Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G04955

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904277: negative regulation of wax biosynthetic process0.00E+00
2GO:1901698: response to nitrogen compound0.00E+00
3GO:0010480: microsporocyte differentiation2.64E-05
4GO:0051013: microtubule severing2.64E-05
5GO:0001736: establishment of planar polarity6.72E-05
6GO:0018022: peptidyl-lysine methylation6.72E-05
7GO:0009958: positive gravitropism1.09E-04
8GO:0071705: nitrogen compound transport1.18E-04
9GO:0019760: glucosinolate metabolic process1.69E-04
10GO:0009800: cinnamic acid biosynthetic process1.76E-04
11GO:0009650: UV protection1.76E-04
12GO:0071249: cellular response to nitrate2.39E-04
13GO:0009723: response to ethylene2.43E-04
14GO:0071493: cellular response to UV-B3.07E-04
15GO:0006559: L-phenylalanine catabolic process3.78E-04
16GO:0006596: polyamine biosynthetic process3.78E-04
17GO:0048759: xylem vessel member cell differentiation3.78E-04
18GO:0009926: auxin polar transport4.38E-04
19GO:0010444: guard mother cell differentiation5.30E-04
20GO:0048437: floral organ development5.30E-04
21GO:0009638: phototropism8.68E-04
22GO:0048829: root cap development9.59E-04
23GO:0010192: mucilage biosynthetic process9.59E-04
24GO:0048229: gametophyte development1.05E-03
25GO:0048765: root hair cell differentiation1.05E-03
26GO:0015706: nitrate transport1.15E-03
27GO:0010075: regulation of meristem growth1.25E-03
28GO:0009934: regulation of meristem structural organization1.35E-03
29GO:0010167: response to nitrate1.45E-03
30GO:0009825: multidimensional cell growth1.45E-03
31GO:0006071: glycerol metabolic process1.56E-03
32GO:0043622: cortical microtubule organization1.78E-03
33GO:0003333: amino acid transmembrane transport1.90E-03
34GO:0010017: red or far-red light signaling pathway2.02E-03
35GO:0010091: trichome branching2.26E-03
36GO:0042127: regulation of cell proliferation2.26E-03
37GO:0010087: phloem or xylem histogenesis2.52E-03
38GO:0048653: anther development2.52E-03
39GO:0000226: microtubule cytoskeleton organization2.52E-03
40GO:0046323: glucose import2.65E-03
41GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.69E-03
42GO:0071281: cellular response to iron ion3.33E-03
43GO:0006629: lipid metabolic process3.81E-03
44GO:0010311: lateral root formation4.85E-03
45GO:0009832: plant-type cell wall biogenesis4.85E-03
46GO:0009873: ethylene-activated signaling pathway4.91E-03
47GO:0010218: response to far red light5.02E-03
48GO:0009734: auxin-activated signaling pathway5.35E-03
49GO:0006865: amino acid transport5.35E-03
50GO:0006355: regulation of transcription, DNA-templated5.76E-03
51GO:0010114: response to red light6.57E-03
52GO:0031347: regulation of defense response7.50E-03
53GO:0009585: red, far-red light phototransduction8.08E-03
54GO:0048316: seed development9.29E-03
55GO:0009624: response to nematode1.03E-02
56GO:0051726: regulation of cell cycle1.08E-02
57GO:0071555: cell wall organization1.37E-02
58GO:0030154: cell differentiation1.49E-02
59GO:0009733: response to auxin1.54E-02
60GO:0009826: unidimensional cell growth2.02E-02
61GO:0007049: cell cycle2.24E-02
62GO:0080167: response to karrikin2.42E-02
63GO:0006468: protein phosphorylation2.88E-02
64GO:0016042: lipid catabolic process3.13E-02
65GO:0009751: response to salicylic acid3.16E-02
66GO:0009753: response to jasmonic acid3.36E-02
67GO:0006357: regulation of transcription from RNA polymerase II promoter3.90E-02
68GO:0016567: protein ubiquitination4.16E-02
69GO:0009416: response to light stimulus4.80E-02
70GO:0009611: response to wounding4.88E-02
RankGO TermAdjusted P value
1GO:0010487: thermospermine synthase activity0.00E+00
2GO:0008568: microtubule-severing ATPase activity2.64E-05
3GO:0016768: spermine synthase activity2.64E-05
4GO:0045548: phenylalanine ammonia-lyase activity1.18E-04
5GO:0005354: galactose transmembrane transporter activity1.76E-04
6GO:0016279: protein-lysine N-methyltransferase activity2.39E-04
7GO:0010011: auxin binding2.39E-04
8GO:0010328: auxin influx transmembrane transporter activity2.39E-04
9GO:0003700: transcription factor activity, sequence-specific DNA binding6.45E-04
10GO:0008970: phosphatidylcholine 1-acylhydrolase activity6.94E-04
11GO:0008889: glycerophosphodiester phosphodiesterase activity7.80E-04
12GO:0005089: Rho guanyl-nucleotide exchange factor activity1.05E-03
13GO:0000976: transcription regulatory region sequence-specific DNA binding1.15E-03
14GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.35E-03
15GO:0033612: receptor serine/threonine kinase binding1.90E-03
16GO:0044212: transcription regulatory region DNA binding2.17E-03
17GO:0005355: glucose transmembrane transporter activity2.78E-03
18GO:0004871: signal transducer activity3.25E-03
19GO:0016759: cellulose synthase activity3.47E-03
20GO:0043565: sequence-specific DNA binding3.88E-03
21GO:0004806: triglyceride lipase activity4.37E-03
22GO:0004693: cyclin-dependent protein serine/threonine kinase activity5.02E-03
23GO:0004712: protein serine/threonine/tyrosine kinase activity5.86E-03
24GO:0051537: 2 iron, 2 sulfur cluster binding6.94E-03
25GO:0043621: protein self-association6.94E-03
26GO:0015293: symporter activity7.12E-03
27GO:0015171: amino acid transmembrane transporter activity8.68E-03
28GO:0003677: DNA binding8.73E-03
29GO:0005516: calmodulin binding1.01E-02
30GO:0005515: protein binding1.10E-02
31GO:0003676: nucleic acid binding1.30E-02
32GO:0015144: carbohydrate transmembrane transporter activity1.38E-02
33GO:0005351: sugar:proton symporter activity1.50E-02
34GO:0008017: microtubule binding1.57E-02
35GO:0008194: UDP-glycosyltransferase activity1.65E-02
36GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.75E-02
37GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.97E-02
38GO:0008289: lipid binding4.04E-02
39GO:0016757: transferase activity, transferring glycosyl groups4.65E-02
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Gene type



Gene DE type