co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0097275: cellular ammonia homeostasis	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0051924: regulation of calcium ion transport	0.00E+00
4	GO:0017038: protein import	0.00E+00
5	GO:0042407: cristae formation	0.00E+00
6	GO:0046460: neutral lipid biosynthetic process	0.00E+00
7	GO:0042821: pyridoxal biosynthetic process	0.00E+00
8	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
9	GO:0031054: pre-miRNA processing	0.00E+00
10	GO:0090042: tubulin deacetylation	0.00E+00
11	GO:0090279: regulation of calcium ion import	0.00E+00
12	GO:0042820: vitamin B6 catabolic process	0.00E+00
13	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
14	GO:0008618: 7-methylguanosine metabolic process	0.00E+00
15	GO:0071474: cellular hyperosmotic response	0.00E+00
16	GO:0010157: response to chlorate	0.00E+00
17	GO:0006399: tRNA metabolic process	0.00E+00
18	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
19	GO:0070125: mitochondrial translational elongation	0.00E+00
20	GO:0036265: RNA (guanine-N7)-methylation	0.00E+00
21	GO:0009793: embryo development ending in seed dormancy	1.11E-06
22	GO:0015995: chlorophyll biosynthetic process	1.95E-06
23	GO:0009658: chloroplast organization	4.78E-05
24	GO:0045038: protein import into chloroplast thylakoid membrane	6.46E-05
25	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	9.47E-05
26	GO:0030488: tRNA methylation	1.30E-04
27	GO:0006400: tRNA modification	1.72E-04
28	GO:2000070: regulation of response to water deprivation	2.19E-04
29	GO:0000023: maltose metabolic process	2.41E-04
30	GO:0006419: alanyl-tRNA aminoacylation	2.41E-04
31	GO:0009443: pyridoxal 5'-phosphate salvage	2.41E-04
32	GO:0043266: regulation of potassium ion transport	2.41E-04
33	GO:0006659: phosphatidylserine biosynthetic process	2.41E-04
34	GO:0043686: co-translational protein modification	2.41E-04
35	GO:0043087: regulation of GTPase activity	2.41E-04
36	GO:2000021: regulation of ion homeostasis	2.41E-04
37	GO:1902458: positive regulation of stomatal opening	2.41E-04
38	GO:0071482: cellular response to light stimulus	2.70E-04
39	GO:0032544: plastid translation	2.70E-04
40	GO:0006782: protoporphyrinogen IX biosynthetic process	4.55E-04
41	GO:0045036: protein targeting to chloroplast	4.55E-04
42	GO:0006352: DNA-templated transcription, initiation	5.25E-04
43	GO:0051262: protein tetramerization	5.34E-04
44	GO:0009629: response to gravity	5.34E-04
45	GO:1900871: chloroplast mRNA modification	5.34E-04
46	GO:0006423: cysteinyl-tRNA aminoacylation	5.34E-04
47	GO:0006435: threonyl-tRNA aminoacylation	5.34E-04
48	GO:0007154: cell communication	5.34E-04
49	GO:0018026: peptidyl-lysine monomethylation	5.34E-04
50	GO:0042550: photosystem I stabilization	5.34E-04
51	GO:1903426: regulation of reactive oxygen species biosynthetic process	5.34E-04
52	GO:0045037: protein import into chloroplast stroma	6.01E-04
53	GO:0010207: photosystem II assembly	7.67E-04
54	GO:0000913: preprophase band assembly	8.68E-04
55	GO:0033591: response to L-ascorbic acid	8.68E-04
56	GO:0031022: nuclear migration along microfilament	8.68E-04
57	GO:0019419: sulfate reduction	8.68E-04
58	GO:0010589: leaf proximal/distal pattern formation	8.68E-04
59	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	8.68E-04
60	GO:0080055: low-affinity nitrate transport	8.68E-04
61	GO:0051604: protein maturation	8.68E-04
62	GO:0045493: xylan catabolic process	8.68E-04
63	GO:0009102: biotin biosynthetic process	1.24E-03
64	GO:1901000: regulation of response to salt stress	1.24E-03
65	GO:2001141: regulation of RNA biosynthetic process	1.24E-03
66	GO:0035279: mRNA cleavage involved in gene silencing by miRNA	1.65E-03
67	GO:0006021: inositol biosynthetic process	1.65E-03
68	GO:0071483: cellular response to blue light	1.65E-03
69	GO:0010109: regulation of photosynthesis	1.65E-03
