GO Enrichment Analysis of Co-expressed Genes with
AT4G02990
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0035884: arabinan biosynthetic process | 0.00E+00 |
2 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
3 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
4 | GO:0080127: fruit septum development | 0.00E+00 |
5 | GO:0033206: meiotic cytokinesis | 0.00E+00 |
6 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
7 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
8 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
9 | GO:0033473: indoleacetic acid conjugate metabolic process | 0.00E+00 |
10 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
11 | GO:0009606: tropism | 0.00E+00 |
12 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
13 | GO:0042793: transcription from plastid promoter | 8.62E-06 |
14 | GO:0010569: regulation of double-strand break repair via homologous recombination | 1.28E-05 |
15 | GO:0009734: auxin-activated signaling pathway | 2.04E-05 |
16 | GO:0009416: response to light stimulus | 4.96E-05 |
17 | GO:1900864: mitochondrial RNA modification | 1.57E-04 |
18 | GO:2000038: regulation of stomatal complex development | 1.57E-04 |
19 | GO:0080188: RNA-directed DNA methylation | 2.76E-04 |
20 | GO:0009913: epidermal cell differentiation | 3.38E-04 |
21 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.69E-04 |
22 | GO:2000033: regulation of seed dormancy process | 4.50E-04 |
23 | GO:0048657: anther wall tapetum cell differentiation | 5.40E-04 |
24 | GO:1903866: palisade mesophyll development | 5.40E-04 |
25 | GO:0090063: positive regulation of microtubule nucleation | 5.40E-04 |
26 | GO:0010342: endosperm cellularization | 5.40E-04 |
27 | GO:0034757: negative regulation of iron ion transport | 5.40E-04 |
28 | GO:0009729: detection of brassinosteroid stimulus | 5.40E-04 |
29 | GO:1905039: carboxylic acid transmembrane transport | 5.40E-04 |
30 | GO:1905200: gibberellic acid transmembrane transport | 5.40E-04 |
31 | GO:0080112: seed growth | 5.40E-04 |
32 | GO:0043971: histone H3-K18 acetylation | 5.40E-04 |
33 | GO:0006955: immune response | 5.77E-04 |
34 | GO:0046620: regulation of organ growth | 7.18E-04 |
35 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 7.18E-04 |
36 | GO:0009658: chloroplast organization | 7.21E-04 |
37 | GO:0010271: regulation of chlorophyll catabolic process | 1.16E-03 |
38 | GO:0009662: etioplast organization | 1.16E-03 |
39 | GO:1900033: negative regulation of trichome patterning | 1.16E-03 |
40 | GO:2000071: regulation of defense response by callose deposition | 1.16E-03 |
41 | GO:0080009: mRNA methylation | 1.16E-03 |
42 | GO:2000123: positive regulation of stomatal complex development | 1.16E-03 |
43 | GO:1901529: positive regulation of anion channel activity | 1.16E-03 |
44 | GO:0033566: gamma-tubulin complex localization | 1.16E-03 |
45 | GO:1900865: chloroplast RNA modification | 1.23E-03 |
46 | GO:0009451: RNA modification | 1.37E-03 |
47 | GO:0048829: root cap development | 1.44E-03 |
48 | GO:1900140: regulation of seedling development | 1.91E-03 |
49 | GO:0001578: microtubule bundle formation | 1.91E-03 |
50 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 1.91E-03 |
51 | GO:0080117: secondary growth | 1.91E-03 |
52 | GO:0090391: granum assembly | 1.91E-03 |
53 | GO:0006518: peptide metabolic process | 1.91E-03 |
54 | GO:0009733: response to auxin | 1.95E-03 |
55 | GO:0010029: regulation of seed germination | 2.02E-03 |
56 | GO:0009793: embryo development ending in seed dormancy | 2.10E-03 |
57 | GO:0010588: cotyledon vascular tissue pattern formation | 2.17E-03 |
58 | GO:1901332: negative regulation of lateral root development | 2.76E-03 |
59 | GO:1902290: positive regulation of defense response to oomycetes | 2.76E-03 |
