co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
2	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
3	GO:0034756: regulation of iron ion transport	0.00E+00
4	GO:0006672: ceramide metabolic process	6.50E-06
5	GO:0006874: cellular calcium ion homeostasis	1.05E-05
6	GO:0055074: calcium ion homeostasis	2.27E-05
7	GO:0006511: ubiquitin-dependent protein catabolic process	1.08E-04
8	GO:0003006: developmental process involved in reproduction	1.97E-04
9	GO:0071369: cellular response to ethylene stimulus	3.05E-04
10	GO:0035266: meristem growth	3.81E-04
11	GO:0007292: female gamete generation	3.81E-04
12	GO:0097502: mannosylation	3.81E-04
13	GO:0009623: response to parasitic fungus	3.81E-04
14	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.81E-04
15	GO:0006680: glucosylceramide catabolic process	3.81E-04
16	GO:0007186: G-protein coupled receptor signaling pathway	5.27E-04
17	GO:0006623: protein targeting to vacuole	5.60E-04
18	GO:0048209: regulation of vesicle targeting, to, from or within Golgi	8.27E-04
19	GO:0051252: regulation of RNA metabolic process	8.27E-04
20	GO:0043132: NAD transport	8.27E-04
21	GO:0009156: ribonucleoside monophosphate biosynthetic process	8.27E-04
22	GO:0080183: response to photooxidative stress	8.27E-04
23	GO:0046939: nucleotide phosphorylation	8.27E-04
24	GO:0048569: post-embryonic animal organ development	8.27E-04
25	GO:0050684: regulation of mRNA processing	8.27E-04
26	GO:0015865: purine nucleotide transport	8.27E-04
27	GO:0051788: response to misfolded protein	8.27E-04
28	GO:0018345: protein palmitoylation	8.27E-04
29	GO:0008535: respiratory chain complex IV assembly	8.27E-04
30	GO:0044375: regulation of peroxisome size	1.34E-03
31	GO:0045836: positive regulation of meiotic nuclear division	1.34E-03
32	GO:0006517: protein deglycosylation	1.34E-03
33	GO:0018342: protein prenylation	1.34E-03
34	GO:0060968: regulation of gene silencing	1.34E-03
35	GO:0071367: cellular response to brassinosteroid stimulus	1.34E-03
36	GO:0032784: regulation of DNA-templated transcription, elongation	1.34E-03
37	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.34E-03
38	GO:0017006: protein-tetrapyrrole linkage	1.34E-03
39	GO:0006499: N-terminal protein myristoylation	1.53E-03
40	GO:0009225: nucleotide-sugar metabolic process	1.63E-03
41	GO:0010039: response to iron ion	1.63E-03
42	GO:0032877: positive regulation of DNA endoreduplication	1.93E-03
43	GO:0000187: activation of MAPK activity	1.93E-03
44	GO:0009584: detection of visible light	1.93E-03
45	GO:0046902: regulation of mitochondrial membrane permeability	1.93E-03
46	GO:0072334: UDP-galactose transmembrane transport	1.93E-03
47	GO:0010104: regulation of ethylene-activated signaling pathway	1.93E-03
48	GO:0048577: negative regulation of short-day photoperiodism, flowering	1.93E-03
49	GO:0010731: protein glutathionylation	1.93E-03
50	GO:0015858: nucleoside transport	1.93E-03
51	GO:0045454: cell redox homeostasis	2.25E-03
52	GO:0009165: nucleotide biosynthetic process	2.60E-03
53	GO:0045227: capsule polysaccharide biosynthetic process	2.60E-03
54	GO:0033320: UDP-D-xylose biosynthetic process	2.60E-03
55	GO:0006536: glutamate metabolic process	2.60E-03
56	GO:0033358: UDP-L-arabinose biosynthetic process	2.60E-03
57	GO:0000919: cell plate assembly	2.60E-03
58	GO:0009814: defense response, incompatible interaction	2.67E-03
59	GO:0030433: ubiquitin-dependent ERAD pathway	2.67E-03
60	GO:0010227: floral organ abscission	2.92E-03
61	GO:0006012: galactose metabolic process	2.92E-03
62	GO:0097428: protein maturation by iron-sulfur cluster transfer	3.32E-03
63	GO:0045927: positive regulation of growth	3.32E-03
64	GO:0046283: anthocyanin-containing compound metabolic process	3.32E-03
65	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.11E-03
66	GO:0048827: phyllome development	4.11E-03
67	GO:0048232: male gamete generation	4.11E-03
68	GO:0043248: proteasome assembly	4.11E-03
69	GO:0042732: D-xylose metabolic process	4.11E-03
70	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	4.11E-03
71	GO:0060918: auxin transport	4.11E-03
72	GO:0042176: regulation of protein catabolic process	4.11E-03
