Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G62780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006654: phosphatidic acid biosynthetic process0.00E+00
2GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
3GO:0006216: cytidine catabolic process0.00E+00
4GO:0010407: non-classical arabinogalactan protein metabolic process0.00E+00
5GO:0002084: protein depalmitoylation0.00E+00
6GO:0016574: histone ubiquitination0.00E+00
7GO:0009312: oligosaccharide biosynthetic process0.00E+00
8GO:0046865: terpenoid transport0.00E+00
9GO:0051707: response to other organism2.92E-06
10GO:0009751: response to salicylic acid1.79E-04
11GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.60E-04
12GO:0009814: defense response, incompatible interaction2.64E-04
13GO:0071446: cellular response to salicylic acid stimulus3.37E-04
14GO:0031123: RNA 3'-end processing3.75E-04
15GO:0071076: RNA 3' uridylation3.75E-04
16GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.75E-04
17GO:0090567: reproductive shoot system development3.75E-04
18GO:0009700: indole phytoalexin biosynthetic process3.75E-04
19GO:0098789: pre-mRNA cleavage required for polyadenylation3.75E-04
20GO:0042868: antisense RNA metabolic process3.75E-04
21GO:0042759: long-chain fatty acid biosynthetic process3.75E-04
22GO:1900150: regulation of defense response to fungus4.22E-04
23GO:0006623: protein targeting to vacuole5.46E-04
24GO:0015709: thiosulfate transport8.15E-04
25GO:0071422: succinate transmembrane transport8.15E-04
26GO:0046939: nucleotide phosphorylation8.15E-04
27GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.15E-04
28GO:1902066: regulation of cell wall pectin metabolic process8.15E-04
29GO:0042853: L-alanine catabolic process8.15E-04
30GO:0007584: response to nutrient8.15E-04
31GO:0006996: organelle organization8.15E-04
32GO:0009156: ribonucleoside monophosphate biosynthetic process8.15E-04
33GO:0042742: defense response to bacterium1.08E-03
34GO:0015783: GDP-fucose transport1.32E-03
35GO:0006517: protein deglycosylation1.32E-03
36GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.32E-03
37GO:0015692: lead ion transport1.32E-03
38GO:0060968: regulation of gene silencing1.32E-03
39GO:0080168: abscisic acid transport1.32E-03
40GO:0048586: regulation of long-day photoperiodism, flowering1.32E-03
41GO:0032922: circadian regulation of gene expression1.32E-03
42GO:0061158: 3'-UTR-mediated mRNA destabilization1.32E-03
43GO:1901672: positive regulation of systemic acquired resistance1.32E-03
44GO:0006499: N-terminal protein myristoylation1.49E-03
45GO:0042343: indole glucosinolate metabolic process1.60E-03
46GO:0006515: misfolded or incompletely synthesized protein catabolic process1.91E-03
47GO:0055089: fatty acid homeostasis1.91E-03
48GO:0060964: regulation of gene silencing by miRNA1.91E-03
49GO:0015729: oxaloacetate transport1.91E-03
50GO:0010306: rhamnogalacturonan II biosynthetic process1.91E-03
51GO:0010104: regulation of ethylene-activated signaling pathway1.91E-03
52GO:0010731: protein glutathionylation1.91E-03
53GO:0006516: glycoprotein catabolic process1.91E-03
54GO:1902290: positive regulation of defense response to oomycetes1.91E-03
55GO:0046513: ceramide biosynthetic process1.91E-03
56GO:0098542: defense response to other organism2.39E-03
57GO:0048278: vesicle docking2.39E-03
58GO:0009165: nucleotide biosynthetic process2.56E-03
59GO:0010363: regulation of plant-type hypersensitive response2.56E-03
60GO:0010107: potassium ion import2.56E-03
61GO:0010188: response to microbial phytotoxin2.56E-03
62GO:0000209: protein polyubiquitination2.59E-03
63GO:0071456: cellular response to hypoxia2.62E-03
64GO:0009636: response to toxic substance2.86E-03
65GO:0031365: N-terminal protein amino acid modification3.28E-03
66GO:0009435: NAD biosynthetic process3.28E-03
67GO:0009247: glycolipid biosynthetic process3.28E-03
68GO:0071423: malate transmembrane transport3.28E-03
69GO:0071368: cellular response to cytokinin stimulus3.28E-03
70GO:0006486: protein glycosylation3.60E-03
71GO:0042176: regulation of protein catabolic process4.05E-03
72GO:0035435: phosphate ion transmembrane transport4.05E-03
73GO:0002238: response to molecule of fungal origin4.05E-03
74GO:0009972: cytidine deamination4.05E-03
