GO Enrichment Analysis of Co-expressed Genes with
AT3G62000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:2000469: negative regulation of peroxidase activity | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 5 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 6 | GO:0006573: valine metabolic process | 0.00E+00 |
| 7 | GO:0090697: post-embryonic plant organ morphogenesis | 0.00E+00 |
| 8 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.73E-04 |
| 9 | GO:0043007: maintenance of rDNA | 1.73E-04 |
| 10 | GO:1902458: positive regulation of stomatal opening | 1.73E-04 |
| 11 | GO:1902334: fructose export from vacuole to cytoplasm | 1.73E-04 |
| 12 | GO:0010362: negative regulation of anion channel activity by blue light | 1.73E-04 |
| 13 | GO:0015969: guanosine tetraphosphate metabolic process | 1.73E-04 |
| 14 | GO:0031426: polycistronic mRNA processing | 1.73E-04 |
| 15 | GO:0006551: leucine metabolic process | 1.73E-04 |
| 16 | GO:0071461: cellular response to redox state | 1.73E-04 |
| 17 | GO:0048527: lateral root development | 3.90E-04 |
| 18 | GO:0010155: regulation of proton transport | 3.92E-04 |
| 19 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.92E-04 |
| 20 | GO:0015790: UDP-xylose transport | 3.92E-04 |
| 21 | GO:0006650: glycerophospholipid metabolic process | 3.92E-04 |
| 22 | GO:0080005: photosystem stoichiometry adjustment | 3.92E-04 |
| 23 | GO:0010541: acropetal auxin transport | 3.92E-04 |
| 24 | GO:0010143: cutin biosynthetic process | 4.87E-04 |
| 25 | GO:0055114: oxidation-reduction process | 4.90E-04 |
| 26 | GO:0046168: glycerol-3-phosphate catabolic process | 6.40E-04 |
| 27 | GO:0010160: formation of animal organ boundary | 6.40E-04 |
| 28 | GO:0010239: chloroplast mRNA processing | 9.13E-04 |
| 29 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 9.13E-04 |
| 30 | GO:0006072: glycerol-3-phosphate metabolic process | 9.13E-04 |
| 31 | GO:1990019: protein storage vacuole organization | 9.13E-04 |
| 32 | GO:2001141: regulation of RNA biosynthetic process | 9.13E-04 |
| 33 | GO:0048443: stamen development | 1.04E-03 |
| 34 | GO:0048442: sepal development | 1.21E-03 |
| 35 | GO:0008295: spermidine biosynthetic process | 1.21E-03 |
| 36 | GO:0032366: intracellular sterol transport | 1.21E-03 |
| 37 | GO:0031122: cytoplasmic microtubule organization | 1.21E-03 |
| 38 | GO:0006021: inositol biosynthetic process | 1.21E-03 |
| 39 | GO:1902183: regulation of shoot apical meristem development | 1.54E-03 |
| 40 | GO:0010158: abaxial cell fate specification | 1.54E-03 |
| 41 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.54E-03 |
| 42 | GO:0009904: chloroplast accumulation movement | 1.54E-03 |
| 43 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.54E-03 |
| 44 | GO:0046855: inositol phosphate dephosphorylation | 1.89E-03 |
| 45 | GO:0060918: auxin transport | 1.89E-03 |
| 46 | GO:0009643: photosynthetic acclimation | 1.89E-03 |
| 47 | GO:0010076: maintenance of floral meristem identity | 2.27E-03 |
| 48 | GO:0009082: branched-chain amino acid biosynthetic process | 2.27E-03 |
| 49 | GO:0009099: valine biosynthetic process | 2.27E-03 |
| 50 | GO:0009903: chloroplast avoidance movement | 2.27E-03 |
| 51 | GO:0009854: oxidative photosynthetic carbon pathway | 2.27E-03 |
| 52 | GO:0010019: chloroplast-nucleus signaling pathway | 2.27E-03 |
| 53 | GO:1900056: negative regulation of leaf senescence | 2.67E-03 |
| 54 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 2.67E-03 |
| 55 | GO:0030307: positive regulation of cell growth | 2.67E-03 |
| 56 | GO:0015995: chlorophyll biosynthetic process | 2.70E-03 |
| 57 | GO:0009231: riboflavin biosynthetic process | 3.09E-03 |
| 58 | GO:0016559: peroxisome fission | 3.09E-03 |