70	GO:0009904: chloroplast accumulation movement	2.11E-03
71	GO:0031365: N-terminal protein amino acid modification	2.11E-03
72	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.60E-03
73	GO:0016554: cytidine to uridine editing	2.60E-03
74	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.60E-03
75	GO:0010190: cytochrome b6f complex assembly	2.60E-03
76	GO:0016032: viral process	2.71E-03
77	GO:0015979: photosynthesis	2.96E-03
78	GO:0034389: lipid particle organization	3.12E-03
79	GO:1901259: chloroplast rRNA processing	3.12E-03
80	GO:0009903: chloroplast avoidance movement	3.12E-03
81	GO:0010027: thylakoid membrane organization	3.66E-03
82	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.68E-03
83	GO:0015693: magnesium ion transport	3.68E-03
84	GO:0035196: production of miRNAs involved in gene silencing by miRNA	3.68E-03
85	GO:0006605: protein targeting	4.27E-03
86	GO:0019375: galactolipid biosynthetic process	4.27E-03
87	GO:0009704: de-etiolation	4.27E-03
88	GO:0006633: fatty acid biosynthetic process	4.38E-03
89	GO:0006397: mRNA processing	4.67E-03
90	GO:0022900: electron transport chain	4.89E-03
91	GO:0098656: anion transmembrane transport	5.54E-03
92	GO:0019432: triglyceride biosynthetic process	5.54E-03
93	GO:0010206: photosystem II repair	5.54E-03
94	GO:0006783: heme biosynthetic process	5.54E-03
95	GO:0043067: regulation of programmed cell death	6.21E-03
96	GO:0006779: porphyrin-containing compound biosynthetic process	6.21E-03
97	GO:0010267: production of ta-siRNAs involved in RNA interference	6.21E-03
98	GO:1900865: chloroplast RNA modification	6.21E-03
99	GO:0031425: chloroplast RNA processing	6.21E-03
100	GO:0000103: sulfate assimilation	6.92E-03
101	GO:0009684: indoleacetic acid biosynthetic process	7.65E-03
102	GO:0019684: photosynthesis, light reaction	7.65E-03
103	GO:0009089: lysine biosynthetic process via diaminopimelate	7.65E-03
104	GO:0006415: translational termination	7.65E-03
105	GO:1903507: negative regulation of nucleic acid-templated transcription	7.65E-03
106	GO:0010114: response to red light	7.79E-03
107	GO:0005983: starch catabolic process	8.41E-03
108	GO:2000012: regulation of auxin polar transport	9.20E-03
109	GO:0030036: actin cytoskeleton organization	9.20E-03
110	GO:0090351: seedling development	1.09E-02
111	GO:0006071: glycerol metabolic process	1.17E-02
112	GO:0019344: cysteine biosynthetic process	1.26E-02
113	GO:0080147: root hair cell development	1.26E-02
114	GO:0006289: nucleotide-excision repair	1.26E-02
115	GO:0008299: isoprenoid biosynthetic process	1.35E-02
116	GO:0016575: histone deacetylation	1.35E-02
117	GO:0007017: microtubule-based process	1.35E-02
118	GO:0009768: photosynthesis, light harvesting in photosystem I	1.35E-02
119	GO:0031408: oxylipin biosynthetic process	1.45E-02
120	GO:0016114: terpenoid biosynthetic process	1.45E-02
121	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.54E-02
122	GO:0019748: secondary metabolic process	1.54E-02
123	GO:0009409: response to cold	1.57E-02
124	GO:0009306: protein secretion	1.74E-02
125	GO:0051028: mRNA transport	1.84E-02
126	GO:0009741: response to brassinosteroid	2.05E-02
127	GO:0010305: leaf vascular tissue pattern formation	2.05E-02
128	GO:0010197: polar nucleus fusion	2.05E-02
129	GO:0009646: response to absence of light	2.16E-02
130	GO:0007018: microtubule-based movement	2.16E-02
131	GO:0009790: embryo development	2.20E-02
132	GO:0009791: post-embryonic development	2.27E-02
133	GO:0010183: pollen tube guidance	2.27E-02
134	GO:0008654: phospholipid biosynthetic process	2.27E-02
135	GO:0006413: translational initiation	2.42E-02
136	GO:0010583: response to cyclopentenone	2.50E-02
137	GO:0009630: gravitropism	2.50E-02
138	GO:0030163: protein catabolic process	2.62E-02
139	GO:0010090: trichome morphogenesis	2.62E-02
140	GO:1901657: glycosyl compound metabolic process	2.62E-02
