co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G61870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070584: mitochondrion morphogenesis	0.00E+00
2	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
3	GO:0061635: regulation of protein complex stability	0.00E+00
4	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
5	GO:0015979: photosynthesis	1.38E-20
6	GO:0009768: photosynthesis, light harvesting in photosystem I	1.73E-13
7	GO:0032544: plastid translation	2.98E-11
8	GO:0018298: protein-chromophore linkage	5.71E-11
9	GO:0010196: nonphotochemical quenching	2.34E-09
10	GO:0090391: granum assembly	2.76E-09
11	GO:0015995: chlorophyll biosynthetic process	1.41E-07
12	GO:0010218: response to far red light	2.46E-07
13	GO:0009637: response to blue light	3.62E-07
14	GO:0009735: response to cytokinin	4.70E-07
15	GO:0010114: response to red light	7.22E-07
16	GO:0009854: oxidative photosynthetic carbon pathway	4.28E-05
17	GO:0009645: response to low light intensity stimulus	5.77E-05
18	GO:0009642: response to light intensity	7.49E-05
19	GO:0006412: translation	7.91E-05
20	GO:0080093: regulation of photorespiration	1.20E-04
21	GO:0031998: regulation of fatty acid beta-oxidation	1.20E-04
22	GO:0009773: photosynthetic electron transport in photosystem I	1.96E-04
23	GO:0043085: positive regulation of catalytic activity	1.96E-04
24	GO:0006094: gluconeogenesis	2.59E-04
25	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.77E-04
26	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.77E-04
27	GO:0019253: reductive pentose-phosphate cycle	2.94E-04
28	GO:0010207: photosystem II assembly	2.94E-04
29	GO:0006636: unsaturated fatty acid biosynthetic process	3.68E-04
30	GO:0009658: chloroplast organization	3.90E-04
31	GO:0042254: ribosome biogenesis	4.02E-04
32	GO:0006000: fructose metabolic process	4.58E-04
33	GO:0006518: peptide metabolic process	4.58E-04
34	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	6.57E-04
35	GO:0042631: cellular response to water deprivation	7.45E-04
36	GO:0006662: glycerol ether metabolic process	8.00E-04
37	GO:0015976: carbon utilization	8.72E-04
38	GO:0009765: photosynthesis, light harvesting	8.72E-04
39	GO:0006109: regulation of carbohydrate metabolic process	8.72E-04
40	GO:0045727: positive regulation of translation	8.72E-04
41	GO:0006536: glutamate metabolic process	8.72E-04
42	GO:0010600: regulation of auxin biosynthetic process	8.72E-04
43	GO:0055114: oxidation-reduction process	9.77E-04
44	GO:0006097: glyoxylate cycle	1.10E-03
45	GO:0006656: phosphatidylcholine biosynthetic process	1.10E-03
46	GO:0043097: pyrimidine nucleoside salvage	1.10E-03
47	GO:0050665: hydrogen peroxide biosynthetic process	1.35E-03
48	GO:0006206: pyrimidine nucleobase metabolic process	1.35E-03
49	GO:0010027: thylakoid membrane organization	1.39E-03
50	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.61E-03
51	GO:0016311: dephosphorylation	1.72E-03
52	GO:0010928: regulation of auxin mediated signaling pathway	2.19E-03
53	GO:0009853: photorespiration	2.28E-03
54	GO:0034599: cellular response to oxidative stress	2.38E-03
55	GO:0006002: fructose 6-phosphate metabolic process	2.50E-03
56	GO:0071482: cellular response to light stimulus	2.50E-03
57	GO:0022900: electron transport chain	2.50E-03
58	GO:0007186: G-protein coupled receptor signaling pathway	2.50E-03
59	GO:0009245: lipid A biosynthetic process	2.82E-03
60	GO:0010206: photosystem II repair	2.82E-03
61	GO:0006783: heme biosynthetic process	2.82E-03
62	GO:0010205: photoinhibition	3.16E-03
63	GO:0006779: porphyrin-containing compound biosynthetic process	3.16E-03
64	GO:0009644: response to high light intensity	3.16E-03
65	GO:0042761: very long-chain fatty acid biosynthetic process	3.16E-03
66	GO:0080167: response to karrikin	3.23E-03
67	GO:0006782: protoporphyrinogen IX biosynthetic process	3.51E-03
68	GO:0009750: response to fructose	3.88E-03
69	GO:0018119: peptidyl-cysteine S-nitrosylation	3.88E-03
70	GO:0009698: phenylpropanoid metabolic process	3.88E-03
71	GO:0072593: reactive oxygen species metabolic process	3.88E-03
72	GO:0006364: rRNA processing	3.93E-03
73	GO:0005983: starch catabolic process	4.26E-03
74	GO:0006108: malate metabolic process	4.64E-03
75	GO:0006006: glucose metabolic process	4.64E-03
76	GO:0005986: sucrose biosynthetic process	4.64E-03
77	GO:0006096: glycolytic process	4.64E-03
78	GO:0006807: nitrogen compound metabolic process	4.64E-03
79	GO:0000027: ribosomal large subunit assembly	6.32E-03
80	GO:0006874: cellular calcium ion homeostasis	6.76E-03
81	GO:0019748: secondary metabolic process	7.69E-03
82	GO:0009693: ethylene biosynthetic process	8.18E-03
83	GO:0006633: fatty acid biosynthetic process	8.77E-03
