co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00550

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
2	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
3	GO:0006216: cytidine catabolic process	0.00E+00
4	GO:0033198: response to ATP	0.00E+00
5	GO:0016574: histone ubiquitination	0.00E+00
6	GO:0000731: DNA synthesis involved in DNA repair	0.00E+00
7	GO:0046109: uridine biosynthetic process	0.00E+00
8	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
9	GO:2000541: positive regulation of protein geranylgeranylation	0.00E+00
10	GO:0000209: protein polyubiquitination	9.20E-05
11	GO:0034975: protein folding in endoplasmic reticulum	2.04E-04
12	GO:1902265: abscisic acid homeostasis	2.04E-04
13	GO:0090567: reproductive shoot system development	2.04E-04
14	GO:0042759: long-chain fatty acid biosynthetic process	2.04E-04
15	GO:0048268: clathrin coat assembly	3.06E-04
16	GO:0006996: organelle organization	4.57E-04
17	GO:0015783: GDP-fucose transport	7.44E-04
18	GO:0010498: proteasomal protein catabolic process	7.44E-04
19	GO:1900055: regulation of leaf senescence	7.44E-04
20	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.44E-04
21	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.02E-03
22	GO:0046513: ceramide biosynthetic process	1.06E-03
23	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.06E-03
24	GO:0010306: rhamnogalacturonan II biosynthetic process	1.06E-03
25	GO:0071456: cellular response to hypoxia	1.10E-03
26	GO:0009687: abscisic acid metabolic process	1.41E-03
27	GO:0045088: regulation of innate immune response	1.41E-03
28	GO:0048544: recognition of pollen	1.75E-03
29	GO:0018344: protein geranylgeranylation	1.80E-03
30	GO:0006623: protein targeting to vacuole	1.88E-03
31	GO:0002238: response to molecule of fungal origin	2.21E-03
32	GO:0009972: cytidine deamination	2.21E-03
33	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.66E-03
34	GO:0046470: phosphatidylcholine metabolic process	3.13E-03
35	GO:0006906: vesicle fusion	3.22E-03
36	GO:0016311: dephosphorylation	3.58E-03
37	GO:0009819: drought recovery	3.63E-03
38	GO:0030091: protein repair	3.63E-03
39	GO:0009850: auxin metabolic process	3.63E-03
40	GO:0030968: endoplasmic reticulum unfolded protein response	4.15E-03
41	GO:0006261: DNA-dependent DNA replication	4.15E-03
42	GO:0006499: N-terminal protein myristoylation	4.15E-03
43	GO:0006997: nucleus organization	4.15E-03
44	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.21E-03
45	GO:0009060: aerobic respiration	4.70E-03
46	GO:0009056: catabolic process	4.70E-03
47	GO:0015780: nucleotide-sugar transport	4.70E-03
48	GO:0006897: endocytosis	5.66E-03
49	GO:0010629: negative regulation of gene expression	5.86E-03
50	GO:0042742: defense response to bacterium	6.13E-03
51	GO:0006468: protein phosphorylation	6.44E-03
52	GO:0046856: phosphatidylinositol dephosphorylation	6.48E-03
53	GO:0009682: induced systemic resistance	6.48E-03
54	GO:0006790: sulfur compound metabolic process	7.12E-03
55	GO:0012501: programmed cell death	7.12E-03
56	GO:0006952: defense response	7.37E-03
57	GO:0046274: lignin catabolic process	7.78E-03
58	GO:0055046: microgametogenesis	7.78E-03
59	GO:0010102: lateral root morphogenesis	7.78E-03
60	GO:0010628: positive regulation of gene expression	7.78E-03
61	GO:0002237: response to molecule of bacterial origin	8.47E-03
62	GO:0046854: phosphatidylinositol phosphorylation	9.17E-03
63	GO:0010053: root epidermal cell differentiation	9.17E-03
64	GO:0042343: indole glucosinolate metabolic process	9.17E-03
65	GO:0010030: positive regulation of seed germination	9.17E-03
66	GO:0015031: protein transport	9.31E-03
67	GO:2000377: regulation of reactive oxygen species metabolic process	1.06E-02
68	GO:0006289: nucleotide-excision repair	1.06E-02
69	GO:0098542: defense response to other organism	1.22E-02
70	GO:0006334: nucleosome assembly	1.22E-02
71	GO:0048278: vesicle docking	1.22E-02
72	GO:0018105: peptidyl-serine phosphorylation	1.22E-02
73	GO:0003333: amino acid transmembrane transport	1.22E-02
74	GO:0009814: defense response, incompatible interaction	1.30E-02
75	GO:0030433: ubiquitin-dependent ERAD pathway	1.30E-02
76	GO:0009751: response to salicylic acid	1.35E-02
77	GO:0009561: megagametogenesis	1.47E-02
78	GO:0008033: tRNA processing	1.64E-02
79	GO:0000413: protein peptidyl-prolyl isomerization	1.64E-02
80	GO:0042752: regulation of circadian rhythm	1.82E-02
81	GO:0000302: response to reactive oxygen species	2.01E-02
82	GO:0007264: small GTPase mediated signal transduction	2.11E-02
83	GO:0016032: viral process	2.11E-02
84	GO:0006464: cellular protein modification process	2.30E-02
85	GO:0009738: abscisic acid-activated signaling pathway	2.71E-02
86	GO:0009816: defense response to bacterium, incompatible interaction	2.72E-02
87	GO:0006888: ER to Golgi vesicle-mediated transport	2.94E-02
88	GO:0030244: cellulose biosynthetic process	3.16E-02
89	GO:0010043: response to zinc ion	3.50E-02
90	GO:0010119: regulation of stomatal movement	3.50E-02
91	GO:0006865: amino acid transport	3.62E-02
92	GO:0000724: double-strand break repair via homologous recombination	3.62E-02
93	GO:0009867: jasmonic acid mediated signaling pathway	3.74E-02
94	GO:0006457: protein folding	3.89E-02
95	GO:0080167: response to karrikin	3.92E-02
96	GO:0046777: protein autophosphorylation	4.19E-02
