GO Enrichment Analysis of Co-expressed Genes with
AT4G01690
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 3 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 4 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 5 | GO:0017038: protein import | 0.00E+00 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 6.02E-11 |
| 7 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.02E-07 |
| 8 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.27E-06 |
| 9 | GO:0006783: heme biosynthetic process | 3.12E-05 |
| 10 | GO:0009090: homoserine biosynthetic process | 5.03E-05 |
| 11 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 5.03E-05 |
| 12 | GO:0043489: RNA stabilization | 5.03E-05 |
| 13 | GO:0065002: intracellular protein transmembrane transport | 5.03E-05 |
| 14 | GO:0043953: protein transport by the Tat complex | 5.03E-05 |
| 15 | GO:0018026: peptidyl-lysine monomethylation | 1.23E-04 |
| 16 | GO:0006435: threonyl-tRNA aminoacylation | 1.23E-04 |
| 17 | GO:0007017: microtubule-based process | 1.39E-04 |
| 18 | GO:0034051: negative regulation of plant-type hypersensitive response | 2.11E-04 |
| 19 | GO:0005977: glycogen metabolic process | 2.11E-04 |
| 20 | GO:0000913: preprophase band assembly | 2.11E-04 |
| 21 | GO:0031022: nuclear migration along microfilament | 2.11E-04 |
| 22 | GO:0009067: aspartate family amino acid biosynthetic process | 3.09E-04 |
| 23 | GO:0010371: regulation of gibberellin biosynthetic process | 3.09E-04 |
| 24 | GO:0006020: inositol metabolic process | 3.09E-04 |
| 25 | GO:1901000: regulation of response to salt stress | 3.09E-04 |
| 26 | GO:0009735: response to cytokinin | 3.49E-04 |
| 27 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.55E-04 |
| 28 | GO:0006021: inositol biosynthetic process | 4.15E-04 |
| 29 | GO:0010021: amylopectin biosynthetic process | 4.15E-04 |
| 30 | GO:0010109: regulation of photosynthesis | 4.15E-04 |
| 31 | GO:0010027: thylakoid membrane organization | 4.65E-04 |
| 32 | GO:0006564: L-serine biosynthetic process | 5.26E-04 |
| 33 | GO:0009904: chloroplast accumulation movement | 5.26E-04 |
| 34 | GO:0000470: maturation of LSU-rRNA | 6.44E-04 |
| 35 | GO:0046855: inositol phosphate dephosphorylation | 6.44E-04 |
| 36 | GO:0009903: chloroplast avoidance movement | 7.68E-04 |
| 37 | GO:0030488: tRNA methylation | 7.68E-04 |
| 38 | GO:0009854: oxidative photosynthetic carbon pathway | 7.68E-04 |
| 39 | GO:0009088: threonine biosynthetic process | 7.68E-04 |
| 40 | GO:1901259: chloroplast rRNA processing | 7.68E-04 |
| 41 | GO:0006605: protein targeting | 1.03E-03 |
| 42 | GO:2000070: regulation of response to water deprivation | 1.03E-03 |
| 43 | GO:0006397: mRNA processing | 1.30E-03 |
| 44 | GO:0010206: photosystem II repair | 1.32E-03 |
| 45 | GO:0005982: starch metabolic process | 1.47E-03 |
| 46 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.47E-03 |
| 47 | GO:0009086: methionine biosynthetic process | 1.47E-03 |
| 48 | GO:0031425: chloroplast RNA processing | 1.47E-03 |
| 49 | GO:0008285: negative regulation of cell proliferation | 1.79E-03 |
| 50 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.79E-03 |
| 51 | GO:0006396: RNA processing | 1.85E-03 |
| 52 | GO:0006790: sulfur compound metabolic process | 1.96E-03 |
| 53 | GO:0010207: photosystem II assembly | 2.32E-03 |
| 54 | GO:0046854: phosphatidylinositol phosphorylation | 2.50E-03 |
| 55 | GO:0006633: fatty acid biosynthetic process | 2.80E-03 |
| 56 | GO:0006289: nucleotide-excision repair | 2.88E-03 |
| 57 | GO:0010073: meristem maintenance | 3.08E-03 |
| 58 | GO:0008299: isoprenoid biosynthetic process | 3.08E-03 |
| 59 | GO:0016114: terpenoid biosynthetic process | 3.29E-03 |
| 60 | GO:0010431: seed maturation | 3.29E-03 |
| 61 | GO:0035428: hexose transmembrane transport | 3.50E-03 |
| 62 | GO:0016226: iron-sulfur cluster assembly | 3.50E-03 |
| 63 | GO:0010227: floral organ abscission | 3.71E-03 |
| 64 | GO:0006412: translation | 3.80E-03 |
| 65 | GO:0055114: oxidation-reduction process | 4.12E-03 |
| 66 | GO:0051028: mRNA transport | 4.15E-03 |
| 67 | GO:0046323: glucose import | 4.60E-03 |
| 68 | GO:0009741: response to brassinosteroid | 4.60E-03 |
| 69 | GO:0009658: chloroplast organization | 4.73E-03 |
| 70 | GO:0007018: microtubule-based movement | 4.83E-03 |
| 71 | GO:0009646: response to absence of light | 4.83E-03 |
| 72 | GO:0019252: starch biosynthetic process | 5.07E-03 |
| 73 | GO:0016032: viral process | 5.56E-03 |
| 74 | GO:0030163: protein catabolic process | 5.81E-03 |
| 75 | GO:0010090: trichome morphogenesis | 5.81E-03 |
| 76 | GO:0009567: double fertilization forming a zygote and endosperm | 6.07E-03 |
| 77 | GO:0000910: cytokinesis | 6.59E-03 |
| 78 | GO:0015979: photosynthesis | 6.68E-03 |
| 79 | GO:0009813: flavonoid biosynthetic process | 8.53E-03 |