60 | GO:0010371: regulation of gibberellin biosynthetic process | 2.76E-03 |
61 | GO:1902476: chloride transmembrane transport | 2.76E-03 |
62 | GO:0010239: chloroplast mRNA processing | 2.76E-03 |
63 | GO:0007276: gamete generation | 2.76E-03 |
64 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 2.76E-03 |
65 | GO:0009800: cinnamic acid biosynthetic process | 2.76E-03 |
66 | GO:0010187: negative regulation of seed germination | 3.40E-03 |
67 | GO:0009863: salicylic acid mediated signaling pathway | 3.40E-03 |
68 | GO:0009867: jasmonic acid mediated signaling pathway | 3.58E-03 |
69 | GO:0006346: methylation-dependent chromatin silencing | 3.72E-03 |
70 | GO:0006808: regulation of nitrogen utilization | 3.72E-03 |
71 | GO:0006479: protein methylation | 3.72E-03 |
72 | GO:0048629: trichome patterning | 3.72E-03 |
73 | GO:0060548: negative regulation of cell death | 3.72E-03 |
74 | GO:0051322: anaphase | 3.72E-03 |
75 | GO:0000914: phragmoplast assembly | 3.72E-03 |
76 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.72E-03 |
77 | GO:0003333: amino acid transmembrane transport | 4.13E-03 |
78 | GO:0016998: cell wall macromolecule catabolic process | 4.13E-03 |
79 | GO:0030001: metal ion transport | 4.23E-03 |
80 | GO:0048497: maintenance of floral organ identity | 4.78E-03 |
81 | GO:0032876: negative regulation of DNA endoreduplication | 4.78E-03 |
82 | GO:0030308: negative regulation of cell growth | 4.78E-03 |
83 | GO:0010375: stomatal complex patterning | 4.78E-03 |
84 | GO:0080110: sporopollenin biosynthetic process | 4.78E-03 |
85 | GO:0016131: brassinosteroid metabolic process | 4.78E-03 |
86 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.93E-03 |
87 | GO:0009926: auxin polar transport | 4.95E-03 |
88 | GO:0040008: regulation of growth | 5.22E-03 |
89 | GO:0010584: pollen exine formation | 5.37E-03 |
90 | GO:0003006: developmental process involved in reproduction | 5.92E-03 |
91 | GO:0006559: L-phenylalanine catabolic process | 5.92E-03 |
92 | GO:0009643: photosynthetic acclimation | 5.92E-03 |
93 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 5.92E-03 |
94 | GO:0016554: cytidine to uridine editing | 5.92E-03 |
95 | GO:1902456: regulation of stomatal opening | 5.92E-03 |
96 | GO:0042176: regulation of protein catabolic process | 5.92E-03 |
97 | GO:0048831: regulation of shoot system development | 5.92E-03 |
98 | GO:0010315: auxin efflux | 5.92E-03 |
99 | GO:0010087: phloem or xylem histogenesis | 6.30E-03 |
100 | GO:0010118: stomatal movement | 6.30E-03 |
101 | GO:0006351: transcription, DNA-templated | 6.52E-03 |
102 | GO:0010305: leaf vascular tissue pattern formation | 6.79E-03 |
103 | GO:0010268: brassinosteroid homeostasis | 6.79E-03 |
104 | GO:0048509: regulation of meristem development | 7.16E-03 |
105 | GO:2000037: regulation of stomatal complex patterning | 7.16E-03 |
106 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 7.16E-03 |
107 | GO:0010310: regulation of hydrogen peroxide metabolic process | 7.16E-03 |
108 | GO:0009955: adaxial/abaxial pattern specification | 7.16E-03 |
109 | GO:0071470: cellular response to osmotic stress | 7.16E-03 |
110 | GO:0000911: cytokinesis by cell plate formation | 7.16E-03 |
111 | GO:0006364: rRNA processing | 7.26E-03 |
112 | GO:0048825: cotyledon development | 7.85E-03 |
113 | GO:0080156: mitochondrial mRNA modification | 8.41E-03 |
114 | GO:0010103: stomatal complex morphogenesis | 8.47E-03 |
115 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 8.47E-03 |
116 | GO:0006401: RNA catabolic process | 8.47E-03 |
117 | GO:0006821: chloride transport | 8.47E-03 |
118 | GO:0048367: shoot system development | 9.37E-03 |
119 | GO:0010090: trichome morphogenesis | 9.59E-03 |
120 | GO:0042255: ribosome assembly | 9.87E-03 |
