Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002764: immune response-regulating signaling pathway0.00E+00
2GO:0006983: ER overload response0.00E+00
3GO:1902009: positive regulation of toxin transport0.00E+00
4GO:0010324: membrane invagination0.00E+00
5GO:0071327: cellular response to trehalose stimulus0.00E+00
6GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
7GO:0010647: positive regulation of cell communication0.00E+00
8GO:1902001: fatty acid transmembrane transport0.00E+00
9GO:1902289: negative regulation of defense response to oomycetes0.00E+00
10GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
11GO:0010273: detoxification of copper ion0.00E+00
12GO:1900367: positive regulation of defense response to insect0.00E+00
13GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
14GO:0010200: response to chitin1.04E-07
15GO:0009617: response to bacterium1.11E-05
16GO:0006468: protein phosphorylation2.26E-05
17GO:0031348: negative regulation of defense response4.52E-05
18GO:0015696: ammonium transport9.21E-05
19GO:0080142: regulation of salicylic acid biosynthetic process1.59E-04
20GO:0060548: negative regulation of cell death1.59E-04
21GO:0072488: ammonium transmembrane transport1.59E-04
22GO:0006979: response to oxidative stress1.64E-04
23GO:0010225: response to UV-C2.42E-04
24GO:0010150: leaf senescence2.96E-04
25GO:0009816: defense response to bacterium, incompatible interaction3.02E-04
26GO:0007166: cell surface receptor signaling pathway3.94E-04
27GO:0042742: defense response to bacterium5.15E-04
28GO:0006643: membrane lipid metabolic process5.43E-04
29GO:1903648: positive regulation of chlorophyll catabolic process5.43E-04
30GO:0048508: embryonic meristem development5.43E-04
31GO:0042350: GDP-L-fucose biosynthetic process5.43E-04
32GO:0019567: arabinose biosynthetic process5.43E-04
33GO:1901430: positive regulation of syringal lignin biosynthetic process5.43E-04
34GO:0015969: guanosine tetraphosphate metabolic process5.43E-04
35GO:0010482: regulation of epidermal cell division5.43E-04
36GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.43E-04
37GO:0009609: response to symbiotic bacterium5.43E-04
38GO:0010421: hydrogen peroxide-mediated programmed cell death5.43E-04
39GO:1901183: positive regulation of camalexin biosynthetic process5.43E-04
40GO:0033306: phytol metabolic process5.43E-04
41GO:1900056: negative regulation of leaf senescence5.81E-04
42GO:1900057: positive regulation of leaf senescence5.81E-04
43GO:0009751: response to salicylic acid6.69E-04
44GO:0010112: regulation of systemic acquired resistance1.05E-03
45GO:0015908: fatty acid transport1.17E-03
46GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine1.17E-03
47GO:0019725: cellular homeostasis1.17E-03
48GO:0044419: interspecies interaction between organisms1.17E-03
49GO:0031349: positive regulation of defense response1.17E-03
50GO:0009945: radial axis specification1.17E-03
51GO:0015012: heparan sulfate proteoglycan biosynthetic process1.17E-03
52GO:0071668: plant-type cell wall assembly1.17E-03
53GO:0051258: protein polymerization1.17E-03
54GO:0060919: auxin influx1.17E-03
55GO:0034243: regulation of transcription elongation from RNA polymerase II promoter1.17E-03
56GO:0002221: pattern recognition receptor signaling pathway1.17E-03
57GO:0006597: spermine biosynthetic process1.17E-03
58GO:0015914: phospholipid transport1.17E-03
59GO:0010155: regulation of proton transport1.17E-03
60GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.17E-03
61GO:0009838: abscission1.17E-03
62GO:0080185: effector dependent induction by symbiont of host immune response1.17E-03
63GO:0010618: aerenchyma formation1.17E-03
64GO:0080181: lateral root branching1.17E-03
65GO:0006024: glycosaminoglycan biosynthetic process1.17E-03
