Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G60470

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002084: protein depalmitoylation0.00E+00
2GO:0032889: regulation of vacuole fusion, non-autophagic0.00E+00
3GO:0046865: terpenoid transport0.00E+00
4GO:0034756: regulation of iron ion transport0.00E+00
5GO:0006952: defense response4.24E-06
6GO:0010120: camalexin biosynthetic process1.02E-05
7GO:0051707: response to other organism2.02E-04
8GO:0031123: RNA 3'-end processing2.87E-04
9GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway2.87E-04
10GO:0015760: glucose-6-phosphate transport2.87E-04
11GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.87E-04
12GO:0010421: hydrogen peroxide-mediated programmed cell death2.87E-04
13GO:0009700: indole phytoalexin biosynthetic process2.87E-04
14GO:0010230: alternative respiration2.87E-04
15GO:0019673: GDP-mannose metabolic process2.87E-04
16GO:0042868: antisense RNA metabolic process2.87E-04
17GO:0046244: salicylic acid catabolic process2.87E-04
18GO:0002143: tRNA wobble position uridine thiolation2.87E-04
19GO:0098789: pre-mRNA cleavage required for polyadenylation2.87E-04
20GO:0042539: hypotonic salinity response2.87E-04
21GO:0009617: response to bacterium3.33E-04
22GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.98E-04
23GO:0008202: steroid metabolic process4.98E-04
24GO:0009870: defense response signaling pathway, resistance gene-dependent5.80E-04
25GO:0009805: coumarin biosynthetic process6.30E-04
26GO:0042853: L-alanine catabolic process6.30E-04
27GO:0035542: regulation of SNARE complex assembly6.30E-04
28GO:0015712: hexose phosphate transport6.30E-04
29GO:0043066: negative regulation of apoptotic process6.30E-04
30GO:0008535: respiratory chain complex IV assembly6.30E-04
31GO:0016197: endosomal transport6.30E-04
32GO:0009156: ribonucleoside monophosphate biosynthetic process6.30E-04
33GO:0035335: peptidyl-tyrosine dephosphorylation6.30E-04
34GO:0015709: thiosulfate transport6.30E-04
35GO:0031204: posttranslational protein targeting to membrane, translocation6.30E-04
36GO:0071422: succinate transmembrane transport6.30E-04
37GO:0009627: systemic acquired resistance6.63E-04
38GO:0009682: induced systemic resistance6.69E-04
39GO:0007165: signal transduction8.08E-04
40GO:0071494: cellular response to UV-C1.02E-03
41GO:0015692: lead ion transport1.02E-03
42GO:0060968: regulation of gene silencing1.02E-03
43GO:0015714: phosphoenolpyruvate transport1.02E-03
44GO:0080168: abscisic acid transport1.02E-03
45GO:0061158: 3'-UTR-mediated mRNA destabilization1.02E-03
46GO:0017006: protein-tetrapyrrole linkage1.02E-03
47GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.02E-03
48GO:0035436: triose phosphate transmembrane transport1.02E-03
49GO:0045836: positive regulation of meiotic nuclear division1.02E-03
50GO:0009225: nucleotide-sugar metabolic process1.09E-03
51GO:0010150: leaf senescence1.32E-03
52GO:0015729: oxaloacetate transport1.46E-03
53GO:0002239: response to oomycetes1.46E-03
54GO:0009584: detection of visible light1.46E-03
55GO:0010731: protein glutathionylation1.46E-03
56GO:0055089: fatty acid homeostasis1.46E-03
57GO:0000187: activation of MAPK activity1.46E-03
58GO:0006874: cellular calcium ion homeostasis1.47E-03
59GO:0009636: response to toxic substance1.72E-03
60GO:0009814: defense response, incompatible interaction1.77E-03
61GO:0071456: cellular response to hypoxia1.77E-03
62GO:0019748: secondary metabolic process1.77E-03
63GO:0071369: cellular response to ethylene stimulus1.93E-03
64GO:0010109: regulation of photosynthesis1.96E-03
65GO:0033320: UDP-D-xylose biosynthetic process1.96E-03
66GO:0006536: glutamate metabolic process1.96E-03
67GO:0010363: regulation of plant-type hypersensitive response1.96E-03
68GO:0015713: phosphoglycerate transport1.96E-03
