GO Enrichment Analysis of Co-expressed Genes with
AT4G00100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 2 | GO:0033206: meiotic cytokinesis | 0.00E+00 |
| 3 | GO:0031081: nuclear pore distribution | 0.00E+00 |
| 4 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 5 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 6 | GO:0033473: indoleacetic acid conjugate metabolic process | 0.00E+00 |
| 7 | GO:1905615: positive regulation of developmental vegetative growth | 0.00E+00 |
| 8 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 9 | GO:2000033: regulation of seed dormancy process | 1.76E-05 |
| 10 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 3.18E-05 |
| 11 | GO:0000972: transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery | 6.91E-05 |
| 12 | GO:0043971: histone H3-K18 acetylation | 6.91E-05 |
| 13 | GO:1903866: palisade mesophyll development | 6.91E-05 |
| 14 | GO:0009658: chloroplast organization | 1.13E-04 |
| 15 | GO:0018022: peptidyl-lysine methylation | 1.66E-04 |
| 16 | GO:0009967: positive regulation of signal transduction | 1.66E-04 |
| 17 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.94E-04 |
| 18 | GO:0009863: salicylic acid mediated signaling pathway | 1.94E-04 |
| 19 | GO:0010187: negative regulation of seed germination | 1.94E-04 |
| 20 | GO:0090391: granum assembly | 2.81E-04 |
| 21 | GO:0010476: gibberellin mediated signaling pathway | 2.81E-04 |
| 22 | GO:0071705: nitrogen compound transport | 2.81E-04 |
| 23 | GO:1901332: negative regulation of lateral root development | 4.06E-04 |
| 24 | GO:0006168: adenine salvage | 4.06E-04 |
| 25 | GO:1902290: positive regulation of defense response to oomycetes | 4.06E-04 |
| 26 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 4.06E-04 |
| 27 | GO:0006166: purine ribonucleoside salvage | 4.06E-04 |
| 28 | GO:0006808: regulation of nitrogen utilization | 5.42E-04 |
| 29 | GO:1900864: mitochondrial RNA modification | 5.42E-04 |
| 30 | GO:0071249: cellular response to nitrate | 5.42E-04 |
| 31 | GO:0009739: response to gibberellin | 6.55E-04 |
| 32 | GO:0044209: AMP salvage | 6.87E-04 |
| 33 | GO:0006405: RNA export from nucleus | 6.87E-04 |
| 34 | GO:0010029: regulation of seed germination | 7.30E-04 |
| 35 | GO:0006655: phosphatidylglycerol biosynthetic process | 8.40E-04 |
| 36 | GO:0042793: transcription from plastid promoter | 8.40E-04 |
| 37 | GO:0042176: regulation of protein catabolic process | 8.40E-04 |
| 38 | GO:1901371: regulation of leaf morphogenesis | 8.40E-04 |
| 39 | GO:0035435: phosphate ion transmembrane transport | 8.40E-04 |
| 40 | GO:0006355: regulation of transcription, DNA-templated | 8.61E-04 |
| 41 | GO:0010218: response to far red light | 9.79E-04 |
| 42 | GO:1901001: negative regulation of response to salt stress | 9.99E-04 |
| 43 | GO:0009867: jasmonic acid mediated signaling pathway | 1.12E-03 |
| 44 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.34E-03 |
| 45 | GO:0042255: ribosome assembly | 1.34E-03 |
| 46 | GO:0006353: DNA-templated transcription, termination | 1.34E-03 |
| 47 | GO:0044030: regulation of DNA methylation | 1.53E-03 |
| 48 | GO:0010233: phloem transport | 1.53E-03 |
| 49 | GO:0048507: meristem development | 1.73E-03 |