| 59 | GO:0007155: cell adhesion | 3.09E-03 |
| 60 | GO:0043068: positive regulation of programmed cell death | 3.09E-03 |
| 61 | GO:2000070: regulation of response to water deprivation | 3.09E-03 |
| 62 | GO:0006811: ion transport | 3.29E-03 |
| 63 | GO:0009932: cell tip growth | 3.54E-03 |
| 64 | GO:0071482: cellular response to light stimulus | 3.54E-03 |
| 65 | GO:0015996: chlorophyll catabolic process | 3.54E-03 |
| 66 | GO:0007186: G-protein coupled receptor signaling pathway | 3.54E-03 |
| 67 | GO:0009097: isoleucine biosynthetic process | 3.54E-03 |
| 68 | GO:0009637: response to blue light | 3.78E-03 |
| 69 | GO:0048507: meristem development | 4.00E-03 |
| 70 | GO:2000024: regulation of leaf development | 4.00E-03 |
| 71 | GO:0009638: phototropism | 4.49E-03 |
| 72 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 4.49E-03 |
| 73 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.49E-03 |
| 74 | GO:0009641: shade avoidance | 4.99E-03 |
| 75 | GO:0010192: mucilage biosynthetic process | 4.99E-03 |
| 76 | GO:0006995: cellular response to nitrogen starvation | 4.99E-03 |
| 77 | GO:0019538: protein metabolic process | 4.99E-03 |
| 78 | GO:0048441: petal development | 4.99E-03 |
| 79 | GO:0043069: negative regulation of programmed cell death | 4.99E-03 |
| 80 | GO:0008643: carbohydrate transport | 5.26E-03 |
| 81 | GO:0000038: very long-chain fatty acid metabolic process | 5.52E-03 |
| 82 | GO:0043085: positive regulation of catalytic activity | 5.52E-03 |
| 83 | GO:0006352: DNA-templated transcription, initiation | 5.52E-03 |
| 84 | GO:0009750: response to fructose | 5.52E-03 |
| 85 | GO:0008361: regulation of cell size | 6.06E-03 |
| 86 | GO:0006790: sulfur compound metabolic process | 6.06E-03 |
| 87 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.06E-03 |
| 88 | GO:0045037: protein import into chloroplast stroma | 6.06E-03 |
| 89 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.61E-03 |
| 90 | GO:0009767: photosynthetic electron transport chain | 6.61E-03 |
| 91 | GO:0009785: blue light signaling pathway | 6.61E-03 |
| 92 | GO:0030048: actin filament-based movement | 6.61E-03 |
| 93 | GO:0044550: secondary metabolite biosynthetic process | 6.90E-03 |
| 94 | GO:0006857: oligopeptide transport | 7.01E-03 |
| 95 | GO:0009887: animal organ morphogenesis | 7.20E-03 |
| 96 | GO:0010540: basipetal auxin transport | 7.20E-03 |
| 97 | GO:0048440: carpel development | 7.20E-03 |
| 98 | GO:0010020: chloroplast fission | 7.20E-03 |
| 99 | GO:0010207: photosystem II assembly | 7.20E-03 |
| 100 | GO:0010223: secondary shoot formation | 7.20E-03 |
| 101 | GO:0042343: indole glucosinolate metabolic process | 7.79E-03 |
| 102 | GO:0019853: L-ascorbic acid biosynthetic process | 7.79E-03 |
| 103 | GO:0046854: phosphatidylinositol phosphorylation | 7.79E-03 |
| 104 | GO:0006863: purine nucleobase transport | 8.41E-03 |
| 105 | GO:0000027: ribosomal large subunit assembly | 9.03E-03 |
| 106 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.03E-03 |
| 107 | GO:0007017: microtubule-based process | 9.69E-03 |
| 108 | GO:0051260: protein homooligomerization | 1.03E-02 |
| 109 | GO:0098542: defense response to other organism | 1.03E-02 |
| 110 | GO:0019915: lipid storage | 1.03E-02 |
| 111 | GO:0019748: secondary metabolic process | 1.10E-02 |
| 112 | GO:0009814: defense response, incompatible interaction | 1.10E-02 |
| 113 | GO:0071215: cellular response to abscisic acid stimulus | 1.17E-02 |
| 114 | GO:0009294: DNA mediated transformation | 1.17E-02 |
| 115 | GO:0071369: cellular response to ethylene stimulus | 1.17E-02 |
| 116 | GO:0019722: calcium-mediated signaling | 1.24E-02 |
| 117 | GO:0042744: hydrogen peroxide catabolic process | 1.33E-02 |
