co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G62700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042407: cristae formation	0.00E+00
2	GO:0017038: protein import	0.00E+00
3	GO:0046460: neutral lipid biosynthetic process	0.00E+00
4	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
5	GO:0015882: L-ascorbic acid transport	0.00E+00
6	GO:0090279: regulation of calcium ion import	0.00E+00
7	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
8	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
9	GO:0042817: pyridoxal metabolic process	0.00E+00
10	GO:0008618: 7-methylguanosine metabolic process	0.00E+00
11	GO:0071474: cellular hyperosmotic response	0.00E+00
12	GO:0010157: response to chlorate	0.00E+00
13	GO:0006399: tRNA metabolic process	0.00E+00
14	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
15	GO:0070125: mitochondrial translational elongation	0.00E+00
16	GO:0036265: RNA (guanine-N7)-methylation	0.00E+00
17	GO:0007154: cell communication	2.06E-06
18	GO:0006400: tRNA modification	2.09E-06
19	GO:0009793: embryo development ending in seed dormancy	1.52E-05
20	GO:0015995: chlorophyll biosynthetic process	2.89E-05
21	GO:0045038: protein import into chloroplast thylakoid membrane	5.09E-05
22	GO:0030488: tRNA methylation	1.04E-04
23	GO:2000070: regulation of response to water deprivation	1.76E-04
24	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	2.09E-04
25	GO:0043266: regulation of potassium ion transport	2.09E-04
26	GO:0006659: phosphatidylserine biosynthetic process	2.09E-04
27	GO:0043087: regulation of GTPase activity	2.09E-04
28	GO:2000021: regulation of ion homeostasis	2.09E-04
29	GO:1902458: positive regulation of stomatal opening	2.09E-04
30	GO:0010028: xanthophyll cycle	2.09E-04
31	GO:0000023: maltose metabolic process	2.09E-04
32	GO:0006419: alanyl-tRNA aminoacylation	2.09E-04
33	GO:0071482: cellular response to light stimulus	2.19E-04
34	GO:1900865: chloroplast RNA modification	3.16E-04
35	GO:0006782: protoporphyrinogen IX biosynthetic process	3.71E-04
36	GO:0006352: DNA-templated transcription, initiation	4.29E-04
37	GO:0006739: NADP metabolic process	4.66E-04
38	GO:0009629: response to gravity	4.66E-04
39	GO:0080005: photosystem stoichiometry adjustment	4.66E-04
40	GO:0006423: cysteinyl-tRNA aminoacylation	4.66E-04
41	GO:0006435: threonyl-tRNA aminoacylation	4.66E-04
42	GO:0018026: peptidyl-lysine monomethylation	4.66E-04
43	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	4.66E-04
44	GO:0042550: photosystem I stabilization	4.66E-04
45	GO:1903426: regulation of reactive oxygen species biosynthetic process	4.66E-04
46	GO:0051262: protein tetramerization	4.66E-04
47	GO:0005983: starch catabolic process	4.92E-04
48	GO:0045037: protein import into chloroplast stroma	4.92E-04
49	GO:0033591: response to L-ascorbic acid	7.59E-04
50	GO:0031022: nuclear migration along microfilament	7.59E-04
51	GO:0019419: sulfate reduction	7.59E-04
52	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	7.59E-04
53	GO:0034051: negative regulation of plant-type hypersensitive response	7.59E-04
54	GO:0001578: microtubule bundle formation	7.59E-04
55	GO:0045493: xylan catabolic process	7.59E-04
56	GO:2001295: malonyl-CoA biosynthetic process	7.59E-04
57	GO:0030261: chromosome condensation	7.59E-04
58	GO:0000913: preprophase band assembly	7.59E-04
59	GO:0006164: purine nucleotide biosynthetic process	1.08E-03
60	GO:0008615: pyridoxine biosynthetic process	1.08E-03
61	GO:2001141: regulation of RNA biosynthetic process	1.08E-03
62	GO:0009102: biotin biosynthetic process	1.08E-03
63	GO:1901000: regulation of response to salt stress	1.08E-03