141	GO:0000910: cytokinesis	2.98E-02
142	GO:0016126: sterol biosynthetic process	3.10E-02
143	GO:0008380: RNA splicing	3.10E-02
144	GO:0009735: response to cytokinin	3.40E-02
145	GO:0010411: xyloglucan metabolic process	3.48E-02
146	GO:0009817: defense response to fungus, incompatible interaction	3.75E-02
147	GO:0018298: protein-chromophore linkage	3.75E-02
148	GO:0009416: response to light stimulus	3.80E-02
149	GO:0006499: N-terminal protein myristoylation	4.01E-02
150	GO:0007568: aging	4.15E-02
151	GO:0009867: jasmonic acid mediated signaling pathway	4.43E-02
152	GO:0045087: innate immune response	4.43E-02
153	GO:0009637: response to blue light	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0036033: mediator complex binding	0.00E+00
2	GO:0008176: tRNA (guanine-N7-)-methyltransferase activity	0.00E+00
3	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
4	GO:0005048: signal sequence binding	0.00E+00
5	GO:0004076: biotin synthase activity	0.00E+00
6	GO:0005363: maltose transmembrane transporter activity	0.00E+00
7	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
8	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
9	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
10	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
11	GO:0051721: protein phosphatase 2A binding	0.00E+00
12	GO:0042903: tubulin deacetylase activity	0.00E+00
13	GO:0050613: delta14-sterol reductase activity	0.00E+00
14	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
15	GO:0043014: alpha-tubulin binding	0.00E+00
16	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
17	GO:0070402: NADPH binding	9.82E-06
18	GO:0016851: magnesium chelatase activity	2.23E-05
19	GO:0016987: sigma factor activity	4.05E-05
20	GO:0001053: plastid sigma factor activity	4.05E-05
21	GO:0005525: GTP binding	1.15E-04
22	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	2.41E-04
23	GO:0046480: galactolipid galactosyltransferase activity	2.41E-04
24	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.41E-04
25	GO:0005227: calcium activated cation channel activity	2.41E-04
26	GO:0004856: xylulokinase activity	2.41E-04
27	GO:0004813: alanine-tRNA ligase activity	2.41E-04
28	GO:0004853: uroporphyrinogen decarboxylase activity	2.41E-04
29	GO:0042586: peptide deformylase activity	2.41E-04
30	GO:0046481: digalactosyldiacylglycerol synthase activity	2.41E-04
31	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.41E-04
32	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	2.41E-04
33	GO:0009977: proton motive force dependent protein transmembrane transporter activity	5.34E-04
34	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	5.34E-04
35	GO:0004817: cysteine-tRNA ligase activity	5.34E-04
36	GO:0009973: adenylyl-sulfate reductase activity	5.34E-04
37	GO:0016630: protochlorophyllide reductase activity	5.34E-04
38	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	5.34E-04
39	GO:0004512: inositol-3-phosphate synthase activity	5.34E-04
40	GO:0004829: threonine-tRNA ligase activity	5.34E-04
41	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	5.34E-04
42	GO:0080054: low-affinity nitrate transmembrane transporter activity	8.68E-04
43	GO:0015462: ATPase-coupled protein transmembrane transporter activity	8.68E-04
44	GO:0003913: DNA photolyase activity	8.68E-04
45	GO:0003924: GTPase activity	9.93E-04
46	GO:0005528: FK506 binding	1.05E-03
47	GO:0019201: nucleotide kinase activity	1.24E-03
48	GO:0035250: UDP-galactosyltransferase activity	1.24E-03
49	GO:0048487: beta-tubulin binding	1.24E-03
50	GO:0004792: thiosulfate sulfurtransferase activity	1.24E-03
51	GO:0016149: translation release factor activity, codon specific	1.24E-03
52	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.24E-03
53	GO:0043023: ribosomal large subunit binding	1.24E-03
54	GO:0035198: miRNA binding	1.24E-03