75GO:0010193: response to ozone4.84E-03
76GO:0080113: regulation of seed growth4.88E-03
77GO:0006952: defense response5.26E-03
78GO:0045995: regulation of embryonic development5.77E-03
79GO:0046470: phosphatidylcholine metabolic process5.77E-03
80GO:1900056: negative regulation of leaf senescence5.77E-03
81GO:0080186: developmental vegetative growth5.77E-03
82GO:2000014: regulation of endosperm development5.77E-03
83GO:0008272: sulfate transport5.77E-03
84GO:0051607: defense response to virus6.62E-03
85GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.70E-03
86GO:0009850: auxin metabolic process6.70E-03
87GO:0019375: galactolipid biosynthetic process6.70E-03
88GO:0009816: defense response to bacterium, incompatible interaction7.42E-03
89GO:2000031: regulation of salicylic acid mediated signaling pathway7.69E-03
90GO:0006002: fructose 6-phosphate metabolic process7.69E-03
91GO:0001558: regulation of cell growth7.69E-03
92GO:0006367: transcription initiation from RNA polymerase II promoter7.69E-03
93GO:0010120: camalexin biosynthetic process7.69E-03
94GO:0030968: endoplasmic reticulum unfolded protein response7.69E-03
95GO:0009627: systemic acquired resistance7.84E-03
96GO:0006906: vesicle fusion7.84E-03
97GO:0009056: catabolic process8.73E-03
98GO:0015780: nucleotide-sugar transport8.73E-03
99GO:0019432: triglyceride biosynthetic process8.73E-03
100GO:0010112: regulation of systemic acquired resistance8.73E-03
101GO:0048589: developmental growth8.73E-03
102GO:0008219: cell death9.17E-03
103GO:1900426: positive regulation of defense response to bacterium9.82E-03
104GO:0043067: regulation of programmed cell death9.82E-03
105GO:0090332: stomatal closure9.82E-03
106GO:0010267: production of ta-siRNAs involved in RNA interference9.82E-03
107GO:0048268: clathrin coat assembly9.82E-03
108GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.82E-03
109GO:0008202: steroid metabolic process9.82E-03
110GO:0009407: toxin catabolic process1.01E-02
111GO:0010043: response to zinc ion1.06E-02
112GO:0043069: negative regulation of programmed cell death1.10E-02
113GO:0010629: negative regulation of gene expression1.10E-02
114GO:0000103: sulfate assimilation1.10E-02
115GO:0000724: double-strand break repair via homologous recombination1.11E-02
116GO:0010150: leaf senescence1.14E-02
117GO:0009089: lysine biosynthetic process via diaminopimelate1.21E-02
118GO:0009682: induced systemic resistance1.21E-02
119GO:0008361: regulation of cell size1.34E-02
120GO:0012501: programmed cell death1.34E-02
121GO:0016925: protein sumoylation1.34E-02
122GO:0006631: fatty acid metabolic process1.39E-02
123GO:0009617: response to bacterium1.42E-02
124GO:2000028: regulation of photoperiodism, flowering1.46E-02
125GO:0050826: response to freezing1.46E-02
126GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.46E-02
127GO:0010102: lateral root morphogenesis1.46E-02
128GO:0010628: positive regulation of gene expression1.46E-02
129GO:0002237: response to molecule of bacterial origin1.59E-02
130GO:0007034: vacuolar transport1.59E-02
131GO:0010053: root epidermal cell differentiation1.73E-02
132GO:0007030: Golgi organization1.73E-02
133GO:0010030: positive regulation of seed germination1.73E-02
134GO:0070588: calcium ion transmembrane transport1.73E-02
135GO:0006855: drug transmembrane transport1.76E-02
136GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.83E-02
137GO:0006071: glycerol metabolic process1.87E-02
138GO:0034976: response to endoplasmic reticulum stress1.87E-02
139GO:0006636: unsaturated fatty acid biosynthetic process1.87E-02
140GO:0009116: nucleoside metabolic process2.01E-02
141GO:0006289: nucleotide-excision repair2.01E-02
142GO:0006334: nucleosome assembly2.30E-02
143GO:0031408: oxylipin biosynthetic process2.30E-02
144GO:0009723: response to ethylene2.38E-02
145GO:2000022: regulation of jasmonic acid mediated signaling pathway2.46E-02
146GO:0030433: ubiquitin-dependent ERAD pathway2.46E-02
147GO:0009626: plant-type hypersensitive response2.57E-02
148GO:0009625: response to insect2.62E-02
149GO:0006012: galactose metabolic process2.62E-02
150GO:0010082: regulation of root meristem growth2.62E-02
151GO:0009620: response to fungus2.65E-02