66GO:0055088: lipid homeostasis1.17E-03
67GO:0000719: photoreactive repair1.17E-03
68GO:0043066: negative regulation of apoptotic process1.17E-03
69GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.24E-03
70GO:1900426: positive regulation of defense response to bacterium1.24E-03
71GO:0006032: chitin catabolic process1.45E-03
72GO:0009737: response to abscisic acid1.68E-03
73GO:0006886: intracellular protein transport1.71E-03
74GO:0001666: response to hypoxia1.90E-03
75GO:0016045: detection of bacterium1.92E-03
76GO:1900140: regulation of seedling development1.92E-03
77GO:0010359: regulation of anion channel activity1.92E-03
78GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.92E-03
79GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.92E-03
80GO:0002230: positive regulation of defense response to virus by host1.92E-03
81GO:0044375: regulation of peroxisome size1.92E-03
82GO:0008361: regulation of cell size1.92E-03
83GO:0015695: organic cation transport1.92E-03
84GO:0009653: anatomical structure morphogenesis1.92E-03
85GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.92E-03
86GO:0032786: positive regulation of DNA-templated transcription, elongation1.92E-03
87GO:0009626: plant-type hypersensitive response2.04E-03
88GO:0009620: response to fungus2.14E-03
89GO:0046688: response to copper ion2.77E-03
90GO:0072583: clathrin-dependent endocytosis2.78E-03
91GO:1902290: positive regulation of defense response to oomycetes2.78E-03
92GO:0010116: positive regulation of abscisic acid biosynthetic process2.78E-03
93GO:0034219: carbohydrate transmembrane transport2.78E-03
94GO:0009226: nucleotide-sugar biosynthetic process2.78E-03
95GO:0043207: response to external biotic stimulus2.78E-03
96GO:0072334: UDP-galactose transmembrane transport2.78E-03
97GO:0015749: monosaccharide transport2.78E-03
98GO:0030100: regulation of endocytosis2.78E-03
99GO:0009407: toxin catabolic process3.03E-03
100GO:0007568: aging3.21E-03
101GO:0051567: histone H3-K9 methylation3.75E-03
102GO:0010188: response to microbial phytotoxin3.75E-03
103GO:0045227: capsule polysaccharide biosynthetic process3.75E-03
104GO:0046345: abscisic acid catabolic process3.75E-03
105GO:0010483: pollen tube reception3.75E-03
106GO:0033358: UDP-L-arabinose biosynthetic process3.75E-03
107GO:0006825: copper ion transport3.78E-03
108GO:0016998: cell wall macromolecule catabolic process4.16E-03
109GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.48E-03
110GO:0006897: endocytosis4.51E-03
111GO:0071456: cellular response to hypoxia4.56E-03
112GO:2000022: regulation of jasmonic acid mediated signaling pathway4.56E-03
113GO:0016192: vesicle-mediated transport4.61E-03
114GO:0097428: protein maturation by iron-sulfur cluster transfer4.81E-03
115GO:0009229: thiamine diphosphate biosynthetic process4.81E-03
116GO:0034052: positive regulation of plant-type hypersensitive response4.81E-03
117GO:0006012: galactose metabolic process4.97E-03
118GO:0009636: response to toxic substance5.81E-03
119GO:0006596: polyamine biosynthetic process5.96E-03
120GO:0010315: auxin efflux5.96E-03
121GO:0006574: valine catabolic process5.96E-03
122GO:0006014: D-ribose metabolic process5.96E-03
123GO:0009759: indole glucosinolate biosynthetic process5.96E-03
124GO:0009228: thiamine biosynthetic process5.96E-03
125GO:0010942: positive regulation of cell death5.96E-03
126GO:1900425: negative regulation of defense response to bacterium5.96E-03
127GO:0006662: glycerol ether metabolic process6.85E-03
128GO:0046323: glucose import6.85E-03
129GO:0006470: protein dephosphorylation6.97E-03
130GO:0009942: longitudinal axis specification7.20E-03
131GO:0048509: regulation of meristem development7.20E-03
132GO:0031930: mitochondria-nucleus signaling pathway7.20E-03
133GO:0010555: response to mannitol7.20E-03