121 | GO:0006353: DNA-templated transcription, termination | 9.87E-03 |
122 | GO:0048766: root hair initiation | 9.87E-03 |
123 | GO:0010492: maintenance of shoot apical meristem identity | 9.87E-03 |
124 | GO:0000105: histidine biosynthetic process | 9.87E-03 |
125 | GO:0052543: callose deposition in cell wall | 9.87E-03 |
126 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 9.87E-03 |
127 | GO:0009642: response to light intensity | 9.87E-03 |
128 | GO:0010252: auxin homeostasis | 1.02E-02 |
129 | GO:0009828: plant-type cell wall loosening | 1.02E-02 |
130 | GO:0009740: gibberellic acid mediated signaling pathway | 1.06E-02 |
131 | GO:0032544: plastid translation | 1.13E-02 |
132 | GO:0007389: pattern specification process | 1.13E-02 |
133 | GO:0044030: regulation of DNA methylation | 1.13E-02 |
134 | GO:0009827: plant-type cell wall modification | 1.13E-02 |
135 | GO:0019430: removal of superoxide radicals | 1.13E-02 |
136 | GO:0007186: G-protein coupled receptor signaling pathway | 1.13E-02 |
137 | GO:0010233: phloem transport | 1.13E-02 |
138 | GO:0000910: cytokinesis | 1.15E-02 |
139 | GO:0006355: regulation of transcription, DNA-templated | 1.22E-02 |
140 | GO:0048507: meristem development | 1.29E-02 |
141 | GO:0048589: developmental growth | 1.29E-02 |
142 | GO:0098656: anion transmembrane transport | 1.29E-02 |
143 | GO:0009245: lipid A biosynthetic process | 1.29E-02 |
144 | GO:1900426: positive regulation of defense response to bacterium | 1.45E-02 |
145 | GO:0042761: very long-chain fatty acid biosynthetic process | 1.45E-02 |
146 | GO:0006349: regulation of gene expression by genetic imprinting | 1.45E-02 |
147 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.59E-02 |
148 | GO:0006535: cysteine biosynthetic process from serine | 1.62E-02 |
149 | GO:0006949: syncytium formation | 1.62E-02 |
150 | GO:0031627: telomeric loop formation | 1.62E-02 |
151 | GO:0010048: vernalization response | 1.62E-02 |
152 | GO:0048767: root hair elongation | 1.68E-02 |
153 | GO:0010218: response to far red light | 1.77E-02 |
154 | GO:0015770: sucrose transport | 1.80E-02 |
155 | GO:0009750: response to fructose | 1.80E-02 |
156 | GO:0048229: gametophyte development | 1.80E-02 |
157 | GO:0048765: root hair cell differentiation | 1.80E-02 |
158 | GO:0046856: phosphatidylinositol dephosphorylation | 1.80E-02 |
159 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.80E-02 |
160 | GO:0009682: induced systemic resistance | 1.80E-02 |
161 | GO:0006865: amino acid transport | 1.94E-02 |
162 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 1.98E-02 |
163 | GO:0010582: floral meristem determinacy | 1.98E-02 |
164 | GO:0008361: regulation of cell size | 1.98E-02 |
165 | GO:0012501: programmed cell death | 1.98E-02 |
166 | GO:0010152: pollen maturation | 1.98E-02 |
167 | GO:0010102: lateral root morphogenesis | 2.17E-02 |
168 | GO:0006270: DNA replication initiation | 2.36E-02 |
169 | GO:0009887: animal organ morphogenesis | 2.36E-02 |
170 | GO:0010540: basipetal auxin transport | 2.36E-02 |
171 | GO:0048467: gynoecium development | 2.36E-02 |
172 | GO:0010020: chloroplast fission | 2.36E-02 |
173 | GO:0032259: methylation | 2.54E-02 |
174 | GO:0009901: anther dehiscence | 2.56E-02 |
175 | GO:0009739: response to gibberellin | 2.63E-02 |
176 | GO:0006281: DNA repair | 2.70E-02 |
177 | GO:0006071: glycerol metabolic process | 2.77E-02 |
178 | GO:0019344: cysteine biosynthetic process | 2.98E-02 |
179 | GO:0080147: root hair cell development | 2.98E-02 |
180 | GO:0031347: regulation of defense response | 3.17E-02 |
181 | GO:0010073: meristem maintenance | 3.20E-02 |
182 | GO:0006825: copper ion transport | 3.20E-02 |
183 | GO:0006874: cellular calcium ion homeostasis | 3.20E-02 |
184 | GO:0009664: plant-type cell wall organization | 3.29E-02 |