69GO:0007112: male meiosis cytokinesis1.96E-03
70GO:0009165: nucleotide biosynthetic process1.96E-03
71GO:0045927: positive regulation of growth2.50E-03
72GO:0071423: malate transmembrane transport2.50E-03
73GO:0006544: glycine metabolic process2.50E-03
74GO:0009626: plant-type hypersensitive response2.91E-03
75GO:0006777: Mo-molybdopterin cofactor biosynthetic process3.08E-03
76GO:0042732: D-xylose metabolic process3.08E-03
77GO:0060918: auxin transport3.08E-03
78GO:0035435: phosphate ion transmembrane transport3.08E-03
79GO:0048579: negative regulation of long-day photoperiodism, flowering3.08E-03
80GO:0009643: photosynthetic acclimation3.08E-03
81GO:0006561: proline biosynthetic process3.08E-03
82GO:0006563: L-serine metabolic process3.08E-03
83GO:0002229: defense response to oomycetes3.26E-03
84GO:0031047: gene silencing by RNA3.48E-03
85GO:0016310: phosphorylation3.51E-03
86GO:0000911: cytokinesis by cell plate formation3.71E-03
87GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.71E-03
88GO:1900056: negative regulation of leaf senescence4.38E-03
89GO:2000014: regulation of endosperm development4.38E-03
90GO:0008272: sulfate transport4.38E-03
91GO:0010044: response to aluminum ion4.38E-03
92GO:0051607: defense response to virus4.44E-03
93GO:0042742: defense response to bacterium4.56E-03
94GO:0009819: drought recovery5.08E-03
95GO:1900150: regulation of defense response to fungus5.08E-03
96GO:0006102: isocitrate metabolic process5.08E-03
97GO:0006972: hyperosmotic response5.82E-03
98GO:0009699: phenylpropanoid biosynthetic process5.82E-03
99GO:0006002: fructose 6-phosphate metabolic process5.82E-03
100GO:0007186: G-protein coupled receptor signaling pathway5.82E-03
101GO:0001558: regulation of cell growth5.82E-03
102GO:0010204: defense response signaling pathway, resistance gene-independent5.82E-03
103GO:0010112: regulation of systemic acquired resistance6.60E-03
104GO:0048589: developmental growth6.60E-03
105GO:0009407: toxin catabolic process6.77E-03
106GO:0035999: tetrahydrofolate interconversion7.41E-03
107GO:0043069: negative regulation of programmed cell death8.26E-03
108GO:0009089: lysine biosynthetic process via diaminopimelate9.14E-03
109GO:0008361: regulation of cell size1.01E-02
110GO:0006790: sulfur compound metabolic process1.01E-02
111GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.10E-02
112GO:0030048: actin filament-based movement1.10E-02
113GO:0006626: protein targeting to mitochondrion1.10E-02
114GO:0009718: anthocyanin-containing compound biosynthetic process1.10E-02
115GO:0007034: vacuolar transport1.20E-02
116GO:0042343: indole glucosinolate metabolic process1.30E-02
117GO:0007030: Golgi organization1.30E-02
118GO:0010039: response to iron ion1.30E-02
119GO:0071732: cellular response to nitric oxide1.30E-02
120GO:0070588: calcium ion transmembrane transport1.30E-02
121GO:0046854: phosphatidylinositol phosphorylation1.30E-02
122GO:0007033: vacuole organization1.30E-02
123GO:0010053: root epidermal cell differentiation1.30E-02
124GO:0009809: lignin biosynthetic process1.36E-02
125GO:0006636: unsaturated fatty acid biosynthetic process1.40E-02
126GO:0009116: nucleoside metabolic process1.51E-02
127GO:0005992: trehalose biosynthetic process1.51E-02
128GO:0006487: protein N-linked glycosylation1.51E-02
129GO:0006096: glycolytic process1.61E-02
130GO:0043622: cortical microtubule organization1.62E-02
131GO:0098542: defense response to other organism1.73E-02
132GO:0048278: vesicle docking1.73E-02
133GO:0031408: oxylipin biosynthetic process1.73E-02
134GO:0051321: meiotic cell cycle1.73E-02
135GO:0009620: response to fungus1.77E-02
136GO:0010017: red or far-red light signaling pathway1.85E-02
137GO:0009625: response to insect1.96E-02
138GO:0009306: protein secretion2.08E-02