134GO:0010310: regulation of hydrogen peroxide metabolic process7.20E-03
135GO:2000067: regulation of root morphogenesis7.20E-03
136GO:0045926: negative regulation of growth7.20E-03
137GO:0015031: protein transport7.28E-03
138GO:0009809: lignin biosynthetic process7.34E-03
139GO:0009749: response to glucose7.91E-03
140GO:0035556: intracellular signal transduction8.40E-03
141GO:0050829: defense response to Gram-negative bacterium8.52E-03
142GO:1902074: response to salt8.52E-03
143GO:0010044: response to aluminum ion8.52E-03
144GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.52E-03
145GO:0009610: response to symbiotic fungus8.52E-03
146GO:0046470: phosphatidylcholine metabolic process8.52E-03
147GO:0043090: amino acid import8.52E-03
148GO:0006096: glycolytic process9.09E-03
149GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline9.92E-03
150GO:0009819: drought recovery9.92E-03
151GO:0006605: protein targeting9.92E-03
152GO:0030162: regulation of proteolysis9.92E-03
153GO:1900150: regulation of defense response to fungus9.92E-03
154GO:0016559: peroxisome fission9.92E-03
155GO:0009787: regulation of abscisic acid-activated signaling pathway9.92E-03
156GO:0009414: response to water deprivation1.07E-02
157GO:0006904: vesicle docking involved in exocytosis1.09E-02
158GO:0010497: plasmodesmata-mediated intercellular transport1.14E-02
159GO:0010204: defense response signaling pathway, resistance gene-independent1.14E-02
160GO:2000031: regulation of salicylic acid mediated signaling pathway1.14E-02
161GO:0010208: pollen wall assembly1.14E-02
162GO:0010099: regulation of photomorphogenesis1.14E-02
163GO:0010120: camalexin biosynthetic process1.14E-02
164GO:0007186: G-protein coupled receptor signaling pathway1.14E-02
165GO:0018105: peptidyl-serine phosphorylation1.20E-02
166GO:0019432: triglyceride biosynthetic process1.30E-02
167GO:0009821: alkaloid biosynthetic process1.30E-02
168GO:0080144: amino acid homeostasis1.30E-02
169GO:0006098: pentose-phosphate shunt1.30E-02
170GO:0009627: systemic acquired resistance1.38E-02
171GO:0008202: steroid metabolic process1.46E-02
172GO:0030042: actin filament depolymerization1.46E-02
173GO:0080167: response to karrikin1.53E-02
174GO:0008219: cell death1.61E-02
175GO:0006325: chromatin organization1.63E-02
176GO:0043069: negative regulation of programmed cell death1.63E-02
177GO:0046777: protein autophosphorylation1.69E-02
178GO:0009750: response to fructose1.81E-02
179GO:0048765: root hair cell differentiation1.81E-02
180GO:0000038: very long-chain fatty acid metabolic process1.81E-02
181GO:0019684: photosynthesis, light reaction1.81E-02
182GO:0043085: positive regulation of catalytic activity1.81E-02
183GO:0002213: defense response to insect1.99E-02
184GO:0010105: negative regulation of ethylene-activated signaling pathway1.99E-02
185GO:0045037: protein import into chloroplast stroma1.99E-02
186GO:0012501: programmed cell death1.99E-02
187GO:0045892: negative regulation of transcription, DNA-templated2.05E-02
188GO:0034599: cellular response to oxidative stress2.14E-02
189GO:0006006: glucose metabolic process2.18E-02
190GO:0055046: microgametogenesis2.18E-02
191GO:2000012: regulation of auxin polar transport2.18E-02
192GO:0007165: signal transduction2.26E-02
193GO:0009611: response to wounding2.33E-02
194GO:0002237: response to molecule of bacterial origin2.37E-02
195GO:0010540: basipetal auxin transport2.37E-02
196GO:0009266: response to temperature stimulus2.37E-02
197GO:0007034: vacuolar transport2.37E-02
198GO:0006952: defense response2.53E-02
199GO:0010167: response to nitrate2.58E-02
200GO:0070588: calcium ion transmembrane transport2.58E-02
201GO:0010053: root epidermal cell differentiation2.58E-02
202GO:0009225: nucleotide-sugar metabolic process2.58E-02