73	GO:0048579: negative regulation of long-day photoperiodism, flowering	4.11E-03
74	GO:0055085: transmembrane transport	4.19E-03
75	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.95E-03
76	GO:0048280: vesicle fusion with Golgi apparatus	4.95E-03
77	GO:0006891: intra-Golgi vesicle-mediated transport	4.95E-03
78	GO:0080027: response to herbivore	5.85E-03
79	GO:0048528: post-embryonic root development	5.85E-03
80	GO:0007050: cell cycle arrest	5.85E-03
81	GO:0015937: coenzyme A biosynthetic process	5.85E-03
82	GO:0006468: protein phosphorylation	6.59E-03
83	GO:0016579: protein deubiquitination	6.76E-03
84	GO:2000070: regulation of response to water deprivation	6.80E-03
85	GO:0009819: drought recovery	6.80E-03
86	GO:0006491: N-glycan processing	6.80E-03
87	GO:0010078: maintenance of root meristem identity	6.80E-03
88	GO:0001558: regulation of cell growth	7.80E-03
89	GO:0009657: plastid organization	7.80E-03
90	GO:0010204: defense response signaling pathway, resistance gene-independent	7.80E-03
91	GO:0006888: ER to Golgi vesicle-mediated transport	8.44E-03
92	GO:0015780: nucleotide-sugar transport	8.86E-03
93	GO:0009416: response to light stimulus	8.88E-03
94	GO:0046686: response to cadmium ion	9.12E-03
95	GO:0043067: regulation of programmed cell death	9.96E-03
96	GO:0048268: clathrin coat assembly	9.96E-03
97	GO:0009407: toxin catabolic process	1.03E-02
98	GO:0043069: negative regulation of programmed cell death	1.11E-02
99	GO:0048829: root cap development	1.11E-02
100	GO:0006896: Golgi to vacuole transport	1.11E-02
101	GO:0010015: root morphogenesis	1.23E-02
102	GO:0072593: reactive oxygen species metabolic process	1.23E-02
103	GO:0043085: positive regulation of catalytic activity	1.23E-02
104	GO:0006790: sulfur compound metabolic process	1.36E-02
105	GO:0007166: cell surface receptor signaling pathway	1.38E-02
106	GO:0055046: microgametogenesis	1.48E-02
107	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.48E-02
108	GO:0006626: protein targeting to mitochondrion	1.48E-02
109	GO:0010102: lateral root morphogenesis	1.48E-02
110	GO:0010540: basipetal auxin transport	1.62E-02
111	GO:0009266: response to temperature stimulus	1.62E-02
112	GO:0006541: glutamine metabolic process	1.62E-02
113	GO:0009933: meristem structural organization	1.62E-02
114	GO:0009636: response to toxic substance	1.73E-02
115	GO:0090351: seedling development	1.75E-02
116	GO:0070588: calcium ion transmembrane transport	1.75E-02
117	GO:0046854: phosphatidylinositol phosphorylation	1.75E-02
118	GO:0042343: indole glucosinolate metabolic process	1.75E-02
119	GO:0071732: cellular response to nitric oxide	1.75E-02
120	GO:0000165: MAPK cascade	1.86E-02
121	GO:0006487: protein N-linked glycosylation	2.04E-02
122	GO:0009116: nucleoside metabolic process	2.04E-02
123	GO:0051603: proteolysis involved in cellular protein catabolic process	2.15E-02
124	GO:0051302: regulation of cell division	2.19E-02
125	GO:0016998: cell wall macromolecule catabolic process	2.34E-02
126	GO:0098542: defense response to other organism	2.34E-02
127	GO:0051321: meiotic cell cycle	2.34E-02
128	GO:0016310: phosphorylation	2.37E-02
129	GO:0080092: regulation of pollen tube growth	2.50E-02
130	GO:0071456: cellular response to hypoxia	2.50E-02
131	GO:0010017: red or far-red light signaling pathway	2.50E-02
132	GO:0071215: cellular response to abscisic acid stimulus	2.65E-02
133	GO:0046777: protein autophosphorylation	2.90E-02
134	GO:0009624: response to nematode	2.96E-02
135	GO:0044550: secondary metabolite biosynthetic process	2.96E-02
136	GO:0042742: defense response to bacterium	2.97E-02
137	GO:0016117: carotenoid biosynthetic process	2.98E-02
138	GO:0042147: retrograde transport, endosome to Golgi	2.98E-02
139	GO:0008284: positive regulation of cell proliferation	2.98E-02
140	GO:0010051: xylem and phloem pattern formation	3.15E-02
141	GO:0010118: stomatal movement	3.15E-02
142	GO:0006662: glycerol ether metabolic process	3.33E-02
143	GO:0006885: regulation of pH	3.33E-02
144	GO:0048544: recognition of pollen	3.50E-02
145	GO:0055072: iron ion homeostasis	3.68E-02
146	GO:0010183: pollen tube guidance	3.68E-02
147	GO:0009058: biosynthetic process	3.90E-02
