Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G63420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006216: cytidine catabolic process0.00E+00
2GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
3GO:0006858: extracellular transport0.00E+00
4GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
5GO:0010401: pectic galactan metabolic process0.00E+00
6GO:0051553: flavone biosynthetic process0.00E+00
7GO:0036503: ERAD pathway0.00E+00
8GO:0006497: protein lipidation0.00E+00
9GO:0072722: response to amitrole0.00E+00
10GO:0010055: atrichoblast differentiation0.00E+00
11GO:0006654: phosphatidic acid biosynthetic process0.00E+00
12GO:0002237: response to molecule of bacterial origin1.61E-04
13GO:0002238: response to molecule of fungal origin2.55E-04
14GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.51E-04
15GO:0033306: phytol metabolic process4.51E-04
16GO:0032491: detection of molecule of fungal origin4.51E-04
17GO:0060862: negative regulation of floral organ abscission4.51E-04
18GO:0010045: response to nickel cation4.51E-04
19GO:0019605: butyrate metabolic process4.51E-04
20GO:0042759: long-chain fatty acid biosynthetic process4.51E-04
21GO:0006083: acetate metabolic process4.51E-04
22GO:1990542: mitochondrial transmembrane transport4.51E-04
23GO:0032107: regulation of response to nutrient levels4.51E-04
24GO:0016337: single organismal cell-cell adhesion4.51E-04
25GO:0016559: peroxisome fission5.51E-04
26GO:0050832: defense response to fungus7.67E-04
27GO:0052541: plant-type cell wall cellulose metabolic process9.73E-04
28GO:0010115: regulation of abscisic acid biosynthetic process9.73E-04
29GO:0010042: response to manganese ion9.73E-04
30GO:0002240: response to molecule of oomycetes origin9.73E-04
31GO:0010271: regulation of chlorophyll catabolic process9.73E-04
32GO:0019725: cellular homeostasis9.73E-04
33GO:0031349: positive regulation of defense response9.73E-04
34GO:0015012: heparan sulfate proteoglycan biosynthetic process9.73E-04
35GO:0046939: nucleotide phosphorylation9.73E-04
36GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.73E-04
37GO:0006024: glycosaminoglycan biosynthetic process9.73E-04
38GO:0000266: mitochondrial fission1.45E-03
39GO:0010272: response to silver ion1.58E-03
40GO:0051176: positive regulation of sulfur metabolic process1.58E-03
41GO:0090630: activation of GTPase activity1.58E-03
42GO:0010186: positive regulation of cellular defense response1.58E-03
43GO:0034605: cellular response to heat1.86E-03
44GO:0070301: cellular response to hydrogen peroxide2.29E-03
45GO:0002239: response to oomycetes2.29E-03
46GO:0046513: ceramide biosynthetic process2.29E-03
47GO:0048638: regulation of developmental growth3.08E-03
48GO:0033358: UDP-L-arabinose biosynthetic process3.08E-03
49GO:0033356: UDP-L-arabinose metabolic process3.08E-03
50GO:0006878: cellular copper ion homeostasis3.08E-03
51GO:0060548: negative regulation of cell death3.08E-03
52GO:0045227: capsule polysaccharide biosynthetic process3.08E-03
53GO:0016998: cell wall macromolecule catabolic process3.14E-03
54GO:0009814: defense response, incompatible interaction3.44E-03
55GO:0010150: leaf senescence3.68E-03
56GO:0015031: protein transport3.71E-03
57GO:0000304: response to singlet oxygen3.95E-03
58GO:0098719: sodium ion import across plasma membrane3.95E-03
59GO:0005513: detection of calcium ion3.95E-03
60GO:0031365: N-terminal protein amino acid modification3.95E-03
61GO:0006097: glyoxylate cycle3.95E-03
62GO:0009229: thiamine diphosphate biosynthetic process3.95E-03
63GO:0009435: NAD biosynthetic process3.95E-03
64GO:0006665: sphingolipid metabolic process3.95E-03
65GO:0042391: regulation of membrane potential4.78E-03
66GO:0045040: protein import into mitochondrial outer membrane4.89E-03
67GO:0006139: nucleobase-containing compound metabolic process4.89E-03
68GO:0042176: regulation of protein catabolic process4.89E-03
69GO:0010337: regulation of salicylic acid metabolic process4.89E-03
70GO:0009117: nucleotide metabolic process4.89E-03
71GO:0018258: protein O-linked glycosylation via hydroxyproline4.89E-03
