co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G60450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0036503: ERAD pathway	0.00E+00
2	GO:0006497: protein lipidation	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0010055: atrichoblast differentiation	0.00E+00
5	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
6	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
7	GO:0006216: cytidine catabolic process	0.00E+00
8	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
9	GO:0010401: pectic galactan metabolic process	0.00E+00
10	GO:0010104: regulation of ethylene-activated signaling pathway	7.55E-05
11	GO:0002238: response to molecule of fungal origin	2.85E-04
12	GO:0032107: regulation of response to nutrient levels	4.84E-04
13	GO:0016337: single organismal cell-cell adhesion	4.84E-04
14	GO:0035352: NAD transmembrane transport	4.84E-04
15	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	4.84E-04
16	GO:0009700: indole phytoalexin biosynthetic process	4.84E-04
17	GO:0032491: detection of molecule of fungal origin	4.84E-04
18	GO:0042759: long-chain fatty acid biosynthetic process	4.84E-04
19	GO:0071446: cellular response to salicylic acid stimulus	4.90E-04
20	GO:0015031: protein transport	6.16E-04
21	GO:0006623: protein targeting to vacuole	8.76E-04
22	GO:0015780: nucleotide-sugar transport	8.92E-04
23	GO:0046939: nucleotide phosphorylation	1.04E-03
24	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	1.04E-03
25	GO:0006024: glycosaminoglycan biosynthetic process	1.04E-03
26	GO:1902066: regulation of cell wall pectin metabolic process	1.04E-03
27	GO:0048569: post-embryonic animal organ development	1.04E-03
28	GO:0052541: plant-type cell wall cellulose metabolic process	1.04E-03
29	GO:0002240: response to molecule of oomycetes origin	1.04E-03
30	GO:0010541: acropetal auxin transport	1.04E-03
31	GO:0019725: cellular homeostasis	1.04E-03
32	GO:0051252: regulation of RNA metabolic process	1.04E-03
33	GO:0015012: heparan sulfate proteoglycan biosynthetic process	1.04E-03
34	GO:0043132: NAD transport	1.04E-03
35	GO:0006996: organelle organization	1.04E-03
36	GO:0009156: ribonucleoside monophosphate biosynthetic process	1.04E-03
37	GO:1900426: positive regulation of defense response to bacterium	1.05E-03
38	GO:0090332: stomatal closure	1.05E-03
39	GO:0048268: clathrin coat assembly	1.05E-03
40	GO:0008202: steroid metabolic process	1.05E-03
41	GO:0009816: defense response to bacterium, incompatible interaction	1.63E-03
42	GO:0010186: positive regulation of cellular defense response	1.70E-03
43	GO:0015783: GDP-fucose transport	1.70E-03
44	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	1.70E-03
45	GO:0010272: response to silver ion	1.70E-03
46	GO:0048586: regulation of long-day photoperiodism, flowering	1.70E-03
47	GO:0032922: circadian regulation of gene expression	1.70E-03
48	GO:0071367: cellular response to brassinosteroid stimulus	1.70E-03
49	GO:0017006: protein-tetrapyrrole linkage	1.70E-03
50	GO:1901672: positive regulation of systemic acquired resistance	1.70E-03
51	GO:0051176: positive regulation of sulfur metabolic process	1.70E-03
52	GO:0090630: activation of GTPase activity	1.70E-03
53	GO:0009627: systemic acquired resistance	1.75E-03
54	GO:0010102: lateral root morphogenesis	1.84E-03
55	GO:0002237: response to molecule of bacterial origin	2.07E-03
56	GO:0009225: nucleotide-sugar metabolic process	2.32E-03
57	GO:0070301: cellular response to hydrogen peroxide	2.47E-03
58	GO:0009584: detection of visible light	2.47E-03
59	GO:0072334: UDP-galactose transmembrane transport	2.47E-03
60	GO:0010731: protein glutathionylation	2.47E-03
61	GO:0046739: transport of virus in multicellular host	2.47E-03
62	GO:1902290: positive regulation of defense response to oomycetes	2.47E-03
63	GO:0046513: ceramide biosynthetic process	2.47E-03
64	GO:0032877: positive regulation of DNA endoreduplication	2.47E-03
65	GO:0055089: fatty acid homeostasis	2.47E-03
66	GO:0060548: negative regulation of cell death	3.32E-03
67	GO:0045227: capsule polysaccharide biosynthetic process	3.32E-03
68	GO:0033320: UDP-D-xylose biosynthetic process	3.32E-03
69	GO:0033358: UDP-L-arabinose biosynthetic process	3.32E-03
70	GO:0033356: UDP-L-arabinose metabolic process	3.32E-03