148	GO:0009630: gravitropism	4.05E-02
149	GO:0019761: glucosinolate biosynthetic process	4.05E-02
150	GO:0007165: signal transduction	4.15E-02
151	GO:0030163: protein catabolic process	4.24E-02
152	GO:0071281: cellular response to iron ion	4.24E-02
153	GO:0015031: protein transport	4.40E-02
154	GO:0006914: autophagy	4.43E-02
155	GO:0006904: vesicle docking involved in exocytosis	4.62E-02
156	GO:0051607: defense response to virus	4.82E-02
157	GO:0000910: cytokinesis	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0001729: ceramide kinase activity	0.00E+00
2	GO:0051670: inulinase activity	0.00E+00
3	GO:0052925: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity	0.00E+00
4	GO:0000033: alpha-1,3-mannosyltransferase activity	0.00E+00
5	GO:0008418: protein-N-terminal asparagine amidohydrolase activity	0.00E+00
6	GO:0044610: FMN transmembrane transporter activity	0.00E+00
7	GO:0004970: ionotropic glutamate receptor activity	5.21E-06
8	GO:0005217: intracellular ligand-gated ion channel activity	5.21E-06
9	GO:0009916: alternative oxidase activity	8.79E-05
10	GO:0016301: kinase activity	2.20E-04
11	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	3.81E-04
12	GO:0051669: fructan beta-fructosidase activity	3.81E-04
13	GO:0048037: cofactor binding	3.81E-04
14	GO:0000386: second spliceosomal transesterification activity	3.81E-04
15	GO:0004348: glucosylceramidase activity	3.81E-04
16	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	3.81E-04
17	GO:0015230: FAD transmembrane transporter activity	3.81E-04
18	GO:0052917: dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity	3.81E-04
19	GO:0031219: levanase activity	3.81E-04
20	GO:0008517: folic acid transporter activity	8.27E-04
21	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	8.27E-04
22	GO:0004776: succinate-CoA ligase (GDP-forming) activity	8.27E-04
23	GO:0004566: beta-glucuronidase activity	8.27E-04
24	GO:0015228: coenzyme A transmembrane transporter activity	8.27E-04
25	GO:0009883: red or far-red light photoreceptor activity	8.27E-04
26	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	8.27E-04
27	GO:0051724: NAD transporter activity	8.27E-04
28	GO:0008428: ribonuclease inhibitor activity	8.27E-04
29	GO:1990585: hydroxyproline O-arabinosyltransferase activity	8.27E-04
30	GO:0004775: succinate-CoA ligase (ADP-forming) activity	8.27E-04
31	GO:0051980: iron-nicotianamine transmembrane transporter activity	8.27E-04
32	GO:0008559: xenobiotic-transporting ATPase activity	9.99E-04
33	GO:0030247: polysaccharide binding	1.19E-03
34	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.34E-03
35	GO:0008020: G-protein coupled photoreceptor activity	1.34E-03
36	GO:0005096: GTPase activator activity	1.44E-03
37	GO:0004867: serine-type endopeptidase inhibitor activity	1.63E-03
38	GO:0005524: ATP binding	1.70E-03
39	GO:0004351: glutamate decarboxylase activity	1.93E-03
40	GO:0004749: ribose phosphate diphosphokinase activity	1.93E-03
41	GO:0019201: nucleotide kinase activity	1.93E-03
42	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.93E-03
43	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.93E-03
44	GO:0004298: threonine-type endopeptidase activity	2.44E-03
45	GO:0050373: UDP-arabinose 4-epimerase activity	2.60E-03
46	GO:0046527: glucosyltransferase activity	2.60E-03
47	GO:0004576: oligosaccharyl transferase activity	2.60E-03
48	GO:0004930: G-protein coupled receptor activity	2.60E-03
49	GO:0016004: phospholipase activator activity	2.60E-03
50	GO:0005509: calcium ion binding	2.94E-03
51	GO:0003727: single-stranded RNA binding	3.17E-03
52	GO:0005471: ATP:ADP antiporter activity	3.32E-03
53	GO:0005459: UDP-galactose transmembrane transporter activity	3.32E-03
54	GO:0008948: oxaloacetate decarboxylase activity	3.32E-03
55	GO:0080122: AMP transmembrane transporter activity	3.32E-03
56	GO:0004040: amidase activity	3.32E-03
57	GO:0047134: protein-disulfide reductase activity	3.44E-03
58	GO:0036402: proteasome-activating ATPase activity	4.11E-03
59	GO:0048040: UDP-glucuronate decarboxylase activity	4.11E-03
60	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	4.11E-03
61	GO:0004791: thioredoxin-disulfide reductase activity	4.31E-03