203GO:0007031: peroxisome organization2.58E-02
204GO:0042343: indole glucosinolate metabolic process2.58E-02
205GO:0009744: response to sucrose2.64E-02
206GO:0051707: response to other organism2.64E-02
207GO:0009863: salicylic acid mediated signaling pathway3.00E-02
208GO:0030150: protein import into mitochondrial matrix3.00E-02
209GO:2000377: regulation of reactive oxygen species metabolic process3.00E-02
210GO:0080147: root hair cell development3.00E-02
211GO:0009753: response to jasmonic acid3.03E-02
212GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.20E-02
213GO:0010026: trichome differentiation3.22E-02
214GO:0098542: defense response to other organism3.44E-02
215GO:0010431: seed maturation3.44E-02
216GO:0006486: protein glycosylation3.56E-02
217GO:0035428: hexose transmembrane transport3.67E-02
218GO:0030245: cellulose catabolic process3.67E-02
219GO:0009411: response to UV3.90E-02
220GO:0009625: response to insect3.90E-02
221GO:0006284: base-excision repair4.14E-02
222GO:0009306: protein secretion4.14E-02
223GO:0010089: xylem development4.14E-02
224GO:0010584: pollen exine formation4.14E-02
225GO:0006970: response to osmotic stress4.36E-02
226GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.39E-02
227GO:0080022: primary root development4.63E-02
228GO:0000413: protein peptidyl-prolyl isomerization4.63E-02
229GO:0050832: defense response to fungus4.86E-02
RankGO TermAdjusted P value
1GO:0050334: thiaminase activity0.00E+00
2GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
3GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
4GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
5GO:0004168: dolichol kinase activity0.00E+00
6GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
7GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
8GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
9GO:0008320: protein transmembrane transporter activity3.51E-07
10GO:0004672: protein kinase activity1.28E-05
11GO:0004714: transmembrane receptor protein tyrosine kinase activity3.41E-05
12GO:0016301: kinase activity1.55E-04
13GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.54E-04
14GO:0008519: ammonium transmembrane transporter activity3.41E-04
15GO:0003978: UDP-glucose 4-epimerase activity4.54E-04
16GO:0033612: receptor serine/threonine kinase binding4.83E-04
17GO:0016768: spermine synthase activity5.43E-04
18GO:2001147: camalexin binding5.43E-04
19GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity5.43E-04
20GO:0015245: fatty acid transporter activity5.43E-04
21GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity5.43E-04
22GO:0050577: GDP-L-fucose synthase activity5.43E-04
23GO:0009679: hexose:proton symporter activity5.43E-04
24GO:0032050: clathrin heavy chain binding5.43E-04
25GO:2001227: quercitrin binding5.43E-04
26GO:1901149: salicylic acid binding5.43E-04
27GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity5.43E-04
28GO:0015036: disulfide oxidoreductase activity1.17E-03
29GO:0008728: GTP diphosphokinase activity1.17E-03
30GO:0004766: spermidine synthase activity1.17E-03
31GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.17E-03
32GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.17E-03
33GO:0030955: potassium ion binding1.24E-03
34GO:0004743: pyruvate kinase activity1.24E-03
35GO:0004713: protein tyrosine kinase activity1.45E-03
36GO:0004568: chitinase activity1.45E-03
37GO:0004871: signal transducer activity1.76E-03
38GO:0004674: protein serine/threonine kinase activity1.82E-03
39GO:0031683: G-protein beta/gamma-subunit complex binding1.92E-03
40GO:0001664: G-protein coupled receptor binding1.92E-03
41GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.92E-03
42GO:0016531: copper chaperone activity1.92E-03
43GO:0000975: regulatory region DNA binding1.92E-03