| 118 | GO:0045489: pectin biosynthetic process | 1.47E-02 |
| 119 | GO:0010154: fruit development | 1.47E-02 |
| 120 | GO:0009958: positive gravitropism | 1.47E-02 |
| 121 | GO:0006520: cellular amino acid metabolic process | 1.47E-02 |
| 122 | GO:0010182: sugar mediated signaling pathway | 1.47E-02 |
| 123 | GO:0009646: response to absence of light | 1.54E-02 |
| 124 | GO:0009791: post-embryonic development | 1.62E-02 |
| 125 | GO:0007623: circadian rhythm | 1.62E-02 |
| 126 | GO:0009749: response to glucose | 1.62E-02 |
| 127 | GO:0008654: phospholipid biosynthetic process | 1.62E-02 |
| 128 | GO:0007264: small GTPase mediated signal transduction | 1.78E-02 |
| 129 | GO:0010252: auxin homeostasis | 1.95E-02 |
| 130 | GO:0009639: response to red or far red light | 1.95E-02 |
| 131 | GO:0007267: cell-cell signaling | 2.04E-02 |
| 132 | GO:0010027: thylakoid membrane organization | 2.21E-02 |
| 133 | GO:0045893: positive regulation of transcription, DNA-templated | 2.51E-02 |
| 134 | GO:0030244: cellulose biosynthetic process | 2.67E-02 |
| 135 | GO:0018298: protein-chromophore linkage | 2.67E-02 |
| 136 | GO:0000160: phosphorelay signal transduction system | 2.77E-02 |
| 137 | GO:0009407: toxin catabolic process | 2.87E-02 |
| 138 | GO:0010218: response to far red light | 2.87E-02 |
| 139 | GO:0007568: aging | 2.96E-02 |
| 140 | GO:0009910: negative regulation of flower development | 2.96E-02 |
| 141 | GO:0010119: regulation of stomatal movement | 2.96E-02 |
| 142 | GO:0009853: photorespiration | 3.16E-02 |
| 143 | GO:0009744: response to sucrose | 3.79E-02 |
| 144 | GO:0009640: photomorphogenesis | 3.79E-02 |
| 145 | GO:0009926: auxin polar transport | 3.79E-02 |
| 146 | GO:0042546: cell wall biogenesis | 3.90E-02 |
| 147 | GO:0009636: response to toxic substance | 4.12E-02 |
| 148 | GO:0000165: MAPK cascade | 4.34E-02 |
| 149 | GO:0009664: plant-type cell wall organization | 4.45E-02 |
| 150 | GO:0042538: hyperosmotic salinity response | 4.45E-02 |
| 151 | GO:0006281: DNA repair | 4.57E-02 |
| 152 | GO:0006629: lipid metabolic process | 4.57E-02 |
| 153 | GO:0006813: potassium ion transport | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 2 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 3 | GO:0016491: oxidoreductase activity | 2.04E-05 |
| 4 | GO:0000293: ferric-chelate reductase activity | 5.54E-05 |
| 5 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 1.73E-04 |
| 6 | GO:0046906: tetrapyrrole binding | 1.73E-04 |
| 7 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 1.73E-04 |
| 8 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.73E-04 |
| 9 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.73E-04 |
| 10 | GO:0008568: microtubule-severing ATPase activity | 1.73E-04 |
| 11 | GO:0016618: hydroxypyruvate reductase activity | 1.73E-04 |
| 12 | GO:0003984: acetolactate synthase activity | 1.73E-04 |
| 13 | GO:0004328: formamidase activity | 1.73E-04 |
| 14 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 3.92E-04 |
| 15 | GO:0004766: spermidine synthase activity | 3.92E-04 |
| 16 | GO:0052832: inositol monophosphate 3-phosphatase activity | 3.92E-04 |
| 17 | GO:0008934: inositol monophosphate 1-phosphatase activity | 3.92E-04 |
| 18 | GO:0052833: inositol monophosphate 4-phosphatase activity | 3.92E-04 |
| 19 | GO:0005464: UDP-xylose transmembrane transporter activity | 3.92E-04 |
| 20 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.92E-04 |
| 21 | GO:0005353: fructose transmembrane transporter activity | 3.92E-04 |
| 22 | GO:0008728: GTP diphosphokinase activity | 3.92E-04 |
| 23 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 3.92E-04 |
| 24 | GO:0050734: hydroxycinnamoyltransferase activity | 6.40E-04 |
| 25 | GO:0003913: DNA photolyase activity | 6.40E-04 |