84	GO:0000413: protein peptidyl-prolyl isomerization	9.68E-03
85	GO:0042335: cuticle development	9.68E-03
86	GO:0009416: response to light stimulus	1.10E-02
87	GO:0055072: iron ion homeostasis	1.13E-02
88	GO:0009627: systemic acquired resistance	1.66E-02
89	GO:0006950: response to stress	1.72E-02
90	GO:0006811: ion transport	1.99E-02
91	GO:0007568: aging	2.05E-02
92	GO:0009631: cold acclimation	2.05E-02
93	GO:0006865: amino acid transport	2.12E-02
94	GO:0045454: cell redox homeostasis	2.23E-02
95	GO:0006099: tricarboxylic acid cycle	2.26E-02
96	GO:0006869: lipid transport	2.44E-02
97	GO:0032259: methylation	2.63E-02
98	GO:0042742: defense response to bacterium	2.67E-02
99	GO:0009585: red, far-red light phototransduction	3.25E-02
100	GO:0043086: negative regulation of catalytic activity	3.66E-02
101	GO:0009409: response to cold	3.89E-02

Rank	GO Term	Adjusted P value
1	GO:0008465: glycerate dehydrogenase activity	0.00E+00
2	GO:0046408: chlorophyll synthetase activity	0.00E+00
3	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
4	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
5	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
6	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
7	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
8	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
9	GO:0008974: phosphoribulokinase activity	0.00E+00
10	GO:0031409: pigment binding	7.25E-14
11	GO:0016168: chlorophyll binding	2.52E-11
12	GO:0019843: rRNA binding	2.99E-07
13	GO:0003735: structural constituent of ribosome	1.66E-06
14	GO:0045485: omega-6 fatty acid desaturase activity	1.20E-04
15	GO:0008047: enzyme activator activity	1.67E-04
16	GO:0008883: glutamyl-tRNA reductase activity	2.77E-04
17	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.77E-04
18	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.77E-04
19	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	2.77E-04
20	GO:0016630: protochlorophyllide reductase activity	2.77E-04
21	GO:0000234: phosphoethanolamine N-methyltransferase activity	2.77E-04
22	GO:0008266: poly(U) RNA binding	2.94E-04
23	GO:0051537: 2 iron, 2 sulfur cluster binding	3.49E-04
24	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.58E-04
25	GO:0004351: glutamate decarboxylase activity	6.57E-04
26	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	6.57E-04
27	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	6.57E-04
28	GO:0016851: magnesium chelatase activity	6.57E-04
29	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	6.57E-04
30	GO:0016491: oxidoreductase activity	6.63E-04
31	GO:0047134: protein-disulfide reductase activity	6.91E-04
32	GO:0004791: thioredoxin-disulfide reductase activity	8.58E-04
33	GO:0008891: glycolate oxidase activity	8.72E-04
34	GO:0008453: alanine-glyoxylate transaminase activity	8.72E-04
35	GO:0004930: G-protein coupled receptor activity	8.72E-04
36	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.11E-03
37	GO:0016615: malate dehydrogenase activity	1.35E-03
38	GO:0004332: fructose-bisphosphate aldolase activity	1.35E-03
39	GO:0031177: phosphopantetheine binding	1.35E-03
40	GO:0030060: L-malate dehydrogenase activity	1.61E-03
41	GO:0004849: uridine kinase activity	1.61E-03
42	GO:0000035: acyl binding	1.61E-03
43	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.19E-03
44	GO:0004033: aldo-keto reductase (NADP) activity	2.19E-03
45	GO:0003993: acid phosphatase activity	2.38E-03
46	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	2.50E-03
47	GO:0050661: NADP binding	2.59E-03
48	GO:0004185: serine-type carboxypeptidase activity	2.93E-03
49	GO:0051287: NAD binding	3.53E-03
50	GO:0046872: metal ion binding	4.08E-03
51	GO:0004089: carbonate dehydratase activity	4.64E-03
52	GO:0031072: heat shock protein binding	4.64E-03
53	GO:0005217: intracellular ligand-gated ion channel activity	5.46E-03
54	GO:0004970: ionotropic glutamate receptor activity	5.46E-03
55	GO:0015035: protein disulfide oxidoreductase activity	5.75E-03
56	GO:0009055: electron carrier activity	5.78E-03
57	GO:0004857: enzyme inhibitor activity	6.32E-03
58	GO:0043424: protein histidine kinase binding	6.76E-03
59	GO:0005216: ion channel activity	6.76E-03
60	GO:0005515: protein binding	7.85E-03
61	GO:0010181: FMN binding	1.07E-02
62	GO:0050662: coenzyme binding	1.07E-02
63	GO:0004222: metalloendopeptidase activity	1.99E-02
64	GO:0003746: translation elongation factor activity	2.19E-02
65	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.93E-02
66	GO:0015171: amino acid transmembrane transporter activity	3.49E-02
67	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.74E-02
68	GO:0008289: lipid binding	3.81E-02
69	GO:0051082: unfolded protein binding	4.17E-02