152GO:0010584: pollen exine formation2.78E-02
153GO:0009306: protein secretion2.78E-02
154GO:0010118: stomatal movement3.11E-02
155GO:0042391: regulation of membrane potential3.11E-02
156GO:0008033: tRNA processing3.11E-02
157GO:0009960: endosperm development3.28E-02
158GO:0006662: glycerol ether metabolic process3.28E-02
159GO:0061025: membrane fusion3.45E-02
160GO:0042752: regulation of circadian rhythm3.45E-02
161GO:0048544: recognition of pollen3.45E-02
162GO:0006508: proteolysis3.57E-02
163GO:0009749: response to glucose3.63E-02
164GO:0000302: response to reactive oxygen species3.81E-02
165GO:0002229: defense response to oomycetes3.81E-02
166GO:0031047: gene silencing by RNA3.99E-02
167GO:0016032: viral process3.99E-02
168GO:1901657: glycosyl compound metabolic process4.17E-02
169GO:0030163: protein catabolic process4.17E-02
170GO:0009753: response to jasmonic acid4.58E-02
171GO:0008152: metabolic process4.73E-02
172GO:0009615: response to virus4.94E-02
173GO:0001666: response to hypoxia4.94E-02
RankGO TermAdjusted P value
1GO:0034338: short-chain carboxylesterase activity0.00E+00
2GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
3GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
4GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
5GO:0008734: L-aspartate oxidase activity0.00E+00
6GO:0051670: inulinase activity0.00E+00
7GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
8GO:0047844: deoxycytidine deaminase activity0.00E+00
9GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
10GO:0035252: UDP-xylosyltransferase activity1.92E-04
11GO:0102425: myricetin 3-O-glucosyltransferase activity3.37E-04
12GO:0102360: daphnetin 3-O-glucosyltransferase activity3.37E-04
13GO:0051669: fructan beta-fructosidase activity3.75E-04
14GO:1990381: ubiquitin-specific protease binding3.75E-04
15GO:0031219: levanase activity3.75E-04
16GO:0046481: digalactosyldiacylglycerol synthase activity3.75E-04
17GO:0010285: L,L-diaminopimelate aminotransferase activity3.75E-04
18GO:0050265: RNA uridylyltransferase activity3.75E-04
19GO:0047893: flavonol 3-O-glucosyltransferase activity4.22E-04
20GO:0080045: quercetin 3'-O-glucosyltransferase activity8.15E-04
21GO:0050291: sphingosine N-acyltransferase activity8.15E-04
22GO:0004809: tRNA (guanine-N2-)-methyltransferase activity8.15E-04
23GO:0008805: carbon-monoxide oxygenase activity8.15E-04
24GO:0004338: glucan exo-1,3-beta-glucosidase activity8.15E-04
25GO:0015117: thiosulfate transmembrane transporter activity8.15E-04
26GO:1901677: phosphate transmembrane transporter activity8.15E-04
27GO:0048531: beta-1,3-galactosyltransferase activity8.15E-04
28GO:0008378: galactosyltransferase activity1.12E-03
29GO:0005457: GDP-fucose transmembrane transporter activity1.32E-03
30GO:0000030: mannosyltransferase activity1.32E-03
31GO:0005310: dicarboxylic acid transmembrane transporter activity1.32E-03
32GO:0015141: succinate transmembrane transporter activity1.32E-03
33GO:0017077: oxidative phosphorylation uncoupler activity1.91E-03
34GO:0004749: ribose phosphate diphosphokinase activity1.91E-03
35GO:0019201: nucleotide kinase activity1.91E-03
36GO:0015131: oxaloacetate transmembrane transporter activity1.91E-03
37GO:0035529: NADH pyrophosphatase activity1.91E-03
38GO:0035250: UDP-galactosyltransferase activity1.91E-03
39GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.91E-03
40GO:0010178: IAA-amino acid conjugate hydrolase activity1.91E-03
41GO:0035251: UDP-glucosyltransferase activity2.39E-03
42GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway2.56E-03
43GO:0001075: transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly2.56E-03
44GO:0008194: UDP-glycosyltransferase activity2.88E-03
45GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.28E-03
46GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.28E-03
47GO:0004623: phospholipase A2 activity3.28E-03
48GO:0031386: protein tag3.28E-03
49GO:0047631: ADP-ribose diphosphatase activity3.28E-03
50GO:0008474: palmitoyl-(protein) hydrolase activity4.05E-03
51GO:0000210: NAD+ diphosphatase activity4.05E-03
52GO:0004126: cytidine deaminase activity4.88E-03
53GO:0004017: adenylate kinase activity4.88E-03
54GO:0004012: phospholipid-translocating ATPase activity4.88E-03
