GO Enrichment Analysis of Co-expressed Genes with
AT3G61080
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 4.74E-06 |
| 6 | GO:0009735: response to cytokinin | 5.52E-06 |
| 7 | GO:0006094: gluconeogenesis | 1.94E-05 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 2.25E-05 |
| 9 | GO:0009704: de-etiolation | 1.53E-04 |
| 10 | GO:0048564: photosystem I assembly | 1.53E-04 |
| 11 | GO:0009658: chloroplast organization | 1.76E-04 |
| 12 | GO:0043953: protein transport by the Tat complex | 1.91E-04 |
| 13 | GO:0051180: vitamin transport | 1.91E-04 |
| 14 | GO:0071277: cellular response to calcium ion | 1.91E-04 |
| 15 | GO:0030974: thiamine pyrophosphate transport | 1.91E-04 |
| 16 | GO:0046467: membrane lipid biosynthetic process | 1.91E-04 |
| 17 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.91E-04 |
| 18 | GO:0000481: maturation of 5S rRNA | 1.91E-04 |
| 19 | GO:1904964: positive regulation of phytol biosynthetic process | 1.91E-04 |
| 20 | GO:0065002: intracellular protein transmembrane transport | 1.91E-04 |
| 21 | GO:0043686: co-translational protein modification | 1.91E-04 |
| 22 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.91E-04 |
| 23 | GO:0043007: maintenance of rDNA | 1.91E-04 |
| 24 | GO:1902458: positive regulation of stomatal opening | 1.91E-04 |
| 25 | GO:0034337: RNA folding | 1.91E-04 |
| 26 | GO:0006098: pentose-phosphate shunt | 2.33E-04 |
| 27 | GO:0010027: thylakoid membrane organization | 2.70E-04 |
| 28 | GO:0010205: photoinhibition | 2.78E-04 |
| 29 | GO:0055114: oxidation-reduction process | 3.67E-04 |
| 30 | GO:0009773: photosynthetic electron transport in photosystem I | 3.78E-04 |
| 31 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 4.29E-04 |
| 32 | GO:0015893: drug transport | 4.29E-04 |
| 33 | GO:0006650: glycerophospholipid metabolic process | 4.29E-04 |
| 34 | GO:0008616: queuosine biosynthetic process | 4.29E-04 |
| 35 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 4.29E-04 |
| 36 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.29E-04 |
| 37 | GO:0010207: photosystem II assembly | 5.55E-04 |
| 38 | GO:0006000: fructose metabolic process | 6.99E-04 |
| 39 | GO:0046168: glycerol-3-phosphate catabolic process | 6.99E-04 |
| 40 | GO:0044375: regulation of peroxisome size | 6.99E-04 |
| 41 | GO:0031408: oxylipin biosynthetic process | 9.21E-04 |
| 42 | GO:0006072: glycerol-3-phosphate metabolic process | 9.97E-04 |
| 43 | GO:0033014: tetrapyrrole biosynthetic process | 9.97E-04 |
| 44 | GO:0010731: protein glutathionylation | 9.97E-04 |
| 45 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 9.97E-04 |
| 46 | GO:0009152: purine ribonucleotide biosynthetic process | 9.97E-04 |
| 47 | GO:0046653: tetrahydrofolate metabolic process | 9.97E-04 |
| 48 | GO:0010600: regulation of auxin biosynthetic process | 1.32E-03 |
| 49 | GO:0006546: glycine catabolic process | 1.32E-03 |
| 50 | GO:0010021: amylopectin biosynthetic process | 1.32E-03 |
| 51 | GO:0045727: positive regulation of translation | 1.32E-03 |
| 52 | GO:0000304: response to singlet oxygen | 1.68E-03 |
| 53 | GO:0006564: L-serine biosynthetic process | 1.68E-03 |
| 54 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.68E-03 |
| 55 | GO:0031365: N-terminal protein amino acid modification | 1.68E-03 |
| 56 | GO:0006465: signal peptide processing | 1.68E-03 |
| 57 | GO:0032502: developmental process | 1.95E-03 |
| 58 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.07E-03 |
| 59 | GO:0042549: photosystem II stabilization | 2.07E-03 |
| 60 | GO:0032259: methylation | 2.45E-03 |
| 61 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.49E-03 |
| 62 | GO:0000054: ribosomal subunit export from nucleus | 2.49E-03 |
| 63 | GO:1900057: positive regulation of leaf senescence | 2.93E-03 |
| 64 | GO:0006400: tRNA modification | 2.93E-03 |
| 65 | GO:0050790: regulation of catalytic activity | 2.93E-03 |
| 66 | GO:0010161: red light signaling pathway | 2.93E-03 |
| 67 | GO:0006810: transport | 3.01E-03 |
| 68 | GO:0010411: xyloglucan metabolic process | 3.09E-03 |
| 69 | GO:0042255: ribosome assembly | 3.40E-03 |
| 70 | GO:0006353: DNA-templated transcription, termination | 3.40E-03 |
| 71 | GO:0009690: cytokinin metabolic process | 3.40E-03 |
| 72 | GO:0032508: DNA duplex unwinding | 3.40E-03 |