62	GO:0051020: GTPase binding	4.95E-03
63	GO:0015217: ADP transmembrane transporter activity	4.95E-03
64	GO:0070403: NAD+ binding	4.95E-03
65	GO:0004843: thiol-dependent ubiquitin-specific protease activity	4.95E-03
66	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.95E-03
67	GO:0004017: adenylate kinase activity	4.95E-03
68	GO:0005347: ATP transmembrane transporter activity	4.95E-03
69	GO:0003978: UDP-glucose 4-epimerase activity	4.95E-03
70	GO:0005338: nucleotide-sugar transmembrane transporter activity	5.85E-03
71	GO:0009881: photoreceptor activity	5.85E-03
72	GO:0015035: protein disulfide oxidoreductase activity	6.03E-03
73	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	6.37E-03
74	GO:0004497: monooxygenase activity	6.76E-03
75	GO:0004708: MAP kinase kinase activity	6.80E-03
76	GO:0004714: transmembrane receptor protein tyrosine kinase activity	6.80E-03
77	GO:0004034: aldose 1-epimerase activity	6.80E-03
78	GO:0004525: ribonuclease III activity	6.80E-03
79	GO:0004630: phospholipase D activity	7.80E-03
80	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	7.80E-03
81	GO:0003951: NAD+ kinase activity	7.80E-03
82	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	8.00E-03
83	GO:0004683: calmodulin-dependent protein kinase activity	8.44E-03
84	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	8.86E-03
85	GO:0031490: chromatin DNA binding	9.96E-03
86	GO:0030234: enzyme regulator activity	1.11E-02
87	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	1.11E-02
88	GO:0005545: 1-phosphatidylinositol binding	1.11E-02
89	GO:0008047: enzyme activator activity	1.11E-02
90	GO:0008327: methyl-CpG binding	1.23E-02
91	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.23E-02
92	GO:0008794: arsenate reductase (glutaredoxin) activity	1.23E-02
93	GO:0003824: catalytic activity	1.25E-02
94	GO:0000149: SNARE binding	1.30E-02
95	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.36E-02
96	GO:0015198: oligopeptide transporter activity	1.36E-02
97	GO:0000155: phosphorelay sensor kinase activity	1.48E-02
98	GO:0004364: glutathione transferase activity	1.48E-02
99	GO:0005388: calcium-transporting ATPase activity	1.48E-02
100	GO:0004565: beta-galactosidase activity	1.48E-02
101	GO:0004022: alcohol dehydrogenase (NAD) activity	1.48E-02
102	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.48E-02
103	GO:0005484: SNAP receptor activity	1.54E-02
104	GO:0031624: ubiquitin conjugating enzyme binding	1.62E-02
105	GO:0035091: phosphatidylinositol binding	1.66E-02
106	GO:0017025: TBP-class protein binding	1.75E-02
107	GO:0008061: chitin binding	1.75E-02
108	GO:0005516: calmodulin binding	1.80E-02
109	GO:0005525: GTP binding	2.09E-02
110	GO:0031625: ubiquitin protein ligase binding	2.30E-02
111	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.34E-02
112	GO:0004540: ribonuclease activity	2.34E-02
113	GO:0008233: peptidase activity	2.61E-02
114	GO:0008810: cellulase activity	2.65E-02
115	GO:0022857: transmembrane transporter activity	2.79E-02
116	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.82E-02
117	GO:0051082: unfolded protein binding	2.96E-02
118	GO:0005451: monovalent cation:proton antiporter activity	3.15E-02
119	GO:0030276: clathrin binding	3.33E-02
120	GO:0001085: RNA polymerase II transcription factor binding	3.33E-02
121	GO:0016853: isomerase activity	3.50E-02
122	GO:0015299: solute:proton antiporter activity	3.50E-02
123	GO:0010181: FMN binding	3.50E-02
124	GO:0046872: metal ion binding	3.63E-02
125	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.66E-02
126	GO:0004872: receptor activity	3.68E-02
127	GO:0016740: transferase activity	3.84E-02
128	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.21E-02
129	GO:0015385: sodium:proton antiporter activity	4.24E-02
130	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.24E-02
131	GO:0030246: carbohydrate binding	4.42E-02
132	GO:0004674: protein serine/threonine kinase activity	4.49E-02
133	GO:0009055: electron carrier activity	4.69E-02
134	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.74E-02
135	GO:0019825: oxygen binding	4.79E-02
136	GO:0015297: antiporter activity	4.85E-02