co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G60800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006983: ER overload response	0.00E+00
2	GO:0032499: detection of peptidoglycan	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
5	GO:0006216: cytidine catabolic process	0.00E+00
6	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
7	GO:0033198: response to ATP	0.00E+00
8	GO:0046109: uridine biosynthetic process	0.00E+00
9	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
10	GO:0046680: response to DDT	0.00E+00
11	GO:0006468: protein phosphorylation	2.46E-06
12	GO:0032491: detection of molecule of fungal origin	3.44E-04
13	GO:0042759: long-chain fatty acid biosynthetic process	3.44E-04
14	GO:0034975: protein folding in endoplasmic reticulum	3.44E-04
15	GO:0042350: GDP-L-fucose biosynthetic process	3.44E-04
16	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.44E-04
17	GO:0033306: phytol metabolic process	3.44E-04
18	GO:1902265: abscisic acid homeostasis	3.44E-04
19	GO:0000032: cell wall mannoprotein biosynthetic process	3.44E-04
20	GO:0010045: response to nickel cation	3.44E-04
21	GO:0006486: protein glycosylation	5.07E-04
22	GO:0010112: regulation of systemic acquired resistance	5.47E-04
23	GO:0006952: defense response	6.07E-04
24	GO:0010042: response to manganese ion	7.51E-04
25	GO:0010271: regulation of chlorophyll catabolic process	7.51E-04
26	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	7.51E-04
27	GO:0015012: heparan sulfate proteoglycan biosynthetic process	7.51E-04
28	GO:0080181: lateral root branching	7.51E-04
29	GO:0006024: glycosaminoglycan biosynthetic process	7.51E-04
30	GO:0010115: regulation of abscisic acid biosynthetic process	7.51E-04
31	GO:0051258: protein polymerization	7.51E-04
32	GO:0060919: auxin influx	7.51E-04
33	GO:0043066: negative regulation of apoptotic process	7.51E-04
34	GO:0005976: polysaccharide metabolic process	7.51E-04
35	GO:0042742: defense response to bacterium	7.94E-04
36	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.21E-03
37	GO:0033591: response to L-ascorbic acid	1.21E-03
38	GO:0015695: organic cation transport	1.21E-03
39	GO:0010498: proteasomal protein catabolic process	1.21E-03
40	GO:0034605: cellular response to heat	1.26E-03
41	GO:0006499: N-terminal protein myristoylation	1.27E-03
42	GO:0010043: response to zinc ion	1.35E-03
43	GO:0015696: ammonium transport	1.75E-03
44	GO:0071323: cellular response to chitin	1.75E-03
45	GO:0046513: ceramide biosynthetic process	1.75E-03
46	GO:0046713: borate transport	1.75E-03
47	GO:0009298: GDP-mannose biosynthetic process	1.75E-03
48	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.75E-03
49	GO:0010306: rhamnogalacturonan II biosynthetic process	1.75E-03
50	GO:0009226: nucleotide-sugar biosynthetic process	1.75E-03
51	GO:0009687: abscisic acid metabolic process	2.35E-03
52	GO:0072488: ammonium transmembrane transport	2.35E-03
53	GO:0033356: UDP-L-arabinose metabolic process	2.35E-03
54	GO:0071219: cellular response to molecule of bacterial origin	2.35E-03
55	GO:0009229: thiamine diphosphate biosynthetic process	3.00E-03
56	GO:0009247: glycolipid biosynthetic process	3.00E-03
57	GO:0033365: protein localization to organelle	3.71E-03
58	GO:0002238: response to molecule of fungal origin	3.71E-03
59	GO:0006014: D-ribose metabolic process	3.71E-03
60	GO:0009972: cytidine deamination	3.71E-03
61	GO:0010405: arabinogalactan protein metabolic process	3.71E-03
62	GO:0010315: auxin efflux	3.71E-03
63	GO:0034314: Arp2/3 complex-mediated actin nucleation	3.71E-03
64	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.71E-03