| 50 | GO:0042538: hyperosmotic salinity response | 1.78E-03 |
| 51 | GO:0006349: regulation of gene expression by genetic imprinting | 1.93E-03 |
| 52 | GO:1900426: positive regulation of defense response to bacterium | 1.93E-03 |
| 53 | GO:0006259: DNA metabolic process | 2.14E-03 |
| 54 | GO:0010048: vernalization response | 2.14E-03 |
| 55 | GO:0006325: chromatin organization | 2.14E-03 |
| 56 | GO:0006265: DNA topological change | 2.36E-03 |
| 57 | GO:0009740: gibberellic acid mediated signaling pathway | 2.54E-03 |
| 58 | GO:0015706: nitrate transport | 2.58E-03 |
| 59 | GO:0010105: negative regulation of ethylene-activated signaling pathway | 2.58E-03 |
| 60 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.58E-03 |
| 61 | GO:0010102: lateral root morphogenesis | 2.82E-03 |
| 62 | GO:0010540: basipetal auxin transport | 3.06E-03 |
| 63 | GO:0010020: chloroplast fission | 3.06E-03 |
| 64 | GO:0080188: RNA-directed DNA methylation | 3.30E-03 |
| 65 | GO:0010167: response to nitrate | 3.30E-03 |
| 66 | GO:0000027: ribosomal large subunit assembly | 3.81E-03 |
| 67 | GO:0009790: embryo development | 3.91E-03 |
| 68 | GO:0071215: cellular response to abscisic acid stimulus | 4.91E-03 |
| 69 | GO:0010501: RNA secondary structure unwinding | 5.80E-03 |
| 70 | GO:0006606: protein import into nucleus | 5.80E-03 |
| 71 | GO:0046323: glucose import | 6.11E-03 |
| 72 | GO:0009960: endosperm development | 6.11E-03 |
| 73 | GO:0010305: leaf vascular tissue pattern formation | 6.11E-03 |
| 74 | GO:0007059: chromosome segregation | 6.42E-03 |
| 75 | GO:0009749: response to glucose | 6.74E-03 |
| 76 | GO:0008654: phospholipid biosynthetic process | 6.74E-03 |
| 77 | GO:0032502: developmental process | 7.40E-03 |
| 78 | GO:0010252: auxin homeostasis | 8.08E-03 |
| 79 | GO:0009723: response to ethylene | 8.25E-03 |
| 80 | GO:0010027: thylakoid membrane organization | 9.13E-03 |
| 81 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.15E-03 |
| 82 | GO:0009627: systemic acquired resistance | 9.87E-03 |
| 83 | GO:0048767: root hair elongation | 1.14E-02 |
| 84 | GO:0006811: ion transport | 1.18E-02 |
| 85 | GO:0009910: negative regulation of flower development | 1.22E-02 |
| 86 | GO:0009651: response to salt stress | 1.37E-02 |
| 87 | GO:0009926: auxin polar transport | 1.56E-02 |
| 88 | GO:0009640: photomorphogenesis | 1.56E-02 |
| 89 | GO:0031347: regulation of defense response | 1.78E-02 |
| 90 | GO:0009734: auxin-activated signaling pathway | 1.85E-02 |
| 91 | GO:0006351: transcription, DNA-templated | 1.95E-02 |
| 92 | GO:0006417: regulation of translation | 2.07E-02 |
| 93 | GO:0048367: shoot system development | 2.22E-02 |
| 94 | GO:0009738: abscisic acid-activated signaling pathway | 2.25E-02 |
| 95 | GO:0009416: response to light stimulus | 2.33E-02 |
| 96 | GO:0045893: positive regulation of transcription, DNA-templated | 2.67E-02 |
| 97 | GO:0009737: response to abscisic acid | 2.72E-02 |
| 98 | GO:0009058: biosynthetic process | 3.01E-02 |
| 99 | GO:0009793: embryo development ending in seed dormancy | 3.02E-02 |
| 100 | GO:0009845: seed germination | 3.07E-02 |
| 101 | GO:0016310: phosphorylation | 3.25E-02 |