64	GO:0009658: chloroplast organization	1.27E-03
65	GO:0051322: anaphase	1.44E-03
66	GO:0010107: potassium ion import	1.44E-03
67	GO:0007020: microtubule nucleation	1.44E-03
68	GO:0006021: inositol biosynthetic process	1.44E-03
69	GO:0071483: cellular response to blue light	1.44E-03
70	GO:0006734: NADH metabolic process	1.44E-03
71	GO:0010109: regulation of photosynthesis	1.44E-03
72	GO:0046785: microtubule polymerization	1.83E-03
73	GO:0098719: sodium ion import across plasma membrane	1.83E-03
74	GO:0009904: chloroplast accumulation movement	1.83E-03
75	GO:0016032: viral process	2.21E-03
76	GO:0016554: cytidine to uridine editing	2.26E-03
77	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.26E-03
78	GO:0010190: cytochrome b6f complex assembly	2.26E-03
79	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.26E-03
80	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.26E-03
81	GO:0034389: lipid particle organization	2.71E-03
82	GO:0009903: chloroplast avoidance movement	2.71E-03
83	GO:0000910: cytokinesis	2.82E-03
84	GO:0016126: sterol biosynthetic process	2.98E-03
85	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.20E-03
86	GO:0010196: nonphotochemical quenching	3.20E-03
87	GO:0048528: post-embryonic root development	3.20E-03
88	GO:0009409: response to cold	3.31E-03
89	GO:0006605: protein targeting	3.71E-03
90	GO:0019375: galactolipid biosynthetic process	3.71E-03
91	GO:0009704: de-etiolation	3.71E-03
92	GO:0055075: potassium ion homeostasis	3.71E-03
93	GO:0022900: electron transport chain	4.24E-03
94	GO:0009932: cell tip growth	4.24E-03
95	GO:0019432: triglyceride biosynthetic process	4.80E-03
96	GO:0010206: photosystem II repair	4.80E-03
97	GO:0090333: regulation of stomatal closure	4.80E-03
98	GO:0006783: heme biosynthetic process	4.80E-03
99	GO:0098656: anion transmembrane transport	4.80E-03
100	GO:0043067: regulation of programmed cell death	5.38E-03
101	GO:0006779: porphyrin-containing compound biosynthetic process	5.38E-03
102	GO:0051453: regulation of intracellular pH	5.38E-03
103	GO:0005982: starch metabolic process	5.38E-03
104	GO:0000103: sulfate assimilation	5.99E-03
105	GO:0045036: protein targeting to chloroplast	5.99E-03
106	GO:0006949: syncytium formation	5.99E-03
107	GO:0019684: photosynthesis, light reaction	6.62E-03
108	GO:0009089: lysine biosynthetic process via diaminopimelate	6.62E-03
109	GO:1903507: negative regulation of nucleic acid-templated transcription	6.62E-03
110	GO:0018119: peptidyl-cysteine S-nitrosylation	6.62E-03
111	GO:0010015: root morphogenesis	6.62E-03
112	GO:0050826: response to freezing	7.96E-03
113	GO:0010020: chloroplast fission	8.66E-03
114	GO:0010207: photosystem II assembly	8.66E-03
115	GO:0090351: seedling development	9.37E-03
116	GO:0006071: glycerol metabolic process	1.01E-02
117	GO:0019344: cysteine biosynthetic process	1.09E-02
118	GO:0008299: isoprenoid biosynthetic process	1.17E-02
119	GO:0043622: cortical microtubule organization	1.17E-02
120	GO:0007017: microtubule-based process	1.17E-02
121	GO:0009768: photosynthesis, light harvesting in photosystem I	1.17E-02
122	GO:0031408: oxylipin biosynthetic process	1.25E-02
123	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.33E-02
124	GO:0019748: secondary metabolic process	1.33E-02
125	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.41E-02
126	GO:0009306: protein secretion	1.50E-02
127	GO:0051028: mRNA transport	1.59E-02
128	GO:0006885: regulation of pH	1.77E-02
129	GO:0010197: polar nucleus fusion	1.77E-02
130	GO:0009741: response to brassinosteroid	1.77E-02
131	GO:0007018: microtubule-based movement	1.86E-02