65	GO:0045491: xylan metabolic process	3.71E-03
66	GO:0009228: thiamine biosynthetic process	3.71E-03
67	GO:1900425: negative regulation of defense response to bacterium	3.71E-03
68	GO:0015031: protein transport	4.25E-03
69	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.47E-03
70	GO:0007165: signal transduction	4.56E-03
71	GO:0010038: response to metal ion	5.27E-03
72	GO:0046470: phosphatidylcholine metabolic process	5.27E-03
73	GO:1900056: negative regulation of leaf senescence	5.27E-03
74	GO:0009850: auxin metabolic process	6.13E-03
75	GO:0043068: positive regulation of programmed cell death	6.13E-03
76	GO:0019375: galactolipid biosynthetic process	6.13E-03
77	GO:0009819: drought recovery	6.13E-03
78	GO:1900150: regulation of defense response to fungus	6.13E-03
79	GO:0006367: transcription initiation from RNA polymerase II promoter	7.03E-03
80	GO:0006997: nucleus organization	7.03E-03
81	GO:0009808: lignin metabolic process	7.03E-03
82	GO:0016311: dephosphorylation	7.65E-03
83	GO:0046916: cellular transition metal ion homeostasis	7.97E-03
84	GO:0009060: aerobic respiration	7.97E-03
85	GO:0009056: catabolic process	7.97E-03
86	GO:0000902: cell morphogenesis	7.97E-03
87	GO:0019432: triglyceride biosynthetic process	7.97E-03
88	GO:0080144: amino acid homeostasis	7.97E-03
89	GO:0030244: cellulose biosynthetic process	8.05E-03
90	GO:0048268: clathrin coat assembly	8.96E-03
91	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.96E-03
92	GO:0010380: regulation of chlorophyll biosynthetic process	8.96E-03
93	GO:0009751: response to salicylic acid	9.52E-03
94	GO:0043069: negative regulation of programmed cell death	1.00E-02
95	GO:0030148: sphingolipid biosynthetic process	1.11E-02
96	GO:0046856: phosphatidylinositol dephosphorylation	1.11E-02
97	GO:0000038: very long-chain fatty acid metabolic process	1.11E-02
98	GO:0009682: induced systemic resistance	1.11E-02
99	GO:0006470: protein dephosphorylation	1.14E-02
100	GO:0007166: cell surface receptor signaling pathway	1.14E-02
101	GO:0000266: mitochondrial fission	1.22E-02
102	GO:0006790: sulfur compound metabolic process	1.22E-02
103	GO:0012501: programmed cell death	1.22E-02
104	GO:0006631: fatty acid metabolic process	1.22E-02
105	GO:0045037: protein import into chloroplast stroma	1.22E-02
106	GO:0006006: glucose metabolic process	1.33E-02
107	GO:0055046: microgametogenesis	1.33E-02
108	GO:0010102: lateral root morphogenesis	1.33E-02
109	GO:0007034: vacuolar transport	1.45E-02
110	GO:0007015: actin filament organization	1.45E-02
111	GO:0010540: basipetal auxin transport	1.45E-02
112	GO:0002237: response to molecule of bacterial origin	1.45E-02
113	GO:0010030: positive regulation of seed germination	1.58E-02
114	GO:0070588: calcium ion transmembrane transport	1.58E-02
115	GO:0046854: phosphatidylinositol phosphorylation	1.58E-02
116	GO:0010053: root epidermal cell differentiation	1.58E-02
117	GO:0009825: multidimensional cell growth	1.58E-02
118	GO:0010167: response to nitrate	1.58E-02
119	GO:0019853: L-ascorbic acid biosynthetic process	1.58E-02
120	GO:0034976: response to endoplasmic reticulum stress	1.70E-02
121	GO:0080147: root hair cell development	1.83E-02
122	GO:0003333: amino acid transmembrane transport	2.10E-02
123	GO:0006096: glycolytic process	2.11E-02
124	GO:0009814: defense response, incompatible interaction	2.24E-02
125	GO:0016192: vesicle-mediated transport	2.35E-02
126	GO:0046777: protein autophosphorylation	2.40E-02
127	GO:0044550: secondary metabolite biosynthetic process	2.45E-02
128	GO:0035556: intracellular signal transduction	2.50E-02
129	GO:0010584: pollen exine formation	2.53E-02