71	GO:0006878: cellular copper ion homeostasis	3.32E-03
72	GO:0009165: nucleotide biosynthetic process	3.32E-03
73	GO:0016998: cell wall macromolecule catabolic process	3.49E-03
74	GO:0009814: defense response, incompatible interaction	3.82E-03
75	GO:0006012: galactose metabolic process	4.17E-03
76	GO:0009435: NAD biosynthetic process	4.26E-03
77	GO:0006665: sphingolipid metabolic process	4.26E-03
78	GO:0000304: response to singlet oxygen	4.26E-03
79	GO:0098719: sodium ion import across plasma membrane	4.26E-03
80	GO:0031365: N-terminal protein amino acid modification	4.26E-03
81	GO:0042147: retrograde transport, endosome to Golgi	4.92E-03
82	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	5.27E-03
83	GO:0042732: D-xylose metabolic process	5.27E-03
84	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	5.27E-03
85	GO:0045040: protein import into mitochondrial outer membrane	5.27E-03
86	GO:0006139: nucleobase-containing compound metabolic process	5.27E-03
87	GO:0042176: regulation of protein catabolic process	5.27E-03
88	GO:0003006: developmental process involved in reproduction	5.27E-03
89	GO:0010337: regulation of salicylic acid metabolic process	5.27E-03
90	GO:0009643: photosynthetic acclimation	5.27E-03
91	GO:0009972: cytidine deamination	5.27E-03
92	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	6.36E-03
93	GO:0010183: pollen tube guidance	6.62E-03
94	GO:0006891: intra-Golgi vesicle-mediated transport	7.10E-03
95	GO:0009610: response to symbiotic fungus	7.52E-03
96	GO:0046470: phosphatidylcholine metabolic process	7.52E-03
97	GO:0007050: cell cycle arrest	7.52E-03
98	GO:1900056: negative regulation of leaf senescence	7.52E-03
99	GO:0080186: developmental vegetative growth	7.52E-03
100	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	7.52E-03
101	GO:2000014: regulation of endosperm development	7.52E-03
102	GO:0006914: autophagy	8.62E-03
103	GO:0006102: isocitrate metabolic process	8.76E-03
104	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	8.76E-03
105	GO:1900150: regulation of defense response to fungus	8.76E-03
106	GO:2000070: regulation of response to water deprivation	8.76E-03
107	GO:2000031: regulation of salicylic acid mediated signaling pathway	1.01E-02
108	GO:0001558: regulation of cell growth	1.01E-02
109	GO:0006367: transcription initiation from RNA polymerase II promoter	1.01E-02
110	GO:0010120: camalexin biosynthetic process	1.01E-02
111	GO:0010204: defense response signaling pathway, resistance gene-independent	1.01E-02
112	GO:0009615: response to virus	1.03E-02
113	GO:0007338: single fertilization	1.14E-02
114	GO:0010112: regulation of systemic acquired resistance	1.14E-02
115	GO:0006950: response to stress	1.22E-02
116	GO:0051453: regulation of intracellular pH	1.29E-02
117	GO:0008219: cell death	1.35E-02
118	GO:0000103: sulfate assimilation	1.44E-02
119	GO:0006032: chitin catabolic process	1.44E-02
120	GO:0043069: negative regulation of programmed cell death	1.44E-02
121	GO:0050832: defense response to fungus	1.49E-02
122	GO:0045454: cell redox homeostasis	1.54E-02
123	GO:0048527: lateral root development	1.56E-02
124	GO:0000272: polysaccharide catabolic process	1.59E-02
125	GO:0006886: intracellular protein transport	1.61E-02
126	GO:0006790: sulfur compound metabolic process	1.75E-02
127	GO:0016925: protein sumoylation	1.75E-02
128	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.75E-02
129	GO:0010150: leaf senescence	1.85E-02
130	GO:0050826: response to freezing	1.92E-02
131	GO:0055046: microgametogenesis	1.92E-02
132	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.92E-02
133	GO:0006626: protein targeting to mitochondrion	1.92E-02
134	GO:2000028: regulation of photoperiodism, flowering	1.92E-02
135	GO:0006897: endocytosis	2.04E-02
136	GO:0051707: response to other organism	2.21E-02
137	GO:0046854: phosphatidylinositol phosphorylation	2.27E-02
138	GO:0070588: calcium ion transmembrane transport	2.27E-02
139	GO:0000209: protein polyubiquitination	2.30E-02
140	GO:0008643: carbohydrate transport	2.40E-02
141	GO:0006636: unsaturated fatty acid biosynthetic process	2.45E-02
142	GO:0034976: response to endoplasmic reticulum stress	2.45E-02
143	GO:0009116: nucleoside metabolic process	2.64E-02
144	GO:0006289: nucleotide-excision repair	2.64E-02