44GO:0005388: calcium-transporting ATPase activity2.18E-03
45GO:0008375: acetylglucosaminyltransferase activity2.19E-03
46GO:0009931: calcium-dependent protein serine/threonine kinase activity2.19E-03
47GO:0004683: calmodulin-dependent protein kinase activity2.34E-03
48GO:0004806: triglyceride lipase activity2.34E-03
49GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity2.78E-03
50GO:0005509: calcium ion binding3.42E-03
51GO:0019199: transmembrane receptor protein kinase activity3.75E-03
52GO:0000993: RNA polymerase II core binding3.75E-03
53GO:0050373: UDP-arabinose 4-epimerase activity3.75E-03
54GO:0010328: auxin influx transmembrane transporter activity3.75E-03
55GO:0004712: protein serine/threonine/tyrosine kinase activity4.05E-03
56GO:0019706: protein-cysteine S-palmitoyltransferase activity4.16E-03
57GO:0004364: glutathione transferase activity4.75E-03
58GO:0005546: phosphatidylinositol-4,5-bisphosphate binding4.81E-03
59GO:0005496: steroid binding4.81E-03
60GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.81E-03
61GO:0008725: DNA-3-methyladenine glycosylase activity4.81E-03
62GO:0010294: abscisic acid glucosyltransferase activity4.81E-03
63GO:0005459: UDP-galactose transmembrane transporter activity4.81E-03
64GO:0015145: monosaccharide transmembrane transporter activity4.81E-03
65GO:0047134: protein-disulfide reductase activity5.87E-03
66GO:0004605: phosphatidate cytidylyltransferase activity5.96E-03
67GO:0004144: diacylglycerol O-acyltransferase activity7.20E-03
68GO:0004747: ribokinase activity7.20E-03
69GO:0004656: procollagen-proline 4-dioxygenase activity7.20E-03
70GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity7.20E-03
71GO:0004791: thioredoxin-disulfide reductase activity7.37E-03
72GO:0050662: coenzyme binding7.37E-03
73GO:0005524: ATP binding7.61E-03
74GO:0043295: glutathione binding8.52E-03
75GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor9.67E-03
76GO:0008865: fructokinase activity9.92E-03
77GO:0008142: oxysterol binding1.14E-02
78GO:0004630: phospholipase D activity1.14E-02
79GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.14E-02
80GO:0015035: protein disulfide oxidoreductase activity1.20E-02
81GO:0071949: FAD binding1.30E-02
82GO:0016844: strictosidine synthase activity1.46E-02
83GO:0008171: O-methyltransferase activity1.63E-02
84GO:0008047: enzyme activator activity1.63E-02
85GO:0015020: glucuronosyltransferase activity1.63E-02
86GO:0008794: arsenate reductase (glutaredoxin) activity1.81E-02
87GO:0008559: xenobiotic-transporting ATPase activity1.81E-02
88GO:0005543: phospholipid binding1.81E-02
89GO:0005525: GTP binding1.98E-02
90GO:0015198: oligopeptide transporter activity1.99E-02
91GO:0004022: alcohol dehydrogenase (NAD) activity2.18E-02
92GO:0010329: auxin efflux transmembrane transporter activity2.18E-02
93GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.18E-02
94GO:0004722: protein serine/threonine phosphatase activity2.30E-02
95GO:0051119: sugar transmembrane transporter activity2.58E-02
96GO:0004190: aspartic-type endopeptidase activity2.58E-02
97GO:0005198: structural molecule activity2.97E-02
98GO:0051536: iron-sulfur cluster binding3.00E-02
99GO:0031418: L-ascorbic acid binding3.00E-02
100GO:0003954: NADH dehydrogenase activity3.00E-02
101GO:0051287: NAD binding3.20E-02
102GO:0043424: protein histidine kinase binding3.22E-02
103GO:0008810: cellulase activity3.90E-02
104GO:0008234: cysteine-type peptidase activity3.94E-02
105GO:0003727: single-stranded RNA binding4.14E-02
106GO:0005516: calmodulin binding4.43E-02
107GO:0043531: ADP binding4.45E-02
108GO:0080043: quercetin 3-O-glucosyltransferase activity4.61E-02
109GO:0080044: quercetin 7-O-glucosyltransferase activity4.61E-02
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Gene type



Gene DE type