| 73 | GO:2000070: regulation of response to water deprivation | 3.40E-03 |
| 74 | GO:0016559: peroxisome fission | 3.40E-03 |
| 75 | GO:0010928: regulation of auxin mediated signaling pathway | 3.40E-03 |
| 76 | GO:0005978: glycogen biosynthetic process | 3.40E-03 |
| 77 | GO:0007186: G-protein coupled receptor signaling pathway | 3.88E-03 |
| 78 | GO:0009657: plastid organization | 3.88E-03 |
| 79 | GO:0006526: arginine biosynthetic process | 3.88E-03 |
| 80 | GO:0032544: plastid translation | 3.88E-03 |
| 81 | GO:0009932: cell tip growth | 3.88E-03 |
| 82 | GO:0006002: fructose 6-phosphate metabolic process | 3.88E-03 |
| 83 | GO:0015996: chlorophyll catabolic process | 3.88E-03 |
| 84 | GO:0009821: alkaloid biosynthetic process | 4.40E-03 |
| 85 | GO:0010206: photosystem II repair | 4.40E-03 |
| 86 | GO:0090333: regulation of stomatal closure | 4.40E-03 |
| 87 | GO:0006783: heme biosynthetic process | 4.40E-03 |
| 88 | GO:0005982: starch metabolic process | 4.93E-03 |
| 89 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.93E-03 |
| 90 | GO:0006535: cysteine biosynthetic process from serine | 5.48E-03 |
| 91 | GO:0042546: cell wall biogenesis | 5.79E-03 |
| 92 | GO:0006415: translational termination | 6.06E-03 |
| 93 | GO:0019684: photosynthesis, light reaction | 6.06E-03 |
| 94 | GO:0072593: reactive oxygen species metabolic process | 6.06E-03 |
| 95 | GO:0000272: polysaccharide catabolic process | 6.06E-03 |
| 96 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.06E-03 |
| 97 | GO:0045037: protein import into chloroplast stroma | 6.66E-03 |
| 98 | GO:0018107: peptidyl-threonine phosphorylation | 7.28E-03 |
| 99 | GO:0005986: sucrose biosynthetic process | 7.28E-03 |
| 100 | GO:0019253: reductive pentose-phosphate cycle | 7.91E-03 |
| 101 | GO:0005985: sucrose metabolic process | 8.57E-03 |
| 102 | GO:0007031: peroxisome organization | 8.57E-03 |
| 103 | GO:0006096: glycolytic process | 8.88E-03 |
| 104 | GO:0006636: unsaturated fatty acid biosynthetic process | 9.25E-03 |
| 105 | GO:0006833: water transport | 9.25E-03 |
| 106 | GO:0019762: glucosinolate catabolic process | 9.25E-03 |
| 107 | GO:0019344: cysteine biosynthetic process | 9.94E-03 |
| 108 | GO:0005975: carbohydrate metabolic process | 1.07E-02 |
| 109 | GO:0048511: rhythmic process | 1.14E-02 |
| 110 | GO:0061077: chaperone-mediated protein folding | 1.14E-02 |
| 111 | GO:0019748: secondary metabolic process | 1.21E-02 |
| 112 | GO:0010017: red or far-red light signaling pathway | 1.21E-02 |
| 113 | GO:0009306: protein secretion | 1.37E-02 |
| 114 | GO:0009058: biosynthetic process | 1.42E-02 |
| 115 | GO:0034220: ion transmembrane transport | 1.53E-02 |
| 116 | GO:0042631: cellular response to water deprivation | 1.53E-02 |
| 117 | GO:0006520: cellular amino acid metabolic process | 1.62E-02 |
| 118 | GO:0010182: sugar mediated signaling pathway | 1.62E-02 |
| 119 | GO:0006413: translational initiation | 1.73E-02 |
| 120 | GO:0019252: starch biosynthetic process | 1.79E-02 |
| 121 | GO:0008654: phospholipid biosynthetic process | 1.79E-02 |
| 122 | GO:0030163: protein catabolic process | 2.06E-02 |
| 123 | GO:0009567: double fertilization forming a zygote and endosperm | 2.15E-02 |
| 124 | GO:0042128: nitrate assimilation | 2.64E-02 |
| 125 | GO:0018298: protein-chromophore linkage | 2.95E-02 |
| 126 | GO:0007568: aging | 3.27E-02 |
| 127 | GO:0055085: transmembrane transport | 3.36E-02 |
| 128 | GO:0006412: translation | 3.44E-02 |
| 129 | GO:0046686: response to cadmium ion | 3.49E-02 |
| 130 | GO:0009853: photorespiration | 3.49E-02 |
| 131 | GO:0034599: cellular response to oxidative stress | 3.60E-02 |
| 132 | GO:0006839: mitochondrial transport | 3.83E-02 |
| 133 | GO:0044550: secondary metabolite biosynthetic process | 3.87E-02 |
| 134 | GO:0010114: response to red light | 4.18E-02 |
| 135 | GO:0009636: response to toxic substance | 4.54E-02 |
| 136 | GO:0009664: plant-type cell wall organization | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0018708: thiol S-methyltransferase activity | 1.74E-06 |
| 4 | GO:0019843: rRNA binding | 2.19E-06 |
| 5 | GO:0016851: magnesium chelatase activity | 1.47E-05 |
| 6 | GO:0005528: FK506 binding | 4.10E-05 |
| 7 | GO:0004332: fructose-bisphosphate aldolase activity | 6.48E-05 |
