Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G02740

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071435: potassium ion export0.00E+00
2GO:0001881: receptor recycling0.00E+00
3GO:0046909: intermembrane transport0.00E+00
4GO:0006144: purine nucleobase metabolic process4.45E-05
5GO:0071461: cellular response to redox state4.45E-05
6GO:0019628: urate catabolic process4.45E-05
7GO:0007031: peroxisome organization8.24E-05
8GO:0043132: NAD transport1.10E-04
9GO:0044375: regulation of peroxisome size1.89E-04
10GO:0008333: endosome to lysosome transport1.89E-04
11GO:0010118: stomatal movement2.05E-04
12GO:0010255: glucose mediated signaling pathway2.78E-04
13GO:0015858: nucleoside transport2.78E-04
14GO:0009963: positive regulation of flavonoid biosynthetic process2.78E-04
15GO:0048577: negative regulation of short-day photoperiodism, flowering2.78E-04
16GO:0080037: negative regulation of cytokinin-activated signaling pathway3.73E-04
17GO:1903830: magnesium ion transmembrane transport3.73E-04
18GO:0006950: response to stress4.68E-04
19GO:2000762: regulation of phenylpropanoid metabolic process4.75E-04
20GO:0032957: inositol trisphosphate metabolic process4.75E-04
21GO:0002238: response to molecule of fungal origin5.82E-04
22GO:0006014: D-ribose metabolic process5.82E-04
23GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly5.82E-04
24GO:0010264: myo-inositol hexakisphosphate biosynthetic process5.82E-04
25GO:0045040: protein import into mitochondrial outer membrane5.82E-04
26GO:0006120: mitochondrial electron transport, NADH to ubiquinone6.94E-04
27GO:0006887: exocytosis7.67E-04
28GO:0015693: magnesium ion transport8.11E-04
29GO:0006102: isocitrate metabolic process9.32E-04
30GO:0030162: regulation of proteolysis9.32E-04
31GO:0009051: pentose-phosphate shunt, oxidative branch1.19E-03
32GO:0008202: steroid metabolic process1.32E-03
33GO:0010105: negative regulation of ethylene-activated signaling pathway1.77E-03
34GO:0010102: lateral root morphogenesis1.92E-03
35GO:0010223: secondary shoot formation2.09E-03
36GO:0010540: basipetal auxin transport2.09E-03
37GO:0009934: regulation of meristem structural organization2.09E-03
38GO:0048768: root hair cell tip growth2.09E-03
39GO:0007034: vacuolar transport2.09E-03
40GO:0070588: calcium ion transmembrane transport2.25E-03
41GO:0080147: root hair cell development2.60E-03
42GO:0006511: ubiquitin-dependent protein catabolic process3.05E-03
43GO:0030433: ubiquitin-dependent ERAD pathway3.14E-03
44GO:0071456: cellular response to hypoxia3.14E-03
45GO:0010227: floral organ abscission3.33E-03
46GO:0006012: galactose metabolic process3.33E-03
47GO:0016117: carotenoid biosynthetic process3.73E-03
48GO:0042147: retrograde transport, endosome to Golgi3.73E-03
49GO:0042631: cellular response to water deprivation3.93E-03
50GO:0071472: cellular response to salt stress4.14E-03
51GO:0061025: membrane fusion4.35E-03
52GO:0006970: response to osmotic stress4.35E-03
53GO:0019252: starch biosynthetic process4.56E-03
54GO:0006623: protein targeting to vacuole4.56E-03
55GO:0002229: defense response to oomycetes4.77E-03
56GO:0009414: response to water deprivation4.90E-03
57GO:0045454: cell redox homeostasis5.99E-03
58GO:0042128: nitrate assimilation6.64E-03
59GO:0006906: vesicle fusion6.64E-03
60GO:0048767: root hair elongation7.65E-03
61GO:0009813: flavonoid biosynthetic process7.65E-03
62GO:0009910: negative regulation of flower development8.18E-03
63GO:0009853: photorespiration8.71E-03
64GO:0006099: tricarboxylic acid cycle8.99E-03
65GO:0006839: mitochondrial transport9.55E-03
66GO:0030001: metal ion transport9.55E-03
67GO:0006631: fatty acid metabolic process9.83E-03
68GO:0009926: auxin polar transport1.04E-02
69GO:0006855: drug transmembrane transport1.16E-02
70GO:0000165: MAPK cascade1.19E-02
71GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.19E-02
72GO:0009737: response to abscisic acid1.32E-02
73GO:0051603: proteolysis involved in cellular protein catabolic process1.32E-02
74GO:0045893: positive regulation of transcription, DNA-templated1.51E-02
75GO:0009624: response to nematode1.65E-02
76GO:0009058: biosynthetic process2.01E-02
77GO:0006413: translational initiation2.31E-02
78GO:0009651: response to salt stress2.34E-02