139GO:0010051: xylem and phloem pattern formation2.33E-02
140GO:0009960: endosperm development2.46E-02
141GO:0071472: cellular response to salt stress2.46E-02
142GO:0009958: positive gravitropism2.46E-02
143GO:0010197: polar nucleus fusion2.46E-02
144GO:0009751: response to salicylic acid2.51E-02
145GO:0048544: recognition of pollen2.59E-02
146GO:0061025: membrane fusion2.59E-02
147GO:0006623: protein targeting to vacuole2.72E-02
148GO:0009749: response to glucose2.72E-02
149GO:0010193: response to ozone2.86E-02
150GO:0000302: response to reactive oxygen species2.86E-02
151GO:0071281: cellular response to iron ion3.13E-02
152GO:1901657: glycosyl compound metabolic process3.13E-02
153GO:0006904: vesicle docking involved in exocytosis3.42E-02
154GO:0016579: protein deubiquitination3.57E-02
155GO:0050832: defense response to fungus3.66E-02
156GO:0001666: response to hypoxia3.72E-02
157GO:0006906: vesicle fusion4.02E-02
158GO:0006974: cellular response to DNA damage stimulus4.02E-02
159GO:0006888: ER to Golgi vesicle-mediated transport4.17E-02
160GO:0018298: protein-chromophore linkage4.49E-02
161GO:0008219: cell death4.49E-02
162GO:0006468: protein phosphorylation4.73E-02
163GO:0006499: N-terminal protein myristoylation4.81E-02
164GO:0009631: cold acclimation4.97E-02
RankGO TermAdjusted P value
1GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0008092: cytoskeletal protein binding0.00E+00
4GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
5GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
6GO:0050513: glycoprotein 2-beta-D-xylosyltransferase activity0.00E+00
7GO:0016301: kinase activity3.06E-07
8GO:0016621: cinnamoyl-CoA reductase activity2.24E-04
9GO:0008446: GDP-mannose 4,6-dehydratase activity2.87E-04
10GO:0010285: L,L-diaminopimelate aminotransferase activity2.87E-04
11GO:0008142: oxysterol binding3.49E-04
12GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity6.30E-04
13GO:0015152: glucose-6-phosphate transmembrane transporter activity6.30E-04
14GO:0015117: thiosulfate transmembrane transporter activity6.30E-04
15GO:0004338: glucan exo-1,3-beta-glucosidase activity6.30E-04
16GO:1901677: phosphate transmembrane transporter activity6.30E-04
17GO:0004566: beta-glucuronidase activity6.30E-04
18GO:0009883: red or far-red light photoreceptor activity6.30E-04
19GO:0030247: polysaccharide binding7.09E-04
20GO:0030170: pyridoxal phosphate binding9.50E-04
21GO:0005524: ATP binding9.68E-04
22GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.02E-03
23GO:0005310: dicarboxylic acid transmembrane transporter activity1.02E-03
24GO:0015141: succinate transmembrane transporter activity1.02E-03
25GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.02E-03
26GO:0008020: G-protein coupled photoreceptor activity1.02E-03
27GO:0071917: triose-phosphate transmembrane transporter activity1.02E-03
28GO:0004867: serine-type endopeptidase inhibitor activity1.09E-03
29GO:0005217: intracellular ligand-gated ion channel activity1.09E-03
30GO:0004970: ionotropic glutamate receptor activity1.09E-03
31GO:0004722: protein serine/threonine phosphatase activity1.26E-03
32GO:0004351: glutamate decarboxylase activity1.46E-03
33GO:0017077: oxidative phosphorylation uncoupler activity1.46E-03
34GO:0004749: ribose phosphate diphosphokinase activity1.46E-03
35GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.46E-03
36GO:0015131: oxaloacetate transmembrane transporter activity1.46E-03
37GO:0004449: isocitrate dehydrogenase (NAD+) activity1.46E-03
38GO:0004792: thiosulfate sulfurtransferase activity1.46E-03
39GO:0046527: glucosyltransferase activity1.96E-03
40GO:0004930: G-protein coupled receptor activity1.96E-03
41GO:0009916: alternative oxidase activity1.96E-03
42GO:0015120: phosphoglycerate transmembrane transporter activity1.96E-03