72GO:0006014: D-ribose metabolic process4.89E-03
73GO:0009228: thiamine biosynthetic process4.89E-03
74GO:0009972: cytidine deamination4.89E-03
75GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione4.89E-03
76GO:0010942: positive regulation of cell death4.89E-03
77GO:0010405: arabinogalactan protein metabolic process4.89E-03
78GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.89E-03
79GO:0009751: response to salicylic acid4.96E-03
80GO:0006486: protein glycosylation5.11E-03
81GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.90E-03
82GO:0009612: response to mechanical stimulus5.90E-03
83GO:0010183: pollen tube guidance5.95E-03
84GO:0042742: defense response to bacterium6.09E-03
85GO:0071446: cellular response to salicylic acid stimulus6.98E-03
86GO:1900056: negative regulation of leaf senescence6.98E-03
87GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.98E-03
88GO:0010038: response to metal ion6.98E-03
89GO:0009610: response to symbiotic fungus6.98E-03
90GO:0046470: phosphatidylcholine metabolic process6.98E-03
91GO:0009620: response to fungus7.14E-03
92GO:0030163: protein catabolic process7.26E-03
93GO:0006914: autophagy7.73E-03
94GO:0009850: auxin metabolic process8.12E-03
95GO:0006605: protein targeting8.12E-03
96GO:0006102: isocitrate metabolic process8.12E-03
97GO:0009615: response to virus9.24E-03
98GO:0006367: transcription initiation from RNA polymerase II promoter9.33E-03
99GO:0010204: defense response signaling pathway, resistance gene-independent9.33E-03
100GO:0009816: defense response to bacterium, incompatible interaction9.78E-03
101GO:0009627: systemic acquired resistance1.03E-02
102GO:0007338: single fertilization1.06E-02
103GO:0019432: triglyceride biosynthetic process1.06E-02
104GO:0006950: response to stress1.09E-02
105GO:0007165: signal transduction1.18E-02
106GO:0090332: stomatal closure1.19E-02
107GO:0048268: clathrin coat assembly1.19E-02
108GO:0048354: mucilage biosynthetic process involved in seed coat development1.19E-02
109GO:0010380: regulation of chlorophyll biosynthetic process1.19E-02
110GO:0008202: steroid metabolic process1.19E-02
111GO:0051453: regulation of intracellular pH1.19E-02
112GO:1900426: positive regulation of defense response to bacterium1.19E-02
113GO:0009738: abscisic acid-activated signaling pathway1.30E-02
114GO:0006032: chitin catabolic process1.33E-02
115GO:0006886: intracellular protein transport1.37E-02
116GO:0010043: response to zinc ion1.40E-02
117GO:0009682: induced systemic resistance1.47E-02
118GO:0000272: polysaccharide catabolic process1.47E-02
119GO:0048229: gametophyte development1.47E-02
120GO:0030148: sphingolipid biosynthetic process1.47E-02
121GO:0016051: carbohydrate biosynthetic process1.54E-02
122GO:0006790: sulfur compound metabolic process1.62E-02
123GO:0045037: protein import into chloroplast stroma1.62E-02
124GO:0016042: lipid catabolic process1.72E-02
125GO:0006626: protein targeting to mitochondrion1.78E-02
126GO:0010102: lateral root morphogenesis1.78E-02
127GO:0006629: lipid metabolic process1.79E-02
128GO:0006897: endocytosis1.83E-02
129GO:0051707: response to other organism1.99E-02
130GO:0009225: nucleotide-sugar metabolic process2.10E-02
131GO:0070588: calcium ion transmembrane transport2.10E-02
132GO:0046854: phosphatidylinositol phosphorylation2.10E-02
133GO:0007033: vacuole organization2.10E-02
134GO:0009636: response to toxic substance2.23E-02
135GO:0034976: response to endoplasmic reticulum stress2.27E-02
136GO:0030150: protein import into mitochondrial matrix2.44E-02
137GO:0005992: trehalose biosynthetic process2.44E-02
138GO:0006952: defense response2.45E-02
139GO:0009846: pollen germination2.50E-02
140GO:0010073: meristem maintenance2.62E-02
141GO:0009269: response to desiccation2.81E-02
142GO:0006508: proteolysis2.82E-02
143GO:0030245: cellulose catabolic process2.99E-02
144GO:0016226: iron-sulfur cluster assembly2.99E-02
145GO:0007005: mitochondrion organization2.99E-02
146GO:0080092: regulation of pollen tube growth2.99E-02
147GO:0071456: cellular response to hypoxia2.99E-02
148GO:0009411: response to UV3.18E-02