185 | GO:0042538: hyperosmotic salinity response | 3.29E-02 |
186 | GO:0010431: seed maturation | 3.42E-02 |
187 | GO:0006306: DNA methylation | 3.42E-02 |
188 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 3.65E-02 |
189 | GO:0009826: unidimensional cell growth | 3.76E-02 |
190 | GO:0071215: cellular response to abscisic acid stimulus | 3.88E-02 |
191 | GO:0010082: regulation of root meristem growth | 3.88E-02 |
192 | GO:0042127: regulation of cell proliferation | 4.12E-02 |
193 | GO:0048443: stamen development | 4.12E-02 |
194 | GO:0006284: base-excision repair | 4.12E-02 |
195 | GO:0070417: cellular response to cold | 4.36E-02 |
196 | GO:0042335: cuticle development | 4.61E-02 |
197 | GO:0080022: primary root development | 4.61E-02 |
198 | GO:0008033: tRNA processing | 4.61E-02 |
199 | GO:0010501: RNA secondary structure unwinding | 4.61E-02 |
200 | GO:0042631: cellular response to water deprivation | 4.61E-02 |
201 | GO:0000226: microtubule cytoskeleton organization | 4.61E-02 |
202 | GO:0009723: response to ethylene | 4.71E-02 |
203 | GO:0009741: response to brassinosteroid | 4.86E-02 |
204 | GO:0009960: endosperm development | 4.86E-02 |
205 | GO:0009958: positive gravitropism | 4.86E-02 |
206 | GO:0071472: cellular response to salt stress | 4.86E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
2 | GO:0042834: peptidoglycan binding | 0.00E+00 |
3 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
4 | GO:0003723: RNA binding | 6.93E-06 |
5 | GO:0008395: steroid hydroxylase activity | 5.40E-04 |
6 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 5.40E-04 |
7 | GO:0004016: adenylate cyclase activity | 5.40E-04 |
8 | GO:0004400: histidinol-phosphate transaminase activity | 5.40E-04 |
9 | GO:1905201: gibberellin transmembrane transporter activity | 5.40E-04 |
10 | GO:0008836: diaminopimelate decarboxylase activity | 5.40E-04 |
11 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 5.40E-04 |
12 | GO:0016274: protein-arginine N-methyltransferase activity | 5.40E-04 |
13 | GO:0003697: single-stranded DNA binding | 6.09E-04 |
14 | GO:0004519: endonuclease activity | 8.17E-04 |
15 | GO:0000989: transcription factor activity, transcription factor binding | 1.04E-03 |
16 | GO:0019901: protein kinase binding | 1.08E-03 |
17 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.16E-03 |
18 | GO:0009884: cytokinin receptor activity | 1.16E-03 |
19 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 1.16E-03 |
20 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.16E-03 |
21 | GO:0009672: auxin:proton symporter activity | 1.23E-03 |
22 | GO:0070181: small ribosomal subunit rRNA binding | 1.91E-03 |
23 | GO:0016805: dipeptidase activity | 1.91E-03 |
24 | GO:0005034: osmosensor activity | 1.91E-03 |
25 | GO:0017150: tRNA dihydrouridine synthase activity | 1.91E-03 |
26 | GO:0045548: phenylalanine ammonia-lyase activity | 1.91E-03 |
27 | GO:0010329: auxin efflux transmembrane transporter activity | 2.17E-03 |
28 | GO:0003725: double-stranded RNA binding | 2.17E-03 |
29 | GO:0008168: methyltransferase activity | 2.66E-03 |
30 | GO:0003677: DNA binding | 2.75E-03 |
31 | GO:0001872: (1->3)-beta-D-glucan binding | 2.76E-03 |
32 | GO:0009041: uridylate kinase activity | 2.76E-03 |
33 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 3.41E-03 |
34 | GO:0005253: anion channel activity | 3.72E-03 |
35 | GO:0004930: G-protein coupled receptor activity | 3.72E-03 |
36 | GO:0010011: auxin binding | 3.72E-03 |
37 | GO:0010328: auxin influx transmembrane transporter activity | 3.72E-03 |
38 | GO:0010385: double-stranded methylated DNA binding | 3.72E-03 |
39 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 4.18E-03 |
40 | GO:0043565: sequence-specific DNA binding | 4.44E-03 |