43GO:0008381: mechanically-gated ion channel activity2.50E-03
44GO:0008641: small protein activating enzyme activity2.50E-03
45GO:0004372: glycine hydroxymethyltransferase activity2.50E-03
46GO:0004888: transmembrane signaling receptor activity2.50E-03
47GO:0004040: amidase activity2.50E-03
48GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.50E-03
49GO:0042285: xylosyltransferase activity2.50E-03
50GO:0043531: ADP binding2.95E-03
51GO:0048040: UDP-glucuronate decarboxylase activity3.08E-03
52GO:0008474: palmitoyl-(protein) hydrolase activity3.08E-03
53GO:0070403: NAD+ binding3.71E-03
54GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.71E-03
55GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.19E-03
56GO:0102425: myricetin 3-O-glucosyltransferase activity4.38E-03
57GO:0102360: daphnetin 3-O-glucosyltransferase activity4.38E-03
58GO:0009881: photoreceptor activity4.38E-03
59GO:0003872: 6-phosphofructokinase activity4.38E-03
60GO:0015140: malate transmembrane transporter activity4.38E-03
61GO:0004620: phospholipase activity4.38E-03
62GO:0051213: dioxygenase activity4.70E-03
63GO:0008312: 7S RNA binding5.08E-03
64GO:0047893: flavonol 3-O-glucosyltransferase activity5.08E-03
65GO:0004525: ribonuclease III activity5.08E-03
66GO:0004708: MAP kinase kinase activity5.08E-03
67GO:0004714: transmembrane receptor protein tyrosine kinase activity5.08E-03
68GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen5.26E-03
69GO:0030246: carbohydrate binding7.13E-03
70GO:0004743: pyruvate kinase activity7.41E-03
71GO:0030955: potassium ion binding7.41E-03
72GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.78E-03
73GO:0004568: chitinase activity8.26E-03
74GO:0047372: acylglycerol lipase activity9.14E-03
75GO:0008559: xenobiotic-transporting ATPase activity9.14E-03
76GO:0042626: ATPase activity, coupled to transmembrane movement of substances9.25E-03
77GO:0004364: glutathione transferase activity9.65E-03
78GO:0015116: sulfate transmembrane transporter activity1.01E-02
79GO:0005388: calcium-transporting ATPase activity1.10E-02
80GO:0004565: beta-galactosidase activity1.10E-02
81GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.10E-02
82GO:0005315: inorganic phosphate transmembrane transporter activity1.10E-02
83GO:0000155: phosphorelay sensor kinase activity1.10E-02
84GO:0000287: magnesium ion binding1.16E-02
85GO:0003774: motor activity1.20E-02
86GO:0031624: ubiquitin conjugating enzyme binding1.20E-02
87GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.20E-02
88GO:0003712: transcription cofactor activity1.30E-02
89GO:0004725: protein tyrosine phosphatase activity1.40E-02
90GO:0005528: FK506 binding1.51E-02
91GO:0035251: UDP-glucosyltransferase activity1.73E-02
92GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.73E-02
93GO:0004707: MAP kinase activity1.73E-02
94GO:0080044: quercetin 7-O-glucosyltransferase activity1.77E-02
95GO:0080043: quercetin 3-O-glucosyltransferase activity1.77E-02
96GO:0022857: transmembrane transporter activity1.82E-02
97GO:0008810: cellulase activity1.96E-02
98GO:0004499: N,N-dimethylaniline monooxygenase activity2.08E-02
99GO:0003727: single-stranded RNA binding2.08E-02
100GO:0019825: oxygen binding2.60E-02
101GO:0004872: receptor activity2.72E-02
102GO:0046872: metal ion binding2.74E-02
103GO:0004843: thiol-dependent ubiquitin-specific protease activity2.86E-02
104GO:0015297: antiporter activity3.20E-02
105GO:0008483: transaminase activity3.42E-02
106GO:0008194: UDP-glycosyltransferase activity3.74E-02
107GO:0005509: calcium ion binding3.86E-02
108GO:0004674: protein serine/threonine kinase activity4.08E-02
109GO:0102483: scopolin beta-glucosidase activity4.17E-02
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Gene type



Gene DE type