GO Enrichment Analysis of Co-expressed Genes with
AT3G60630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 2 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 3 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
| 4 | GO:0006518: peptide metabolic process | 1.53E-06 |
| 5 | GO:0009102: biotin biosynthetic process | 3.65E-06 |
| 6 | GO:1900865: chloroplast RNA modification | 8.63E-05 |
| 7 | GO:0010267: production of ta-siRNAs involved in RNA interference | 8.63E-05 |
| 8 | GO:0010540: basipetal auxin transport | 1.86E-04 |
| 9 | GO:1901529: positive regulation of anion channel activity | 2.04E-04 |
| 10 | GO:0048731: system development | 2.04E-04 |
| 11 | GO:0050688: regulation of defense response to virus | 2.04E-04 |
| 12 | GO:0010541: acropetal auxin transport | 2.04E-04 |
| 13 | GO:0051214: RNA virus induced gene silencing | 2.04E-04 |
| 14 | GO:0030029: actin filament-based process | 3.42E-04 |
| 15 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 3.42E-04 |
| 16 | GO:0010371: regulation of gibberellin biosynthetic process | 4.92E-04 |
| 17 | GO:0010305: leaf vascular tissue pattern formation | 5.23E-04 |
| 18 | GO:0006221: pyrimidine nucleotide biosynthetic process | 6.55E-04 |
| 19 | GO:0009956: radial pattern formation | 6.55E-04 |
| 20 | GO:1900864: mitochondrial RNA modification | 6.55E-04 |
| 21 | GO:0009616: virus induced gene silencing | 8.29E-04 |
| 22 | GO:0051607: defense response to virus | 8.66E-04 |
| 23 | GO:0016554: cytidine to uridine editing | 1.01E-03 |
| 24 | GO:0045962: positive regulation of development, heterochronic | 1.01E-03 |
| 25 | GO:0060918: auxin transport | 1.01E-03 |
| 26 | GO:0042793: transcription from plastid promoter | 1.01E-03 |
| 27 | GO:0006574: valine catabolic process | 1.01E-03 |
| 28 | GO:0042549: photosystem II stabilization | 1.01E-03 |
| 29 | GO:0009959: negative gravitropism | 1.01E-03 |
| 30 | GO:0009942: longitudinal axis specification | 1.20E-03 |
| 31 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.20E-03 |
| 32 | GO:0010050: vegetative phase change | 1.41E-03 |
| 33 | GO:0048366: leaf development | 1.72E-03 |
| 34 | GO:0001510: RNA methylation | 1.86E-03 |
| 35 | GO:0019430: removal of superoxide radicals | 1.86E-03 |
| 36 | GO:0048589: developmental growth | 2.10E-03 |
| 37 | GO:0009965: leaf morphogenesis | 2.12E-03 |
| 38 | GO:0016571: histone methylation | 2.35E-03 |
| 39 | GO:0016573: histone acetylation | 2.35E-03 |
| 40 | GO:0030422: production of siRNA involved in RNA interference | 2.61E-03 |
| 41 | GO:0048829: root cap development | 2.61E-03 |
| 42 | GO:0009641: shade avoidance | 2.61E-03 |
| 43 | GO:0008285: negative regulation of cell proliferation | 2.87E-03 |
| 44 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.87E-03 |
| 45 | GO:0009750: response to fructose | 2.87E-03 |
| 46 | GO:0010216: maintenance of DNA methylation | 2.87E-03 |
| 47 | GO:0046856: phosphatidylinositol dephosphorylation | 2.87E-03 |
| 48 | GO:0012501: programmed cell death | 3.15E-03 |
| 49 | GO:0010152: pollen maturation | 3.15E-03 |
| 50 | GO:0009793: embryo development ending in seed dormancy | 3.23E-03 |
| 51 | GO:0009933: meristem structural organization | 3.73E-03 |
| 52 | GO:0009266: response to temperature stimulus | 3.73E-03 |
| 53 | GO:0009825: multidimensional cell growth | 4.03E-03 |
| 54 | GO:0010025: wax biosynthetic process | 4.34E-03 |
| 55 | GO:0006863: purine nucleobase transport | 4.34E-03 |
| 56 | GO:0006338: chromatin remodeling | 4.65E-03 |
| 57 | GO:2000377: regulation of reactive oxygen species metabolic process | 4.65E-03 |
| 58 | GO:0003333: amino acid transmembrane transport | 5.32E-03 |
| 59 | GO:0010431: seed maturation | 5.32E-03 |
| 60 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 5.66E-03 |
| 61 | GO:0009451: RNA modification | 6.32E-03 |
| 62 | GO:0048443: stamen development | 6.36E-03 |
| 63 | GO:0042127: regulation of cell proliferation | 6.36E-03 |
| 64 | GO:0071472: cellular response to salt stress | 7.48E-03 |
| 65 | GO:0009749: response to glucose | 8.26E-03 |
| 66 | GO:0080156: mitochondrial mRNA modification | 8.66E-03 |