41 | GO:0005496: steroid binding | 4.78E-03 |
42 | GO:0008725: DNA-3-methyladenine glycosylase activity | 4.78E-03 |
43 | GO:0030570: pectate lyase activity | 4.93E-03 |
44 | GO:0003727: single-stranded RNA binding | 5.37E-03 |
45 | GO:0004784: superoxide dismutase activity | 5.92E-03 |
46 | GO:0009378: four-way junction helicase activity | 5.92E-03 |
47 | GO:0005247: voltage-gated chloride channel activity | 5.92E-03 |
48 | GO:0003688: DNA replication origin binding | 5.92E-03 |
49 | GO:0080030: methyl indole-3-acetate esterase activity | 5.92E-03 |
50 | GO:0043140: ATP-dependent 3'-5' DNA helicase activity | 5.92E-03 |
51 | GO:0031177: phosphopantetheine binding | 5.92E-03 |
52 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 5.92E-03 |
53 | GO:0004871: signal transducer activity | 6.20E-03 |
54 | GO:0001085: RNA polymerase II transcription factor binding | 6.79E-03 |
55 | GO:0019900: kinase binding | 7.16E-03 |
56 | GO:0004124: cysteine synthase activity | 7.16E-03 |
57 | GO:0000035: acyl binding | 7.16E-03 |
58 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 9.87E-03 |
59 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 9.87E-03 |
60 | GO:0008237: metallopeptidase activity | 1.09E-02 |
61 | GO:0008173: RNA methyltransferase activity | 1.13E-02 |
62 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 1.29E-02 |
63 | GO:0019843: rRNA binding | 1.52E-02 |
64 | GO:0004673: protein histidine kinase activity | 1.62E-02 |
65 | GO:0004222: metalloendopeptidase activity | 1.77E-02 |
66 | GO:0008559: xenobiotic-transporting ATPase activity | 1.80E-02 |
67 | GO:0004674: protein serine/threonine kinase activity | 1.80E-02 |
68 | GO:0003691: double-stranded telomeric DNA binding | 1.80E-02 |
69 | GO:0008515: sucrose transmembrane transporter activity | 1.80E-02 |
70 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.85E-02 |
71 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 1.98E-02 |
72 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.17E-02 |
73 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.17E-02 |
74 | GO:0031072: heat shock protein binding | 2.17E-02 |
75 | GO:0000155: phosphorelay sensor kinase activity | 2.17E-02 |
76 | GO:0009982: pseudouridine synthase activity | 2.17E-02 |
77 | GO:0000175: 3'-5'-exoribonuclease activity | 2.17E-02 |
78 | GO:0008017: microtubule binding | 2.42E-02 |
79 | GO:0004970: ionotropic glutamate receptor activity | 2.56E-02 |
80 | GO:0051119: sugar transmembrane transporter activity | 2.56E-02 |
81 | GO:0005217: intracellular ligand-gated ion channel activity | 2.56E-02 |
82 | GO:0004190: aspartic-type endopeptidase activity | 2.56E-02 |
83 | GO:0043621: protein self-association | 2.84E-02 |
84 | GO:0015293: symporter activity | 2.95E-02 |
85 | GO:0005515: protein binding | 3.19E-02 |
86 | GO:0043424: protein histidine kinase binding | 3.20E-02 |
87 | GO:0015079: potassium ion transmembrane transporter activity | 3.20E-02 |
88 | GO:0004176: ATP-dependent peptidase activity | 3.42E-02 |
89 | GO:0004540: ribonuclease activity | 3.42E-02 |
90 | GO:0003690: double-stranded DNA binding | 3.66E-02 |
91 | GO:0003777: microtubule motor activity | 3.91E-02 |
92 | GO:0015171: amino acid transmembrane transporter activity | 3.91E-02 |
93 | GO:0016788: hydrolase activity, acting on ester bonds | 4.03E-02 |
94 | GO:0008514: organic anion transmembrane transporter activity | 4.12E-02 |
95 | GO:0003682: chromatin binding | 4.22E-02 |
96 | GO:0018024: histone-lysine N-methyltransferase activity | 4.36E-02 |
97 | GO:0008289: lipid binding | 4.37E-02 |
98 | GO:0004650: polygalacturonase activity | 4.58E-02 |
99 | GO:0004402: histone acetyltransferase activity | 4.61E-02 |
100 | GO:0003779: actin binding | 4.86E-02 |
101 | GO:0003713: transcription coactivator activity | 4.86E-02 |