| 26 | GO:0003935: GTP cyclohydrolase II activity | 6.40E-04 |
| 27 | GO:0030267: glyoxylate reductase (NADP) activity | 6.40E-04 |
| 28 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.40E-04 |
| 29 | GO:0048027: mRNA 5'-UTR binding | 9.13E-04 |
| 30 | GO:0022890: inorganic cation transmembrane transporter activity | 9.13E-04 |
| 31 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.13E-04 |
| 32 | GO:0009882: blue light photoreceptor activity | 9.13E-04 |
| 33 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.12E-03 |
| 34 | GO:0001053: plastid sigma factor activity | 1.21E-03 |
| 35 | GO:0016987: sigma factor activity | 1.21E-03 |
| 36 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.54E-03 |
| 37 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.89E-03 |
| 38 | GO:0035673: oligopeptide transmembrane transporter activity | 1.89E-03 |
| 39 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.89E-03 |
| 40 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.89E-03 |
| 41 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.27E-03 |
| 42 | GO:0051753: mannan synthase activity | 2.27E-03 |
| 43 | GO:0004602: glutathione peroxidase activity | 2.27E-03 |
| 44 | GO:0019899: enzyme binding | 2.67E-03 |
| 45 | GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity | 3.54E-03 |
| 46 | GO:0103095: wax ester synthase activity | 3.54E-03 |
| 47 | GO:0015386: potassium:proton antiporter activity | 5.52E-03 |
| 48 | GO:0008515: sucrose transmembrane transporter activity | 5.52E-03 |
| 49 | GO:0051287: NAD binding | 5.89E-03 |
| 50 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 6.06E-03 |
| 51 | GO:0015198: oligopeptide transporter activity | 6.06E-03 |
| 52 | GO:0000155: phosphorelay sensor kinase activity | 6.61E-03 |
| 53 | GO:0004565: beta-galactosidase activity | 6.61E-03 |
| 54 | GO:0010329: auxin efflux transmembrane transporter activity | 6.61E-03 |
| 55 | GO:0008081: phosphoric diester hydrolase activity | 6.61E-03 |
| 56 | GO:0003774: motor activity | 7.20E-03 |
| 57 | GO:0008146: sulfotransferase activity | 7.79E-03 |
| 58 | GO:0051119: sugar transmembrane transporter activity | 7.79E-03 |
| 59 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 8.60E-03 |
| 60 | GO:0020037: heme binding | 9.00E-03 |
| 61 | GO:0016746: transferase activity, transferring acyl groups | 9.61E-03 |
| 62 | GO:0005345: purine nucleobase transmembrane transporter activity | 9.69E-03 |
| 63 | GO:0015079: potassium ion transmembrane transporter activity | 9.69E-03 |
| 64 | GO:0005525: GTP binding | 1.08E-02 |
| 65 | GO:0030570: pectate lyase activity | 1.17E-02 |
| 66 | GO:0005506: iron ion binding | 1.45E-02 |
| 67 | GO:0015299: solute:proton antiporter activity | 1.54E-02 |
| 68 | GO:0010181: FMN binding | 1.54E-02 |
| 69 | GO:0005355: glucose transmembrane transporter activity | 1.54E-02 |
| 70 | GO:0008017: microtubule binding | 1.69E-02 |
| 71 | GO:0016791: phosphatase activity | 1.95E-02 |
| 72 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.04E-02 |
| 73 | GO:0042802: identical protein binding | 2.06E-02 |
| 74 | GO:0016597: amino acid binding | 2.12E-02 |
| 75 | GO:0004601: peroxidase activity | 2.51E-02 |
| 76 | GO:0016740: transferase activity | 2.70E-02 |
| 77 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.16E-02 |
| 78 | GO:0019825: oxygen binding | 3.27E-02 |
| 79 | GO:0052689: carboxylic ester hydrolase activity | 3.43E-02 |
| 80 | GO:0004364: glutathione transferase activity | 3.68E-02 |
| 81 | GO:0004185: serine-type carboxypeptidase activity | 3.79E-02 |
| 82 | GO:0035091: phosphatidylinositol binding | 4.01E-02 |
| 83 | GO:0003924: GTPase activity | 4.57E-02 |
| 84 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.68E-02 |