97	GO:0006887: exocytosis	4.22E-02
98	GO:0006631: fatty acid metabolic process	4.22E-02
99	GO:0044550: secondary metabolite biosynthetic process	4.26E-02
100	GO:0042542: response to hydrogen peroxide	4.35E-02
101	GO:0051707: response to other organism	4.47E-02
102	GO:0055114: oxidation-reduction process	4.59E-02
103	GO:0008643: carbohydrate transport	4.73E-02
104	GO:0006886: intracellular protein transport	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0034338: short-chain carboxylesterase activity	0.00E+00
2	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
3	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
4	GO:0047844: deoxycytidine deaminase activity	0.00E+00
5	GO:0005092: GDP-dissociation inhibitor activity	0.00E+00
6	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
7	GO:0035252: UDP-xylosyltransferase activity	7.23E-05
8	GO:1990381: ubiquitin-specific protease binding	2.04E-04
9	GO:0019707: protein-cysteine S-acyltransferase activity	2.04E-04
10	GO:0005545: 1-phosphatidylinositol binding	3.60E-04
11	GO:0080045: quercetin 3'-O-glucosyltransferase activity	4.57E-04
12	GO:0050291: sphingosine N-acyltransferase activity	4.57E-04
13	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	4.57E-04
14	GO:0048531: beta-1,3-galactosyltransferase activity	4.57E-04
15	GO:0005457: GDP-fucose transmembrane transporter activity	7.44E-04
16	GO:0005093: Rab GDP-dissociation inhibitor activity	7.44E-04
17	GO:0016174: NAD(P)H oxidase activity	7.44E-04
18	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	7.44E-04
19	GO:0004751: ribose-5-phosphate isomerase activity	7.44E-04
20	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.06E-03
21	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.41E-03
22	GO:0001075: transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly	1.41E-03
23	GO:0030276: clathrin binding	1.63E-03
24	GO:0016301: kinase activity	1.75E-03
25	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.80E-03
26	GO:0010294: abscisic acid glucosyltransferase activity	1.80E-03
27	GO:0017137: Rab GTPase binding	1.80E-03
28	GO:0004623: phospholipase A2 activity	1.80E-03
29	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.66E-03
30	GO:0004126: cytidine deaminase activity	2.66E-03
31	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.66E-03
32	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.66E-03
33	GO:0004012: phospholipid-translocating ATPase activity	2.66E-03
34	GO:0003730: mRNA 3'-UTR binding	2.66E-03
35	GO:0004252: serine-type endopeptidase activity	2.77E-03
36	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.13E-03
37	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.13E-03
38	GO:0008375: acetylglucosaminyltransferase activity	3.22E-03
39	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.22E-03
40	GO:0004683: calmodulin-dependent protein kinase activity	3.40E-03
41	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.63E-03
42	GO:0004708: MAP kinase kinase activity	3.63E-03
43	GO:0004630: phospholipase D activity	4.15E-03
44	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.15E-03
45	GO:0008194: UDP-glycosyltransferase activity	4.21E-03
46	GO:0071949: FAD binding	4.70E-03
47	GO:0000149: SNARE binding	5.20E-03
48	GO:0005509: calcium ion binding	5.32E-03
49	GO:0004674: protein serine/threonine kinase activity	5.58E-03
50	GO:0005484: SNAP receptor activity	6.13E-03
51	GO:0000049: tRNA binding	7.12E-03
52	GO:0052716: hydroquinone:oxygen oxidoreductase activity	7.12E-03
53	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.78E-03
54	GO:0061630: ubiquitin protein ligase activity	8.91E-03
55	GO:0031625: ubiquitin protein ligase binding	9.16E-03
56	GO:0003887: DNA-directed DNA polymerase activity	9.90E-03
57	GO:0008134: transcription factor binding	1.06E-02
58	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.08E-02
59	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.08E-02
60	GO:0030246: carbohydrate binding	1.14E-02
61	GO:0051082: unfolded protein binding	1.18E-02
62	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.22E-02
63	GO:0035251: UDP-glucosyltransferase activity	1.22E-02
64	GO:0003756: protein disulfide isomerase activity	1.47E-02
65	GO:0005102: receptor binding	1.55E-02
66	GO:0003713: transcription coactivator activity	1.73E-02
67	GO:0010181: FMN binding	1.82E-02
68	GO:0016757: transferase activity, transferring glycosyl groups	1.87E-02
69	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.21E-02
70	GO:0016787: hydrolase activity	2.28E-02
71	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.41E-02
72	GO:0008237: metallopeptidase activity	2.41E-02
73	GO:0051213: dioxygenase activity	2.61E-02
74	GO:0004806: triglyceride lipase activity	2.94E-02
75	GO:0016491: oxidoreductase activity	3.15E-02
76	GO:0005096: GTPase activator activity	3.27E-02
77	GO:0004842: ubiquitin-protein transferase activity	3.38E-02
78	GO:0004222: metalloendopeptidase activity	3.38E-02
79	GO:0043531: ADP binding	3.47E-02
80	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.50E-02
81	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.74E-02
82	GO:0003993: acid phosphatase activity	3.86E-02
83	GO:0004497: monooxygenase activity	3.92E-02
84	GO:0042803: protein homodimerization activity	4.90E-02
85	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.99E-02