| 102 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.77E-02 |
| 103 | GO:0008380: RNA splicing | 4.14E-02 |
| 104 | GO:0009617: response to bacterium | 4.14E-02 |
| 105 | GO:0009414: response to water deprivation | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000989: transcription factor activity, transcription factor binding | 5.07E-05 |
| 2 | GO:0034335: DNA supercoiling activity | 6.91E-05 |
| 3 | GO:0005078: MAP-kinase scaffold activity | 1.66E-04 |
| 4 | GO:0016805: dipeptidase activity | 2.81E-04 |
| 5 | GO:0004180: carboxypeptidase activity | 2.81E-04 |
| 6 | GO:0032947: protein complex scaffold | 2.81E-04 |
| 7 | GO:0003727: single-stranded RNA binding | 3.11E-04 |
| 8 | GO:0003999: adenine phosphoribosyltransferase activity | 4.06E-04 |
| 9 | GO:0005354: galactose transmembrane transporter activity | 4.06E-04 |
| 10 | GO:0003916: DNA topoisomerase activity | 4.06E-04 |
| 11 | GO:0016279: protein-lysine N-methyltransferase activity | 5.42E-04 |
| 12 | GO:0010385: double-stranded methylated DNA binding | 5.42E-04 |
| 13 | GO:0004605: phosphatidate cytidylyltransferase activity | 8.40E-04 |
| 14 | GO:0080030: methyl indole-3-acetate esterase activity | 8.40E-04 |
| 15 | GO:0000293: ferric-chelate reductase activity | 8.40E-04 |
| 16 | GO:0003697: single-stranded DNA binding | 1.12E-03 |
| 17 | GO:0017056: structural constituent of nuclear pore | 1.34E-03 |
| 18 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.53E-03 |
| 19 | GO:0009672: auxin:proton symporter activity | 1.93E-03 |
| 20 | GO:0005487: nucleocytoplasmic transporter activity | 1.93E-03 |
| 21 | GO:0003690: double-stranded DNA binding | 1.97E-03 |
| 22 | GO:0015114: phosphate ion transmembrane transporter activity | 2.82E-03 |
| 23 | GO:0010329: auxin efflux transmembrane transporter activity | 2.82E-03 |
| 24 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 3.19E-03 |
| 25 | GO:0003677: DNA binding | 4.99E-03 |
| 26 | GO:0018024: histone-lysine N-methyltransferase activity | 5.50E-03 |
| 27 | GO:0004402: histone acetyltransferase activity | 5.80E-03 |
| 28 | GO:0001085: RNA polymerase II transcription factor binding | 6.11E-03 |
| 29 | GO:0005355: glucose transmembrane transporter activity | 6.42E-03 |
| 30 | GO:0016788: hydrolase activity, acting on ester bonds | 7.27E-03 |
| 31 | GO:0004004: ATP-dependent RNA helicase activity | 1.02E-02 |
| 32 | GO:0004871: signal transducer activity | 1.11E-02 |
| 33 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 1.22E-02 |
| 34 | GO:0042393: histone binding | 1.43E-02 |
| 35 | GO:0003723: RNA binding | 1.59E-02 |
| 36 | GO:0003729: mRNA binding | 1.74E-02 |
| 37 | GO:0003777: microtubule motor activity | 2.07E-02 |
| 38 | GO:0004650: polygalacturonase activity | 2.32E-02 |
| 39 | GO:0016874: ligase activity | 2.37E-02 |
| 40 | GO:0004674: protein serine/threonine kinase activity | 2.43E-02 |
| 41 | GO:0008026: ATP-dependent helicase activity | 2.58E-02 |
| 42 | GO:0019843: rRNA binding | 2.90E-02 |
| 43 | GO:0016829: lyase activity | 3.07E-02 |
| 44 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.18E-02 |
| 45 | GO:0015144: carbohydrate transmembrane transporter activity | 3.30E-02 |
| 46 | GO:0005351: sugar:proton symporter activity | 3.59E-02 |