130	GO:0045492: xylan biosynthetic process	2.53E-02
131	GO:0006284: base-excision repair	2.53E-02
132	GO:0009561: megagametogenesis	2.53E-02
133	GO:0070417: cellular response to cold	2.68E-02
134	GO:0080022: primary root development	2.83E-02
135	GO:0008033: tRNA processing	2.83E-02
136	GO:0000413: protein peptidyl-prolyl isomerization	2.83E-02
137	GO:0042391: regulation of membrane potential	2.83E-02
138	GO:0006886: intracellular protein transport	2.87E-02
139	GO:0071472: cellular response to salt stress	2.99E-02
140	GO:0048544: recognition of pollen	3.15E-02
141	GO:0009646: response to absence of light	3.15E-02
142	GO:0009749: response to glucose	3.31E-02
143	GO:0019252: starch biosynthetic process	3.31E-02
144	GO:0006891: intra-Golgi vesicle-mediated transport	3.47E-02
145	GO:0002229: defense response to oomycetes	3.47E-02
146	GO:0009630: gravitropism	3.64E-02
147	GO:0007264: small GTPase mediated signal transduction	3.64E-02
148	GO:0030163: protein catabolic process	3.81E-02
149	GO:0010090: trichome morphogenesis	3.81E-02
150	GO:0006464: cellular protein modification process	3.98E-02
151	GO:0006633: fatty acid biosynthetic process	4.00E-02
152	GO:0010286: heat acclimation	4.15E-02
153	GO:0016310: phosphorylation	4.25E-02
154	GO:0009816: defense response to bacterium, incompatible interaction	4.69E-02
155	GO:0006906: vesicle fusion	4.87E-02
156	GO:0009739: response to gibberellin	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:2001080: chitosan binding	0.00E+00
4	GO:0034338: short-chain carboxylesterase activity	0.00E+00
5	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
6	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
7	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
8	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
9	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
10	GO:0047844: deoxycytidine deaminase activity	0.00E+00
11	GO:0005212: structural constituent of eye lens	0.00E+00
12	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
13	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
14	GO:0016301: kinase activity	8.30E-07
15	GO:0004674: protein serine/threonine kinase activity	4.21E-05
16	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.96E-05
17	GO:0008320: protein transmembrane transporter activity	2.96E-04
18	GO:0004476: mannose-6-phosphate isomerase activity	3.44E-04
19	GO:0046481: digalactosyldiacylglycerol synthase activity	3.44E-04
20	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.44E-04
21	GO:0050577: GDP-L-fucose synthase activity	3.44E-04
22	GO:0005524: ATP binding	3.89E-04
23	GO:0030775: glucuronoxylan 4-O-methyltransferase activity	7.51E-04
24	GO:0050291: sphingosine N-acyltransferase activity	7.51E-04
25	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	7.51E-04
26	GO:0045140: inositol phosphoceramide synthase activity	7.51E-04
27	GO:0004751: ribose-5-phosphate isomerase activity	1.21E-03
28	GO:0000030: mannosyltransferase activity	1.21E-03
29	GO:0016174: NAD(P)H oxidase activity	1.21E-03
30	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.21E-03
31	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.75E-03
32	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.75E-03
33	GO:0035250: UDP-galactosyltransferase activity	1.75E-03
34	GO:0001075: transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly	2.35E-03
35	GO:0010328: auxin influx transmembrane transporter activity	2.35E-03
36	GO:0019199: transmembrane receptor protein kinase activity	2.35E-03
37	GO:0003756: protein disulfide isomerase activity	2.74E-03
38	GO:0005102: receptor binding	2.96E-03