79GO:0045490: pectin catabolic process2.43E-02
80GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.63E-02
81GO:0010468: regulation of gene expression2.76E-02
82GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.14E-02
83GO:0015031: protein transport3.38E-02
84GO:0009723: response to ethylene3.68E-02
85GO:0080167: response to karrikin3.87E-02
86GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.96E-02
87GO:0016192: vesicle-mediated transport4.01E-02
88GO:0005975: carbohydrate metabolic process4.03E-02
89GO:0046777: protein autophosphorylation4.06E-02
90GO:0006869: lipid transport4.69E-02
RankGO TermAdjusted P value
1GO:0044610: FMN transmembrane transporter activity0.00E+00
2GO:0004846: urate oxidase activity0.00E+00
3GO:0015230: FAD transmembrane transporter activity4.45E-05
4GO:0008517: folic acid transporter activity1.10E-04
5GO:0015228: coenzyme A transmembrane transporter activity1.10E-04
6GO:0051724: NAD transporter activity1.10E-04
7GO:1990585: hydroxyproline O-arabinosyltransferase activity1.10E-04
8GO:0047325: inositol tetrakisphosphate 1-kinase activity1.89E-04
9GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity1.89E-04
10GO:0005504: fatty acid binding1.89E-04
11GO:0005524: ATP binding2.40E-04
12GO:0051740: ethylene binding2.78E-04
13GO:0017057: 6-phosphogluconolactonase activity2.78E-04
14GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.78E-04
15GO:0004449: isocitrate dehydrogenase (NAD+) activity2.78E-04
16GO:0102490: 8-oxo-dGTP phosphohydrolase activity3.73E-04
17GO:0045430: chalcone isomerase activity3.73E-04
18GO:0080122: AMP transmembrane transporter activity4.75E-04
19GO:0036402: proteasome-activating ATPase activity5.82E-04
20GO:0005347: ATP transmembrane transporter activity6.94E-04
21GO:0015217: ADP transmembrane transporter activity6.94E-04
22GO:0004747: ribokinase activity6.94E-04
23GO:0004714: transmembrane receptor protein tyrosine kinase activity9.32E-04
24GO:0004034: aldose 1-epimerase activity9.32E-04
25GO:0005544: calcium-dependent phospholipid binding9.32E-04
26GO:0008865: fructokinase activity9.32E-04
27GO:0008142: oxysterol binding1.06E-03
28GO:0004673: protein histidine kinase activity1.47E-03
29GO:0008559: xenobiotic-transporting ATPase activity1.61E-03
30GO:0008794: arsenate reductase (glutaredoxin) activity1.61E-03
31GO:0000976: transcription regulatory region sequence-specific DNA binding1.77E-03
32GO:0015095: magnesium ion transmembrane transporter activity1.92E-03
33GO:0000155: phosphorelay sensor kinase activity1.92E-03
34GO:0017025: TBP-class protein binding2.25E-03
35GO:0016787: hydrolase activity2.89E-03
36GO:0004298: threonine-type endopeptidase activity2.96E-03
37GO:0042802: identical protein binding3.33E-03
38GO:0000287: magnesium ion binding3.97E-03
39GO:0003713: transcription coactivator activity4.14E-03
40GO:0046873: metal ion transmembrane transporter activity4.14E-03
41GO:0016853: isomerase activity4.35E-03
42GO:0004872: receptor activity4.56E-03
43GO:0048038: quinone binding4.77E-03
44GO:0008137: NADH dehydrogenase (ubiquinone) activity4.77E-03
45GO:0003824: catalytic activity5.69E-03
46GO:0000149: SNARE binding9.27E-03
47GO:0051539: 4 iron, 4 sulfur cluster binding9.55E-03
48GO:0005484: SNAP receptor activity1.04E-02
49GO:0005198: structural molecule activity1.13E-02
50GO:0016887: ATPase activity1.14E-02
51GO:0051287: NAD binding1.19E-02
52GO:0031625: ubiquitin protein ligase binding1.38E-02
53GO:0016874: ligase activity1.58E-02
54GO:0003779: actin binding1.61E-02
55GO:0015035: protein disulfide oxidoreductase activity1.68E-02
56GO:0005507: copper ion binding1.87E-02
57GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.12E-02
58GO:0015297: antiporter activity2.35E-02
59GO:0008194: UDP-glycosyltransferase activity2.63E-02
60GO:0003743: translation initiation factor activity2.72E-02
61GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.88E-02
62GO:0004601: peroxidase activity3.32E-02
63GO:0004674: protein serine/threonine kinase activity3.77E-02
64GO:0008233: peptidase activity3.82E-02
65GO:0004672: protein kinase activity3.90E-02
66GO:0042803: protein homodimerization activity4.55E-02
67GO:0004722: protein serine/threonine phosphatase activity4.69E-02
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Gene type



Gene DE type