132	GO:0006814: sodium ion transport	1.86E-02
133	GO:0009646: response to absence of light	1.86E-02
134	GO:0006633: fatty acid biosynthetic process	1.92E-02
135	GO:0009791: post-embryonic development	1.96E-02
136	GO:0010183: pollen tube guidance	1.96E-02
137	GO:0008654: phospholipid biosynthetic process	1.96E-02
138	GO:0010228: vegetative to reproductive phase transition of meristem	2.21E-02
139	GO:0030163: protein catabolic process	2.25E-02
140	GO:0010090: trichome morphogenesis	2.25E-02
141	GO:0009828: plant-type cell wall loosening	2.36E-02
142	GO:0071805: potassium ion transmembrane transport	2.46E-02
143	GO:0008380: RNA splicing	2.52E-02
144	GO:0010027: thylakoid membrane organization	2.67E-02
145	GO:0009627: systemic acquired resistance	2.89E-02
146	GO:0009416: response to light stimulus	2.94E-02
147	GO:0010411: xyloglucan metabolic process	3.00E-02
148	GO:0018298: protein-chromophore linkage	3.23E-02
149	GO:0006499: N-terminal protein myristoylation	3.46E-02
150	GO:0009867: jasmonic acid mediated signaling pathway	3.82E-02
151	GO:0045087: innate immune response	3.82E-02
152	GO:0009637: response to blue light	3.82E-02
153	GO:0006457: protein folding	4.04E-02
154	GO:0080167: response to karrikin	4.04E-02
155	GO:0005975: carbohydrate metabolic process	4.05E-02
156	GO:0046777: protein autophosphorylation	4.32E-02
157	GO:0008283: cell proliferation	4.57E-02
158	GO:0010114: response to red light	4.57E-02
159	GO:0015979: photosynthesis	4.61E-02
160	GO:0045454: cell redox homeostasis	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0005363: maltose transmembrane transporter activity	0.00E+00
2	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
3	GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity	0.00E+00
4	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
5	GO:0050613: delta14-sterol reductase activity	0.00E+00
6	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
7	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
8	GO:0036033: mediator complex binding	0.00E+00
9	GO:0008176: tRNA (guanine-N7-)-methyltransferase activity	0.00E+00
10	GO:0005048: signal sequence binding	0.00E+00
11	GO:0004076: biotin synthase activity	0.00E+00
12	GO:0003937: IMP cyclohydrolase activity	0.00E+00
13	GO:0016851: magnesium chelatase activity	1.73E-05
14	GO:0016987: sigma factor activity	3.17E-05
15	GO:0001053: plastid sigma factor activity	3.17E-05
16	GO:0005525: GTP binding	6.13E-05
17	GO:0004813: alanine-tRNA ligase activity	2.09E-04
18	GO:0004853: uroporphyrinogen decarboxylase activity	2.09E-04
19	GO:0052856: NADHX epimerase activity	2.09E-04
20	GO:0046481: digalactosyldiacylglycerol synthase activity	2.09E-04
21	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.09E-04
22	GO:0052857: NADPHX epimerase activity	2.09E-04
23	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	2.09E-04
24	GO:0046480: galactolipid galactosyltransferase activity	2.09E-04
25	GO:0005227: calcium activated cation channel activity	2.09E-04
26	GO:0004733: pyridoxamine-phosphate oxidase activity	2.09E-04
27	GO:0004817: cysteine-tRNA ligase activity	4.66E-04
28	GO:0009973: adenylyl-sulfate reductase activity	4.66E-04
29	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	4.66E-04
30	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.66E-04
31	GO:0004512: inositol-3-phosphate synthase activity	4.66E-04
32	GO:0004829: threonine-tRNA ligase activity	4.66E-04
33	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	4.66E-04
34	GO:0009977: proton motive force dependent protein transmembrane transporter activity	4.66E-04
35	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	4.66E-04