55	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.31E-03
56	GO:0004045: aminoacyl-tRNA hydrolase activity	1.65E-03
57	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.65E-03
58	GO:0070628: proteasome binding	1.65E-03
59	GO:0009044: xylan 1,4-beta-xylosidase activity	1.65E-03
60	GO:0046556: alpha-L-arabinofuranosidase activity	1.65E-03
61	GO:0016279: protein-lysine N-methyltransferase activity	1.65E-03
62	GO:0003959: NADPH dehydrogenase activity	2.11E-03
63	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.11E-03
64	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.11E-03
65	GO:0004040: amidase activity	2.11E-03
66	GO:0031593: polyubiquitin binding	2.60E-03
67	GO:0016832: aldehyde-lyase activity	3.12E-03
68	GO:0004017: adenylate kinase activity	3.12E-03
69	GO:0005261: cation channel activity	3.12E-03
70	GO:0009927: histidine phosphotransfer kinase activity	3.12E-03
71	GO:0004144: diacylglycerol O-acyltransferase activity	3.12E-03
72	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.12E-03
73	GO:0005200: structural constituent of cytoskeleton	3.26E-03
74	GO:0009881: photoreceptor activity	3.68E-03
75	GO:0008312: 7S RNA binding	4.27E-03
76	GO:0004033: aldo-keto reductase (NADP) activity	4.27E-03
77	GO:0043022: ribosome binding	4.27E-03
78	GO:0008236: serine-type peptidase activity	4.53E-03
79	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	4.89E-03
80	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	5.51E-03
81	GO:0003747: translation release factor activity	5.54E-03
82	GO:0003729: mRNA binding	6.03E-03
83	GO:0008559: xenobiotic-transporting ATPase activity	7.65E-03
84	GO:0000049: tRNA binding	8.41E-03
85	GO:0051537: 2 iron, 2 sulfur cluster binding	8.43E-03
86	GO:0003725: double-stranded RNA binding	9.20E-03
87	GO:0005315: inorganic phosphate transmembrane transporter activity	9.20E-03
88	GO:0015095: magnesium ion transmembrane transporter activity	9.20E-03
89	GO:0031072: heat shock protein binding	9.20E-03
90	GO:0008266: poly(U) RNA binding	1.00E-02
91	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.00E-02
92	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.05E-02
93	GO:0031409: pigment binding	1.17E-02
94	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.17E-02
95	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.17E-02
96	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.17E-02
97	GO:0003723: RNA binding	1.21E-02
98	GO:0004407: histone deacetylase activity	1.26E-02
99	GO:0043130: ubiquitin binding	1.26E-02
100	GO:0003714: transcription corepressor activity	1.26E-02
101	GO:0051536: iron-sulfur cluster binding	1.26E-02
102	GO:0004176: ATP-dependent peptidase activity	1.45E-02
103	GO:0051082: unfolded protein binding	1.50E-02
104	GO:0042803: protein homodimerization activity	1.51E-02
105	GO:0016853: isomerase activity	2.16E-02
106	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.62E-02
107	GO:0003684: damaged DNA binding	2.73E-02
108	GO:0008483: transaminase activity	2.85E-02
109	GO:0008237: metallopeptidase activity	2.85E-02
110	GO:0016597: amino acid binding	2.98E-02
111	GO:0003743: translation initiation factor activity	3.04E-02
112	GO:0016168: chlorophyll binding	3.23E-02
113	GO:0005524: ATP binding	3.29E-02
114	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.30E-02
115	GO:0102483: scopolin beta-glucosidase activity	3.48E-02
116	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.75E-02
117	GO:0005096: GTPase activator activity	3.88E-02
118	GO:0030145: manganese ion binding	4.15E-02
119	GO:0003746: translation elongation factor activity	4.43E-02
120	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.43E-02
121	GO:0003993: acid phosphatase activity	4.57E-02
122	GO:0050660: flavin adenine dinucleotide binding	4.63E-02
123	GO:0008422: beta-glucosidase activity	4.71E-02
124	GO:0051539: 4 iron, 4 sulfur cluster binding	4.86E-02