55GO:0003730: mRNA 3'-UTR binding4.88E-03
56GO:0005261: cation channel activity4.88E-03
57GO:0004144: diacylglycerol O-acyltransferase activity4.88E-03
58GO:0004656: procollagen-proline 4-dioxygenase activity4.88E-03
59GO:0008235: metalloexopeptidase activity5.77E-03
60GO:0016621: cinnamoyl-CoA reductase activity5.77E-03
61GO:0003872: 6-phosphofructokinase activity5.77E-03
62GO:0015140: malate transmembrane transporter activity5.77E-03
63GO:0004620: phospholipase activity5.77E-03
64GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity6.24E-03
65GO:0004034: aldose 1-epimerase activity6.70E-03
66GO:0004525: ribonuclease III activity6.70E-03
67GO:0004708: MAP kinase kinase activity6.70E-03
68GO:0016758: transferase activity, transferring hexosyl groups7.28E-03
69GO:0008142: oxysterol binding7.69E-03
70GO:0004630: phospholipase D activity7.69E-03
71GO:0005267: potassium channel activity7.69E-03
72GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity7.69E-03
73GO:0008375: acetylglucosaminyltransferase activity7.84E-03
74GO:0016757: transferase activity, transferring glycosyl groups7.99E-03
75GO:0016301: kinase activity8.20E-03
76GO:0004222: metalloendopeptidase activity1.01E-02
77GO:0015297: antiporter activity1.07E-02
78GO:0030234: enzyme regulator activity1.10E-02
79GO:0004568: chitinase activity1.10E-02
80GO:0005545: 1-phosphatidylinositol binding1.10E-02
81GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.17E-02
82GO:0004177: aminopeptidase activity1.21E-02
83GO:0008559: xenobiotic-transporting ATPase activity1.21E-02
84GO:0047372: acylglycerol lipase activity1.21E-02
85GO:0000149: SNARE binding1.27E-02
86GO:0015116: sulfate transmembrane transporter activity1.34E-02
87GO:0000049: tRNA binding1.34E-02
88GO:0004364: glutathione transferase activity1.45E-02
89GO:0005388: calcium-transporting ATPase activity1.46E-02
90GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.46E-02
91GO:0005484: SNAP receptor activity1.51E-02
92GO:0031624: ubiquitin conjugating enzyme binding1.59E-02
93GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.59E-02
94GO:0030552: cAMP binding1.73E-02
95GO:0004867: serine-type endopeptidase inhibitor activity1.73E-02
96GO:0030553: cGMP binding1.73E-02
97GO:0003712: transcription cofactor activity1.73E-02
98GO:0004842: ubiquitin-protein transferase activity1.87E-02
99GO:0031418: L-ascorbic acid binding2.01E-02
100GO:0008134: transcription factor binding2.01E-02
101GO:0016298: lipase activity2.11E-02
102GO:0005216: ion channel activity2.15E-02
103GO:0043531: ADP binding2.22E-02
104GO:0031625: ubiquitin protein ligase binding2.25E-02
105GO:0016779: nucleotidyltransferase activity2.46E-02
106GO:0004497: monooxygenase activity2.59E-02
107GO:0008810: cellulase activity2.62E-02
108GO:0080043: quercetin 3-O-glucosyltransferase activity2.65E-02
109GO:0080044: quercetin 7-O-glucosyltransferase activity2.65E-02
110GO:0022857: transmembrane transporter activity2.73E-02
111GO:0003756: protein disulfide isomerase activity2.78E-02
112GO:0004499: N,N-dimethylaniline monooxygenase activity2.78E-02
113GO:0051082: unfolded protein binding2.90E-02
114GO:0047134: protein-disulfide reductase activity2.94E-02
115GO:0005102: receptor binding2.94E-02
116GO:0005249: voltage-gated potassium channel activity3.11E-02
117GO:0030551: cyclic nucleotide binding3.11E-02
118GO:0003713: transcription coactivator activity3.28E-02
119GO:0030276: clathrin binding3.28E-02
120GO:0004791: thioredoxin-disulfide reductase activity3.45E-02
121GO:0016853: isomerase activity3.45E-02
122GO:0005524: ATP binding3.45E-02
123GO:0010181: FMN binding3.45E-02
124GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.57E-02
125GO:0004252: serine-type endopeptidase activity4.02E-02
126GO:0030170: pyridoxal phosphate binding4.02E-02
127GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.17E-02
128GO:0000156: phosphorelay response regulator activity4.17E-02
129GO:0030246: carbohydrate binding4.29E-02
130GO:0016491: oxidoreductase activity4.50E-02
131GO:0008483: transaminase activity4.55E-02
132GO:0008237: metallopeptidase activity4.55E-02
133GO:0051213: dioxygenase activity4.94E-02
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Gene type



Gene DE type