39	GO:0004623: phospholipase A2 activity	3.00E-03
40	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.00E-03
41	GO:0008725: DNA-3-methyladenine glycosylase activity	3.00E-03
42	GO:0010294: abscisic acid glucosyltransferase activity	3.00E-03
43	GO:0035252: UDP-xylosyltransferase activity	3.71E-03
44	GO:0008519: ammonium transmembrane transporter activity	3.71E-03
45	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.71E-03
46	GO:0004144: diacylglycerol O-acyltransferase activity	4.47E-03
47	GO:0004126: cytidine deaminase activity	4.47E-03
48	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.47E-03
49	GO:0102391: decanoate--CoA ligase activity	4.47E-03
50	GO:0004747: ribokinase activity	4.47E-03
51	GO:0004467: long-chain fatty acid-CoA ligase activity	5.27E-03
52	GO:0004672: protein kinase activity	5.81E-03
53	GO:0004708: MAP kinase kinase activity	6.13E-03
54	GO:0004714: transmembrane receptor protein tyrosine kinase activity	6.13E-03
55	GO:0008865: fructokinase activity	6.13E-03
56	GO:0008375: acetylglucosaminyltransferase activity	6.89E-03
57	GO:0004630: phospholipase D activity	7.03E-03
58	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	7.03E-03
59	GO:0004252: serine-type endopeptidase activity	7.30E-03
60	GO:0071949: FAD binding	7.97E-03
61	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	7.97E-03
62	GO:0030955: potassium ion binding	8.96E-03
63	GO:0004743: pyruvate kinase activity	8.96E-03
64	GO:0005545: 1-phosphatidylinositol binding	1.00E-02
65	GO:0004713: protein tyrosine kinase activity	1.00E-02
66	GO:0008194: UDP-glycosyltransferase activity	1.11E-02
67	GO:0008559: xenobiotic-transporting ATPase activity	1.11E-02
68	GO:0050661: NADP binding	1.17E-02
69	GO:0015198: oligopeptide transporter activity	1.22E-02
70	GO:0008378: galactosyltransferase activity	1.22E-02
71	GO:0000049: tRNA binding	1.22E-02
72	GO:0031072: heat shock protein binding	1.33E-02
73	GO:0005388: calcium-transporting ATPase activity	1.33E-02
74	GO:0010329: auxin efflux transmembrane transporter activity	1.33E-02
75	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.33E-02
76	GO:0004190: aspartic-type endopeptidase activity	1.58E-02
77	GO:0030552: cAMP binding	1.58E-02
78	GO:0030553: cGMP binding	1.58E-02
79	GO:0008061: chitin binding	1.58E-02
80	GO:0004725: protein tyrosine phosphatase activity	1.70E-02
81	GO:0003954: NADH dehydrogenase activity	1.83E-02
82	GO:0008134: transcription factor binding	1.83E-02
83	GO:0005216: ion channel activity	1.96E-02
84	GO:0031625: ubiquitin protein ligase binding	1.98E-02
85	GO:0033612: receptor serine/threonine kinase binding	2.10E-02
86	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.53E-02
87	GO:0005249: voltage-gated potassium channel activity	2.83E-02
88	GO:0030551: cyclic nucleotide binding	2.83E-02
89	GO:0042803: protein homodimerization activity	2.93E-02
90	GO:0003713: transcription coactivator activity	2.99E-02
91	GO:0030276: clathrin binding	2.99E-02
92	GO:0004722: protein serine/threonine phosphatase activity	3.10E-02
93	GO:0050662: coenzyme binding	3.15E-02
94	GO:0016853: isomerase activity	3.15E-02
95	GO:0019901: protein kinase binding	3.31E-02
96	GO:0016757: transferase activity, transferring glycosyl groups	3.38E-02
97	GO:0004197: cysteine-type endopeptidase activity	3.64E-02
98	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.81E-02
99	GO:0005200: structural constituent of cytoskeleton	4.15E-02
100	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.15E-02
101	GO:0008237: metallopeptidase activity	4.15E-02
102	GO:0005516: calmodulin binding	4.18E-02
103	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.87E-02