149GO:0010227: floral organ abscission3.18E-02
150GO:0006012: galactose metabolic process3.18E-02
151GO:0010584: pollen exine formation3.38E-02
152GO:0070417: cellular response to cold3.58E-02
153GO:0042147: retrograde transport, endosome to Golgi3.58E-02
154GO:0010087: phloem or xylem histogenesis3.78E-02
155GO:0016192: vesicle-mediated transport3.89E-02
156GO:0018105: peptidyl-serine phosphorylation3.92E-02
157GO:0006885: regulation of pH3.99E-02
158GO:0045489: pectin biosynthetic process3.99E-02
159GO:0071472: cellular response to salt stress3.99E-02
160GO:0006814: sodium ion transport4.20E-02
161GO:0006623: protein targeting to vacuole4.41E-02
162GO:0019252: starch biosynthetic process4.41E-02
163GO:0045454: cell redox homeostasis4.55E-02
164GO:0071554: cell wall organization or biogenesis4.63E-02
165GO:0002229: defense response to oomycetes4.63E-02
166GO:0006891: intra-Golgi vesicle-mediated transport4.63E-02
167GO:0010193: response to ozone4.63E-02
RankGO TermAdjusted P value
1GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
2GO:0008734: L-aspartate oxidase activity0.00E+00
3GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
4GO:0050334: thiaminase activity0.00E+00
5GO:0047844: deoxycytidine deaminase activity0.00E+00
6GO:0005212: structural constituent of eye lens0.00E+00
7GO:0034338: short-chain carboxylesterase activity0.00E+00
8GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
9GO:0018580: nitronate monooxygenase activity0.00E+00
10GO:0019205: nucleobase-containing compound kinase activity0.00E+00
11GO:0033759: flavone synthase activity0.00E+00
12GO:0051766: inositol trisphosphate kinase activity0.00E+00
13GO:0019779: Atg8 activating enzyme activity8.98E-06
14GO:0015927: trehalase activity4.51E-04
15GO:0000824: inositol tetrakisphosphate 3-kinase activity4.51E-04
16GO:0047326: inositol tetrakisphosphate 5-kinase activity4.51E-04
17GO:0047760: butyrate-CoA ligase activity4.51E-04
18GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity4.51E-04
19GO:0019786: Atg8-specific protease activity4.51E-04
20GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity4.51E-04
21GO:0004649: poly(ADP-ribose) glycohydrolase activity4.51E-04
22GO:0003987: acetate-CoA ligase activity4.51E-04
23GO:0004714: transmembrane receptor protein tyrosine kinase activity5.51E-04
24GO:0004630: phospholipase D activity6.72E-04
25GO:0008970: phosphatidylcholine 1-acylhydrolase activity6.72E-04
26GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.72E-04
27GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity9.73E-04
28GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity9.73E-04
29GO:0000774: adenyl-nucleotide exchange factor activity9.73E-04
30GO:0032934: sterol binding9.73E-04
31GO:0008805: carbon-monoxide oxygenase activity9.73E-04
32GO:1990585: hydroxyproline O-arabinosyltransferase activity9.73E-04
33GO:0045140: inositol phosphoceramide synthase activity9.73E-04
34GO:0050736: O-malonyltransferase activity9.73E-04
35GO:0004385: guanylate kinase activity9.73E-04
36GO:0052739: phosphatidylserine 1-acylhydrolase activity9.73E-04
37GO:0050291: sphingosine N-acyltransferase activity9.73E-04
38GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity9.73E-04
39GO:0042409: caffeoyl-CoA O-methyltransferase activity1.58E-03
40GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.58E-03
41GO:0016595: glutamate binding1.58E-03
42GO:0000030: mannosyltransferase activity1.58E-03
43GO:0004806: triglyceride lipase activity1.63E-03
44GO:0030553: cGMP binding2.09E-03
45GO:0004190: aspartic-type endopeptidase activity2.09E-03
46GO:0030552: cAMP binding2.09E-03
47GO:0019201: nucleotide kinase activity2.29E-03
48GO:0035529: NADH pyrophosphatase activity2.29E-03
49GO:0004416: hydroxyacylglutathione hydrolase activity2.29E-03
50GO:0010178: IAA-amino acid conjugate hydrolase activity2.29E-03
51GO:0004449: isocitrate dehydrogenase (NAD+) activity2.29E-03
52GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.29E-03
53GO:0017077: oxidative phosphorylation uncoupler activity2.29E-03
54GO:0005216: ion channel activity2.85E-03
55GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity3.08E-03
56GO:0019776: Atg8 ligase activity3.08E-03
57GO:0050373: UDP-arabinose 4-epimerase activity3.08E-03
58GO:0008374: O-acyltransferase activity3.95E-03
59GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.95E-03
60GO:0004623: phospholipase A2 activity3.95E-03
61GO:0005496: steroid binding3.95E-03
62GO:0047631: ADP-ribose diphosphatase activity3.95E-03
63GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.95E-03
64GO:0030551: cyclic nucleotide binding4.78E-03
65GO:0005249: voltage-gated potassium channel activity4.78E-03
66GO:1990714: hydroxyproline O-galactosyltransferase activity4.89E-03
67GO:0047714: galactolipase activity4.89E-03
68GO:0000210: NAD+ diphosphatase activity4.89E-03
69GO:0016208: AMP binding4.89E-03
70GO:0016301: kinase activity5.83E-03
71GO:0004126: cytidine deaminase activity5.90E-03
72GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.90E-03
73GO:0004017: adenylate kinase activity5.90E-03
74GO:0003950: NAD+ ADP-ribosyltransferase activity5.90E-03
75GO:0004747: ribokinase activity5.90E-03
76GO:0004144: diacylglycerol O-acyltransferase activity5.90E-03
77GO:0003978: UDP-glucose 4-epimerase activity5.90E-03
78GO:0051920: peroxiredoxin activity5.90E-03
79GO:0046872: metal ion binding6.08E-03
80GO:0008235: metalloexopeptidase activity6.98E-03
81GO:0008320: protein transmembrane transporter activity6.98E-03
82GO:0015385: sodium:proton antiporter activity7.26E-03
83GO:0005544: calcium-dependent phospholipid binding8.12E-03
84GO:0008865: fructokinase activity8.12E-03
85GO:0004708: MAP kinase kinase activity8.12E-03
86GO:0016209: antioxidant activity8.12E-03
87GO:0051213: dioxygenase activity9.24E-03
88GO:0008142: oxysterol binding9.33E-03
89GO:0071949: FAD binding1.06E-02
90GO:0004743: pyruvate kinase activity1.19E-02
91GO:0030955: potassium ion binding1.19E-02
92GO:0004252: serine-type endopeptidase activity1.22E-02
93GO:0008047: enzyme activator activity1.33E-02
94GO:0015020: glucuronosyltransferase activity1.33E-02
95GO:0004713: protein tyrosine kinase activity1.33E-02
96GO:0004805: trehalose-phosphatase activity1.33E-02
97GO:0030234: enzyme regulator activity1.33E-02
98GO:0004568: chitinase activity1.33E-02
99GO:0008171: O-methyltransferase activity1.33E-02
100GO:0005545: 1-phosphatidylinositol binding1.33E-02
101GO:0030145: manganese ion binding1.40E-02
102GO:0015386: potassium:proton antiporter activity1.47E-02
103GO:0004177: aminopeptidase activity1.47E-02
104GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.54E-02
105GO:0008378: galactosyltransferase activity1.62E-02
106GO:0005388: calcium-transporting ATPase activity1.78E-02
107GO:0008194: UDP-glycosyltransferase activity1.86E-02
108GO:0008061: chitin binding2.10E-02
109GO:0004867: serine-type endopeptidase inhibitor activity2.10E-02
110GO:0001046: core promoter sequence-specific DNA binding2.44E-02
111GO:0051087: chaperone binding2.62E-02
112GO:0005516: calmodulin binding2.77E-02
113GO:0035251: UDP-glucosyltransferase activity2.81E-02
114GO:0008408: 3'-5' exonuclease activity2.81E-02
115GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.99E-02
116GO:0008810: cellulase activity3.18E-02
117GO:0003756: protein disulfide isomerase activity3.38E-02
118GO:0004499: N,N-dimethylaniline monooxygenase activity3.38E-02
119GO:0080044: quercetin 7-O-glucosyltransferase activity3.48E-02
120GO:0080043: quercetin 3-O-glucosyltransferase activity3.48E-02
121GO:0005102: receptor binding3.58E-02
122GO:0047134: protein-disulfide reductase activity3.58E-02
123GO:0005451: monovalent cation:proton antiporter activity3.78E-02
124GO:0004674: protein serine/threonine kinase activity3.81E-02
125GO:0005509: calcium ion binding3.95E-02
126GO:0004527: exonuclease activity3.99E-02
127GO:0030276: clathrin binding3.99E-02
128GO:0015299: solute:proton antiporter activity4.20E-02
129GO:0004791: thioredoxin-disulfide reductase activity4.20E-02
130GO:0016758: transferase activity, transferring hexosyl groups4.63E-02
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Gene type



Gene DE type