36	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.29E-04
37	GO:0003913: DNA photolyase activity	7.59E-04
38	GO:0070402: NADPH binding	7.59E-04
39	GO:0015462: ATPase-coupled protein transmembrane transporter activity	7.59E-04
40	GO:0000254: C-4 methylsterol oxidase activity	1.08E-03
41	GO:0035250: UDP-galactosyltransferase activity	1.08E-03
42	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.08E-03
43	GO:0009044: xylan 1,4-beta-xylosidase activity	1.44E-03
44	GO:0046556: alpha-L-arabinofuranosidase activity	1.44E-03
45	GO:0016279: protein-lysine N-methyltransferase activity	1.44E-03
46	GO:0003989: acetyl-CoA carboxylase activity	1.83E-03
47	GO:0042578: phosphoric ester hydrolase activity	2.26E-03
48	GO:0015081: sodium ion transmembrane transporter activity	2.26E-03
49	GO:2001070: starch binding	2.26E-03
50	GO:0016832: aldehyde-lyase activity	2.71E-03
51	GO:0005261: cation channel activity	2.71E-03
52	GO:0004144: diacylglycerol O-acyltransferase activity	2.71E-03
53	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.71E-03
54	GO:0003924: GTPase activity	3.19E-03
55	GO:0009881: photoreceptor activity	3.20E-03
56	GO:0008312: 7S RNA binding	3.71E-03
57	GO:0043022: ribosome binding	3.71E-03
58	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.48E-03
59	GO:0051539: 4 iron, 4 sulfur cluster binding	5.60E-03
60	GO:0015386: potassium:proton antiporter activity	6.62E-03
61	GO:0051537: 2 iron, 2 sulfur cluster binding	6.85E-03
62	GO:0000049: tRNA binding	7.28E-03
63	GO:0005315: inorganic phosphate transmembrane transporter activity	7.96E-03
64	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	8.54E-03
65	GO:0008266: poly(U) RNA binding	8.66E-03
66	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.01E-02
67	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.01E-02
68	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.01E-02
69	GO:0031409: pigment binding	1.01E-02
70	GO:0003714: transcription corepressor activity	1.09E-02
71	GO:0051536: iron-sulfur cluster binding	1.09E-02
72	GO:0015079: potassium ion transmembrane transporter activity	1.17E-02
73	GO:0003729: mRNA binding	1.29E-02
74	GO:0030570: pectate lyase activity	1.41E-02
75	GO:0008514: organic anion transmembrane transporter activity	1.50E-02
76	GO:0004252: serine-type endopeptidase activity	1.70E-02
77	GO:0008536: Ran GTPase binding	1.77E-02
78	GO:0010181: FMN binding	1.86E-02
79	GO:0016853: isomerase activity	1.86E-02
80	GO:0008017: microtubule binding	2.21E-02
81	GO:0015385: sodium:proton antiporter activity	2.25E-02
82	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.25E-02
83	GO:0008483: transaminase activity	2.46E-02
84	GO:0005200: structural constituent of cytoskeleton	2.46E-02
85	GO:0016597: amino acid binding	2.57E-02
86	GO:0016168: chlorophyll binding	2.78E-02
87	GO:0030247: polysaccharide binding	3.00E-02
88	GO:0008236: serine-type peptidase activity	3.11E-02
89	GO:0015238: drug transmembrane transporter activity	3.34E-02
90	GO:0005096: GTPase activator activity	3.34E-02
91	GO:0030145: manganese ion binding	3.58E-02
92	GO:0050660: flavin adenine dinucleotide binding	3.78E-02
93	GO:0003746: translation elongation factor activity	3.82E-02
94	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.82E-02
95	GO:0003993: acid phosphatase activity	3.94E-02
96	GO:0003723: RNA binding	4.04E-02
97	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.14E-02
98	GO:0052689: carboxylic ester hydrolase activity	4.46E-02
99	GO:0004185: serine-type carboxypeptidase activity	4.57E-02
100	GO:0043621: protein self-association	4.84E-02
101	GO:0035091: phosphatidylinositol binding	4.84E-02