GO Enrichment Analysis of Co-expressed Genes with
AT3G60530
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071000: response to magnetism | 0.00E+00 |
| 2 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 3 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 4 | GO:0009583: detection of light stimulus | 0.00E+00 |
| 5 | GO:0007623: circadian rhythm | 6.04E-05 |
| 6 | GO:0072387: flavin adenine dinucleotide metabolic process | 7.39E-05 |
| 7 | GO:1902265: abscisic acid homeostasis | 7.39E-05 |
| 8 | GO:0010617: circadian regulation of calcium ion oscillation | 1.77E-04 |
| 9 | GO:0099402: plant organ development | 1.77E-04 |
| 10 | GO:0009662: etioplast organization | 1.77E-04 |
| 11 | GO:0001736: establishment of planar polarity | 1.77E-04 |
| 12 | GO:0010343: singlet oxygen-mediated programmed cell death | 1.77E-04 |
| 13 | GO:1901529: positive regulation of anion channel activity | 1.77E-04 |
| 14 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 2.99E-04 |
| 15 | GO:0031022: nuclear migration along microfilament | 2.99E-04 |
| 16 | GO:0051127: positive regulation of actin nucleation | 2.99E-04 |
| 17 | GO:1902448: positive regulation of shade avoidance | 2.99E-04 |
| 18 | GO:1901672: positive regulation of systemic acquired resistance | 2.99E-04 |
| 19 | GO:1901332: negative regulation of lateral root development | 4.32E-04 |
| 20 | GO:0032981: mitochondrial respiratory chain complex I assembly | 4.32E-04 |
| 21 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 4.32E-04 |
| 22 | GO:1902347: response to strigolactone | 5.75E-04 |
| 23 | GO:0009902: chloroplast relocation | 5.75E-04 |
| 24 | GO:0009734: auxin-activated signaling pathway | 6.18E-04 |
| 25 | GO:0046785: microtubule polymerization | 7.29E-04 |
| 26 | GO:0010117: photoprotection | 7.29E-04 |
| 27 | GO:0046283: anthocyanin-containing compound metabolic process | 7.29E-04 |
| 28 | GO:1902183: regulation of shoot apical meristem development | 7.29E-04 |
| 29 | GO:0016123: xanthophyll biosynthetic process | 7.29E-04 |
| 30 | GO:0032876: negative regulation of DNA endoreduplication | 7.29E-04 |
| 31 | GO:0010029: regulation of seed germination | 7.97E-04 |
| 32 | GO:0060918: auxin transport | 8.91E-04 |
| 33 | GO:0009959: negative gravitropism | 8.91E-04 |
| 34 | GO:1901371: regulation of leaf morphogenesis | 8.91E-04 |
| 35 | GO:0009903: chloroplast avoidance movement | 1.06E-03 |
| 36 | GO:0010310: regulation of hydrogen peroxide metabolic process | 1.06E-03 |
| 37 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.06E-03 |
| 38 | GO:0009637: response to blue light | 1.22E-03 |
| 39 | GO:0010444: guard mother cell differentiation | 1.24E-03 |
| 40 | GO:0051510: regulation of unidimensional cell growth | 1.24E-03 |
| 41 | GO:0010161: red light signaling pathway | 1.24E-03 |
| 42 | GO:0032875: regulation of DNA endoreduplication | 1.43E-03 |
| 43 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.43E-03 |
| 44 | GO:0042255: ribosome assembly | 1.43E-03 |
| 45 | GO:0009926: auxin polar transport | 1.56E-03 |
| 46 | GO:0010100: negative regulation of photomorphogenesis | 1.63E-03 |
| 47 | GO:0007389: pattern specification process | 1.63E-03 |
| 48 | GO:0010099: regulation of photomorphogenesis | 1.63E-03 |
| 49 | GO:2000024: regulation of leaf development | 1.83E-03 |
| 50 | GO:0006783: heme biosynthetic process | 1.83E-03 |
| 51 | GO:1900426: positive regulation of defense response to bacterium | 2.05E-03 |
| 52 | GO:0009638: phototropism | 2.05E-03 |
| 53 | GO:0009299: mRNA transcription | 2.28E-03 |
| 54 | GO:0048829: root cap development | 2.28E-03 |
| 55 | GO:0048765: root hair cell differentiation | 2.51E-03 |
| 56 | GO:0009740: gibberellic acid mediated signaling pathway | 2.78E-03 |
| 57 | GO:0030048: actin filament-based movement | 3.00E-03 |
| 58 | GO:0030036: actin cytoskeleton organization | 3.00E-03 |
| 59 | GO:0010075: regulation of meristem growth | 3.00E-03 |
| 60 | GO:0009725: response to hormone | 3.00E-03 |
| 61 | GO:0009785: blue light signaling pathway | 3.00E-03 |
| 62 | GO:0010143: cutin biosynthetic process | 3.25E-03 |
| 63 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.06E-03 |
| 64 | GO:2000377: regulation of reactive oxygen species metabolic process | 4.06E-03 |
| 65 | GO:0005992: trehalose biosynthetic process | 4.06E-03 |
| 66 | GO:0010187: negative regulation of seed germination | 4.06E-03 |
| 67 | GO:0006418: tRNA aminoacylation for protein translation | 4.34E-03 |
| 68 | GO:0003333: amino acid transmembrane transport | 4.63E-03 |
| 69 | GO:0009686: gibberellin biosynthetic process | 5.23E-03 |
| 70 | GO:0042127: regulation of cell proliferation | 5.54E-03 |
| 71 | GO:0016117: carotenoid biosynthetic process | 5.86E-03 |