| 8 | GO:0016491: oxidoreductase activity | 1.73E-04 |
| 9 | GO:0004325: ferrochelatase activity | 1.91E-04 |
| 10 | GO:0042586: peptide deformylase activity | 1.91E-04 |
| 11 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.91E-04 |
| 12 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.91E-04 |
| 13 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.91E-04 |
| 14 | GO:0090422: thiamine pyrophosphate transporter activity | 1.91E-04 |
| 15 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.29E-04 |
| 16 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 4.29E-04 |
| 17 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 4.29E-04 |
| 18 | GO:0050017: L-3-cyanoalanine synthase activity | 4.29E-04 |
| 19 | GO:0010297: heteropolysaccharide binding | 4.29E-04 |
| 20 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 4.29E-04 |
| 21 | GO:0004617: phosphoglycerate dehydrogenase activity | 4.29E-04 |
| 22 | GO:0004047: aminomethyltransferase activity | 4.29E-04 |
| 23 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.29E-04 |
| 24 | GO:0008479: queuine tRNA-ribosyltransferase activity | 4.29E-04 |
| 25 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 4.29E-04 |
| 26 | GO:0043024: ribosomal small subunit binding | 4.29E-04 |
| 27 | GO:0004565: beta-galactosidase activity | 4.93E-04 |
| 28 | GO:0031072: heat shock protein binding | 4.93E-04 |
| 29 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.99E-04 |
| 30 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.99E-04 |
| 31 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.99E-04 |
| 32 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.99E-04 |
| 33 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.99E-04 |
| 34 | GO:0043169: cation binding | 6.99E-04 |
| 35 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.71E-04 |
| 36 | GO:0051287: NAD binding | 9.10E-04 |
| 37 | GO:0008168: methyltransferase activity | 9.92E-04 |
| 38 | GO:0003727: single-stranded RNA binding | 1.18E-03 |
| 39 | GO:0043495: protein anchor | 1.32E-03 |
| 40 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.32E-03 |
| 41 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.83E-03 |
| 42 | GO:0004124: cysteine synthase activity | 2.49E-03 |
| 43 | GO:0019899: enzyme binding | 2.93E-03 |
| 44 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.09E-03 |
| 45 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.88E-03 |
| 46 | GO:0042802: identical protein binding | 4.37E-03 |
| 47 | GO:0071949: FAD binding | 4.40E-03 |
| 48 | GO:0016844: strictosidine synthase activity | 4.93E-03 |
| 49 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.93E-03 |
| 50 | GO:0016887: ATPase activity | 5.10E-03 |
| 51 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.02E-03 |
| 52 | GO:0019888: protein phosphatase regulator activity | 7.28E-03 |
| 53 | GO:0008266: poly(U) RNA binding | 7.91E-03 |
| 54 | GO:0051082: unfolded protein binding | 1.07E-02 |
| 55 | GO:0004176: ATP-dependent peptidase activity | 1.14E-02 |
| 56 | GO:0022891: substrate-specific transmembrane transporter activity | 1.29E-02 |
| 57 | GO:0050662: coenzyme binding | 1.70E-02 |
| 58 | GO:0003735: structural constituent of ribosome | 1.70E-02 |
| 59 | GO:0048038: quinone binding | 1.88E-02 |
| 60 | GO:0008483: transaminase activity | 2.25E-02 |
| 61 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.25E-02 |
| 62 | GO:0008237: metallopeptidase activity | 2.25E-02 |
| 63 | GO:0016597: amino acid binding | 2.34E-02 |
| 64 | GO:0015250: water channel activity | 2.44E-02 |
| 65 | GO:0016168: chlorophyll binding | 2.54E-02 |
| 66 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.84E-02 |
| 67 | GO:0004222: metalloendopeptidase activity | 3.16E-02 |
| 68 | GO:0003729: mRNA binding | 3.27E-02 |
| 69 | GO:0003746: translation elongation factor activity | 3.49E-02 |
| 70 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.53E-02 |
| 71 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.83E-02 |
| 72 | GO:0004364: glutathione transferase activity | 4.06E-02 |
| 73 | GO:0004185: serine-type carboxypeptidase activity | 4.18E-02 |
| 74 | GO:0035091: phosphatidylinositol binding | 4.41E-02 |
| 75 | GO:0043621: protein self-association | 4.41E-02 |
| 76 | GO:0005198: structural molecule activity | 4.54E-02 |