| 80 | GO:0009631: cold acclimation | 9.12E-03 |
| 81 | GO:0045087: innate immune response | 9.73E-03 |
| 82 | GO:0009853: photorespiration | 9.73E-03 |
| 83 | GO:0046686: response to cadmium ion | 1.09E-02 |
| 84 | GO:0006631: fatty acid metabolic process | 1.10E-02 |
| 85 | GO:0009640: photomorphogenesis | 1.16E-02 |
| 86 | GO:0006096: glycolytic process | 1.62E-02 |
| 87 | GO:0016310: phosphorylation | 1.93E-02 |
| 88 | GO:0009451: RNA modification | 2.76E-02 |
| 89 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.95E-02 |
| 90 | GO:0008380: RNA splicing | 3.08E-02 |
| 91 | GO:0042254: ribosome biogenesis | 3.76E-02 |
| 92 | GO:0015031: protein transport | 3.95E-02 |
| 93 | GO:0009409: response to cold | 4.21E-02 |
| 94 | GO:0005975: carbohydrate metabolic process | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 3 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 4 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 5 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 6 | GO:0004853: uroporphyrinogen decarboxylase activity | 0.00E+00 |
| 7 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 8 | GO:0019843: rRNA binding | 1.17E-05 |
| 9 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 5.03E-05 |
| 10 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 5.03E-05 |
| 11 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 5.03E-05 |
| 12 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 5.03E-05 |
| 13 | GO:0008266: poly(U) RNA binding | 8.62E-05 |
| 14 | GO:0004829: threonine-tRNA ligase activity | 1.23E-04 |
| 15 | GO:0019156: isoamylase activity | 1.23E-04 |
| 16 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.23E-04 |
| 17 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.23E-04 |
| 18 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.23E-04 |
| 19 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.23E-04 |
| 20 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.23E-04 |
| 21 | GO:0004412: homoserine dehydrogenase activity | 1.23E-04 |
| 22 | GO:0016630: protochlorophyllide reductase activity | 1.23E-04 |
| 23 | GO:0070402: NADPH binding | 2.11E-04 |
| 24 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 2.11E-04 |
| 25 | GO:0005504: fatty acid binding | 2.11E-04 |
| 26 | GO:0004072: aspartate kinase activity | 3.09E-04 |
| 27 | GO:0016851: magnesium chelatase activity | 3.09E-04 |
| 28 | GO:0005200: structural constituent of cytoskeleton | 4.15E-04 |
| 29 | GO:0016279: protein-lysine N-methyltransferase activity | 4.15E-04 |
| 30 | GO:0070628: proteasome binding | 4.15E-04 |
| 31 | GO:0045430: chalcone isomerase activity | 4.15E-04 |
| 32 | GO:0016597: amino acid binding | 4.40E-04 |
| 33 | GO:0003959: NADPH dehydrogenase activity | 5.26E-04 |
| 34 | GO:0003723: RNA binding | 5.93E-04 |
| 35 | GO:0004556: alpha-amylase activity | 6.44E-04 |
| 36 | GO:2001070: starch binding | 6.44E-04 |
| 37 | GO:0031593: polyubiquitin binding | 6.44E-04 |
| 38 | GO:0003735: structural constituent of ribosome | 7.08E-04 |
| 39 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 7.68E-04 |
| 40 | GO:0005525: GTP binding | 8.56E-04 |
| 41 | GO:0008173: RNA methyltransferase activity | 1.17E-03 |
| 42 | GO:0030955: potassium ion binding | 1.47E-03 |
| 43 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.47E-03 |
| 44 | GO:0004743: pyruvate kinase activity | 1.47E-03 |
| 45 | GO:0016491: oxidoreductase activity | 1.76E-03 |
| 46 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.32E-03 |
| 47 | GO:0051536: iron-sulfur cluster binding | 2.88E-03 |
| 48 | GO:0043130: ubiquitin binding | 2.88E-03 |
| 49 | GO:0005528: FK506 binding | 2.88E-03 |
| 50 | GO:0016853: isomerase activity | 4.83E-03 |
| 51 | GO:0005355: glucose transmembrane transporter activity | 4.83E-03 |
| 52 | GO:0003684: damaged DNA binding | 6.07E-03 |
| 53 | GO:0008483: transaminase activity | 6.33E-03 |
| 54 | GO:0008236: serine-type peptidase activity | 7.96E-03 |
| 55 | GO:0003924: GTPase activity | 8.64E-03 |
| 56 | GO:0030145: manganese ion binding | 9.12E-03 |
| 57 | GO:0003729: mRNA binding | 1.02E-02 |
| 58 | GO:0050661: NADP binding | 1.07E-02 |
| 59 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.30E-02 |
| 60 | GO:0051287: NAD binding | 1.33E-02 |
| 61 | GO:0016887: ATPase activity | 1.34E-02 |
| 62 | GO:0003777: microtubule motor activity | 1.54E-02 |
| 63 | GO:0005507: copper ion binding | 2.19E-02 |
| 64 | GO:0030170: pyridoxal phosphate binding | 2.33E-02 |
| 65 | GO:0004252: serine-type endopeptidase activity | 2.33E-02 |
| 66 | GO:0015144: carbohydrate transmembrane transporter activity | 2.46E-02 |
| 67 | GO:0005351: sugar:proton symporter activity | 2.67E-02 |
| 68 | GO:0008017: microtubule binding | 2.81E-02 |
| 69 | GO:0000287: magnesium ion binding | 3.66E-02 |
| 70 | GO:0005524: ATP binding | 4.05E-02 |