2.19E-02
79GO:0006857: oligopeptide transport2.25E-02
80GO:0043086: negative regulation of catalytic activity2.41E-02
81GO:0042545: cell wall modification2.69E-02
82GO:0009416: response to light stimulus2.71E-02
83GO:0009624: response to nematode2.75E-02
84GO:0009611: response to wounding2.77E-02
85GO:0006396: RNA processing2.81E-02
86GO:0055085: transmembrane transport3.44E-02
87GO:0009790: embryo development3.61E-02
88GO:0016036: cellular response to phosphate starvation3.86E-02
89GO:0045490: pectin catabolic process4.06E-02
RankGO TermAdjusted P value
1GO:0046577: long-chain-alcohol oxidase activity0.00E+00
2GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity0.00E+00
3GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
4GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity0.00E+00
5GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
6GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
7GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
8GO:0031409: pigment binding4.46E-06
9GO:0004506: squalene monooxygenase activity5.79E-06
10GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water4.85E-05
11GO:0016168: chlorophyll binding4.94E-05
12GO:0015121: phosphoenolpyruvate:phosphate antiporter activity7.75E-05
13GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity7.75E-05
14GO:0004321: fatty-acyl-CoA synthase activity7.75E-05
15GO:0008242: omega peptidase activity7.75E-05
16GO:0030794: (S)-coclaurine-N-methyltransferase activity7.75E-05
17GO:0004451: isocitrate lyase activity7.75E-05
18GO:0004013: adenosylhomocysteinase activity7.75E-05
19GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.85E-04
20GO:0004512: inositol-3-phosphate synthase activity1.85E-04
21GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity1.85E-04
22GO:0034722: gamma-glutamyl-peptidase activity1.85E-04
23GO:0003938: IMP dehydrogenase activity1.85E-04
24GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity3.11E-04
25GO:0048038: quinone binding5.60E-04
26GO:0052793: pectin acetylesterase activity5.98E-04
27GO:0015120: phosphoglycerate transmembrane transporter activity5.98E-04
28GO:0016791: phosphatase activity6.75E-04
29GO:0004029: aldehyde dehydrogenase (NAD) activity9.24E-04
30GO:0031177: phosphopantetheine binding9.24E-04
31GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity9.24E-04
32GO:0000035: acyl binding1.10E-03
33GO:0005242: inward rectifier potassium channel activity1.10E-03
34GO:0050660: flavin adenine dinucleotide binding1.41E-03
35GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.48E-03
36GO:0071949: FAD binding1.91E-03
37GO:0016207: 4-coumarate-CoA ligase activity1.91E-03
38GO:0047617: acyl-CoA hydrolase activity2.14E-03
39GO:0015112: nitrate transmembrane transporter activity2.14E-03
40GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity2.14E-03
41GO:0004565: beta-galactosidase activity3.12E-03
42GO:0005315: inorganic phosphate transmembrane transporter activity3.12E-03
43GO:0016746: transferase activity, transferring acyl groups3.22E-03
44GO:0004725: protein tyrosine phosphatase activity3.94E-03
45GO:0016491: oxidoreductase activity4.20E-03
46GO:0003954: NADH dehydrogenase activity4.23E-03
47GO:0046910: pectinesterase inhibitor activity5.01E-03
48GO:0008810: cellulase activity5.45E-03
49GO:0008514: organic anion transmembrane transporter activity5.77E-03
50GO:0047134: protein-disulfide reductase activity6.10E-03
51GO:0030551: cyclic nucleotide binding6.44E-03
52GO:0005249: voltage-gated potassium channel activity6.44E-03
53GO:0008080: N-acetyltransferase activity6.78E-03
54GO:0042802: identical protein binding6.82E-03
55GO:0004791: thioredoxin-disulfide reductase activity7.13E-03
56GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor8.59E-03
57GO:0016787: hydrolase activity8.77E-03
58GO:0004721: phosphoprotein phosphatase activity1.14E-02
59GO:0052689: carboxylic ester hydrolase activity1.14E-02
60GO:0030145: manganese ion binding1.36E-02
61GO:0009055: electron carrier activity1.64E-02
62GO:0004185: serine-type carboxypeptidase activity1.73E-02
63GO:0015293: symporter activity1.88E-02
64GO:0051287: NAD binding1.98E-02
65GO:0008289: lipid binding2.12E-02
66GO:0016298: lipase activity2.19E-02
67GO:0045330: aspartyl esterase activity2.30E-02
68GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.47E-02
69GO:0016874: ligase activity2.64E-02
70GO:0030599: pectinesterase activity2.64E-02
71GO:0015035: protein disulfide oxidoreductase activity2.81E-02
72GO:0016829: lyase activity3.42E-02
73GO:0015144: carbohydrate transmembrane transporter activity3.67E-02
74GO:0015297: antiporter activity3.93E-02
75GO:0005351: sugar:proton symporter activity3.99E-02
76GO:0008194: UDP-glycosyltransferase activity4.40E-02
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Gene type



Gene DE type