| 67 | GO:0031047: gene silencing by RNA | 9.07E-03 |
| 68 | GO:0032502: developmental process | 9.07E-03 |
| 69 | GO:0030163: protein catabolic process | 9.48E-03 |
| 70 | GO:0009639: response to red or far red light | 9.91E-03 |
| 71 | GO:0016311: dephosphorylation | 1.31E-02 |
| 72 | GO:0045892: negative regulation of transcription, DNA-templated | 1.45E-02 |
| 73 | GO:0009910: negative regulation of flower development | 1.50E-02 |
| 74 | GO:0006865: amino acid transport | 1.55E-02 |
| 75 | GO:0006508: proteolysis | 1.87E-02 |
| 76 | GO:0008283: cell proliferation | 1.92E-02 |
| 77 | GO:0009926: auxin polar transport | 1.92E-02 |
| 78 | GO:0009744: response to sucrose | 1.92E-02 |
| 79 | GO:0031347: regulation of defense response | 2.19E-02 |
| 80 | GO:0006260: DNA replication | 2.19E-02 |
| 81 | GO:0009736: cytokinin-activated signaling pathway | 2.37E-02 |
| 82 | GO:0009734: auxin-activated signaling pathway | 2.48E-02 |
| 83 | GO:0048316: seed development | 2.73E-02 |
| 84 | GO:0016569: covalent chromatin modification | 2.92E-02 |
| 85 | GO:0009740: gibberellic acid mediated signaling pathway | 2.92E-02 |
| 86 | GO:0006396: RNA processing | 3.11E-02 |
| 87 | GO:0051726: regulation of cell cycle | 3.17E-02 |
| 88 | GO:0009742: brassinosteroid mediated signaling pathway | 3.17E-02 |
| 89 | GO:0009058: biosynthetic process | 3.71E-02 |
| 90 | GO:0009845: seed germination | 3.78E-02 |
| 91 | GO:0007165: signal transduction | 3.81E-02 |
| 92 | GO:0040008: regulation of growth | 4.34E-02 |
| 93 | GO:0009739: response to gibberellin | 4.86E-02 |
| 94 | GO:0007166: cell surface receptor signaling pathway | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 2 | GO:0008710: 8-amino-7-oxononanoate synthase activity | 0.00E+00 |
| 3 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 4 | GO:0016428: tRNA (cytosine-5-)-methyltransferase activity | 0.00E+00 |
| 5 | GO:0003725: double-stranded RNA binding | 1.63E-04 |
| 6 | GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity | 3.42E-04 |
| 7 | GO:0009041: uridylate kinase activity | 4.92E-04 |
| 8 | GO:0004519: endonuclease activity | 5.67E-04 |
| 9 | GO:0010328: auxin influx transmembrane transporter activity | 6.55E-04 |
| 10 | GO:0010011: auxin binding | 6.55E-04 |
| 11 | GO:0004784: superoxide dismutase activity | 1.01E-03 |
| 12 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.01E-03 |
| 13 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.20E-03 |
| 14 | GO:0004222: metalloendopeptidase activity | 1.29E-03 |
| 15 | GO:0004672: protein kinase activity | 1.46E-03 |
| 16 | GO:0004525: ribonuclease III activity | 1.63E-03 |
| 17 | GO:0003723: RNA binding | 2.92E-03 |
| 18 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 3.15E-03 |
| 19 | GO:0003779: actin binding | 3.49E-03 |
| 20 | GO:0003712: transcription cofactor activity | 4.03E-03 |
| 21 | GO:0004190: aspartic-type endopeptidase activity | 4.03E-03 |
| 22 | GO:0003714: transcription corepressor activity | 4.65E-03 |
| 23 | GO:0005345: purine nucleobase transmembrane transporter activity | 4.98E-03 |
| 24 | GO:0030170: pyridoxal phosphate binding | 4.98E-03 |
| 25 | GO:0005102: receptor binding | 6.73E-03 |
| 26 | GO:0019901: protein kinase binding | 8.26E-03 |
| 27 | GO:0008168: methyltransferase activity | 9.21E-03 |
| 28 | GO:0008483: transaminase activity | 1.03E-02 |
| 29 | GO:0005200: structural constituent of cytoskeleton | 1.03E-02 |
| 30 | GO:0005525: GTP binding | 1.17E-02 |
| 31 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.45E-02 |
| 32 | GO:0042803: protein homodimerization activity | 1.49E-02 |
| 33 | GO:0003993: acid phosphatase activity | 1.65E-02 |
| 34 | GO:0015293: symporter activity | 2.08E-02 |
| 35 | GO:0051287: NAD binding | 2.19E-02 |
| 36 | GO:0005524: ATP binding | 2.51E-02 |
| 37 | GO:0015171: amino acid transmembrane transporter activity | 2.55E-02 |
| 38 | GO:0004386: helicase activity | 3.24E-02 |
| 39 | GO:0004252: serine-type endopeptidase activity | 3.85E-02 |
| 40 | GO:0016787: hydrolase activity | 3.95E-02 |
| 41 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.27E-02 |