| 72 | GO:0008380: RNA splicing | 6.03E-03 |
| 73 | GO:0010087: phloem or xylem histogenesis | 6.18E-03 |
| 74 | GO:0010118: stomatal movement | 6.18E-03 |
| 75 | GO:0009958: positive gravitropism | 6.51E-03 |
| 76 | GO:0042752: regulation of circadian rhythm | 6.84E-03 |
| 77 | GO:0009646: response to absence of light | 6.84E-03 |
| 78 | GO:0032502: developmental process | 7.89E-03 |
| 79 | GO:0007264: small GTPase mediated signal transduction | 7.89E-03 |
| 80 | GO:0071281: cellular response to iron ion | 8.25E-03 |
| 81 | GO:0010090: trichome morphogenesis | 8.25E-03 |
| 82 | GO:0010252: auxin homeostasis | 8.61E-03 |
| 83 | GO:0009723: response to ethylene | 9.05E-03 |
| 84 | GO:0016310: phosphorylation | 9.84E-03 |
| 85 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.00E-02 |
| 86 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.01E-02 |
| 87 | GO:0046777: protein autophosphorylation | 1.04E-02 |
| 88 | GO:0015995: chlorophyll biosynthetic process | 1.09E-02 |
| 89 | GO:0018298: protein-chromophore linkage | 1.17E-02 |
| 90 | GO:0000160: phosphorelay signal transduction system | 1.22E-02 |
| 91 | GO:0010311: lateral root formation | 1.22E-02 |
| 92 | GO:0010218: response to far red light | 1.26E-02 |
| 93 | GO:0006865: amino acid transport | 1.34E-02 |
| 94 | GO:0006631: fatty acid metabolic process | 1.57E-02 |
| 95 | GO:0008283: cell proliferation | 1.66E-02 |
| 96 | GO:0010114: response to red light | 1.66E-02 |
| 97 | GO:0009640: photomorphogenesis | 1.66E-02 |
| 98 | GO:0009644: response to high light intensity | 1.76E-02 |
| 99 | GO:0009736: cytokinin-activated signaling pathway | 2.05E-02 |
| 100 | GO:0009735: response to cytokinin | 2.33E-02 |
| 101 | GO:0048316: seed development | 2.37E-02 |
| 102 | GO:0009738: abscisic acid-activated signaling pathway | 2.47E-02 |
| 103 | GO:0009624: response to nematode | 2.64E-02 |
| 104 | GO:0051726: regulation of cell cycle | 2.75E-02 |
| 105 | GO:0009742: brassinosteroid mediated signaling pathway | 2.75E-02 |
| 106 | GO:0051301: cell division | 2.78E-02 |
| 107 | GO:0006633: fatty acid biosynthetic process | 3.64E-02 |
| 108 | GO:0040008: regulation of growth | 3.77E-02 |
| 109 | GO:0006414: translational elongation | 3.80E-02 |
| 110 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.22E-02 |
| 111 | GO:0010468: regulation of gene expression | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046608: carotenoid isomerase activity | 0.00E+00 |
| 2 | GO:0010313: phytochrome binding | 7.39E-05 |
| 3 | GO:0043425: bHLH transcription factor binding | 1.77E-04 |
| 4 | GO:0052722: fatty acid in-chain hydroxylase activity | 2.99E-04 |
| 5 | GO:0003727: single-stranded RNA binding | 3.42E-04 |
| 6 | GO:0017172: cysteine dioxygenase activity | 4.32E-04 |
| 7 | GO:0009882: blue light photoreceptor activity | 4.32E-04 |
| 8 | GO:0010011: auxin binding | 5.75E-04 |
| 9 | GO:0010328: auxin influx transmembrane transporter activity | 5.75E-04 |
| 10 | GO:0102391: decanoate--CoA ligase activity | 1.06E-03 |
| 11 | GO:0016301: kinase activity | 1.19E-03 |
| 12 | GO:0004467: long-chain fatty acid-CoA ligase activity | 1.24E-03 |
| 13 | GO:0071949: FAD binding | 1.83E-03 |
| 14 | GO:0009672: auxin:proton symporter activity | 2.05E-03 |
| 15 | GO:0004805: trehalose-phosphatase activity | 2.28E-03 |
| 16 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.51E-03 |
| 17 | GO:0010329: auxin efflux transmembrane transporter activity | 3.00E-03 |
| 18 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.25E-03 |
| 19 | GO:0004672: protein kinase activity | 4.52E-03 |
| 20 | GO:0004812: aminoacyl-tRNA ligase activity | 5.86E-03 |
| 21 | GO:0042802: identical protein binding | 6.43E-03 |
| 22 | GO:0008536: Ran GTPase binding | 6.51E-03 |
| 23 | GO:0000156: phosphorelay response regulator activity | 8.25E-03 |
| 24 | GO:0016759: cellulose synthase activity | 8.61E-03 |
| 25 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.26E-02 |
| 26 | GO:0003746: translation elongation factor activity | 1.39E-02 |
| 27 | GO:0005515: protein binding | 1.50E-02 |
| 28 | GO:0046983: protein dimerization activity | 1.70E-02 |
| 29 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.76E-02 |
| 30 | GO:0015293: symporter activity | 1.80E-02 |
| 31 | GO:0003690: double-stranded DNA binding | 2.10E-02 |
| 32 | GO:0015171: amino acid transmembrane transporter activity | 2.21E-02 |
| 33 | GO:0003779: actin binding | 2.58E-02 |
| 34 | GO:0004674: protein serine/threonine kinase activity | 2.79E-02 |
| 35 | GO:0003735: structural constituent of ribosome | 2.81E-02 |
| 36 | GO:0019843: rRNA binding | 3.10E-02 |
| 37 | GO:0008017: microtubule binding | 4.02E-02 |
| 38 | GO:0008194: UDP-glycosyltransferase activity | 4.22E-02 |