145	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.68E-02
146	GO:0051302: regulation of cell division	2.83E-02
147	GO:0007017: microtubule-based process	2.83E-02
148	GO:0006486: protein glycosylation	2.98E-02
149	GO:0006334: nucleosome assembly	3.03E-02
150	GO:0010017: red or far-red light signaling pathway	3.23E-02
151	GO:0016226: iron-sulfur cluster assembly	3.23E-02
152	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.23E-02
153	GO:0080092: regulation of pollen tube growth	3.23E-02
154	GO:0009625: response to insect	3.44E-02
155	GO:0010227: floral organ abscission	3.44E-02
156	GO:0071215: cellular response to abscisic acid stimulus	3.44E-02
157	GO:0071369: cellular response to ethylene stimulus	3.44E-02
158	GO:0006508: proteolysis	3.58E-02
159	GO:0009620: response to fungus	3.87E-02
160	GO:0042391: regulation of membrane potential	4.08E-02
161	GO:0008033: tRNA processing	4.08E-02
162	GO:0010087: phloem or xylem histogenesis	4.08E-02
163	GO:0006885: regulation of pH	4.31E-02
164	GO:0009960: endosperm development	4.31E-02
165	GO:0006662: glycerol ether metabolic process	4.31E-02
166	GO:0018105: peptidyl-serine phosphorylation	4.36E-02
167	GO:0016192: vesicle-mediated transport	4.44E-02
168	GO:0006814: sodium ion transport	4.54E-02
169	GO:0009738: abscisic acid-activated signaling pathway	4.63E-02
170	GO:0046686: response to cadmium ion	4.73E-02
171	GO:0016310: phosphorylation	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0008752: FMN reductase activity	0.00E+00
2	GO:0034338: short-chain carboxylesterase activity	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0018580: nitronate monooxygenase activity	0.00E+00
5	GO:0019205: nucleobase-containing compound kinase activity	0.00E+00
6	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
7	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
8	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
9	GO:0008734: L-aspartate oxidase activity	0.00E+00
10	GO:0051670: inulinase activity	0.00E+00
11	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
12	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
13	GO:0047844: deoxycytidine deaminase activity	0.00E+00
14	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
15	GO:0005212: structural constituent of eye lens	0.00E+00
16	GO:0019779: Atg8 activating enzyme activity	1.03E-05
17	GO:0000824: inositol tetrakisphosphate 3-kinase activity	4.84E-04
18	GO:0047326: inositol tetrakisphosphate 5-kinase activity	4.84E-04
19	GO:0051669: fructan beta-fructosidase activity	4.84E-04
20	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	4.84E-04
21	GO:0031219: levanase activity	4.84E-04
22	GO:0019786: Atg8-specific protease activity	4.84E-04
23	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	4.84E-04
24	GO:0004649: poly(ADP-ribose) glycohydrolase activity	4.84E-04
25	GO:0008142: oxysterol binding	7.45E-04
26	GO:0004630: phospholipase D activity	7.45E-04
27	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	7.45E-04
28	GO:0050291: sphingosine N-acyltransferase activity	1.04E-03
29	GO:0009883: red or far-red light photoreceptor activity	1.04E-03
30	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	1.04E-03
31	GO:0051724: NAD transporter activity	1.04E-03
32	GO:0008428: ribonuclease inhibitor activity	1.04E-03
33	GO:1990585: hydroxyproline O-arabinosyltransferase activity	1.04E-03
34	GO:0032934: sterol binding	1.04E-03
35	GO:0008805: carbon-monoxide oxygenase activity	1.04E-03
36	GO:0004338: glucan exo-1,3-beta-glucosidase activity	1.04E-03
37	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	1.04E-03
38	GO:0004568: chitinase activity	1.22E-03
39	GO:0005545: 1-phosphatidylinositol binding	1.22E-03
40	GO:0005457: GDP-fucose transmembrane transporter activity	1.70E-03
41	GO:0000030: mannosyltransferase activity	1.70E-03
42	GO:0042409: caffeoyl-CoA O-methyltransferase activity	1.70E-03
43	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.70E-03
44	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.70E-03
45	GO:0008020: G-protein coupled photoreceptor activity	1.70E-03
46	GO:0016595: glutamate binding	1.70E-03
47	GO:0022857: transmembrane transporter activity	1.71E-03
48	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	2.47E-03
49	GO:0004749: ribose phosphate diphosphokinase activity	2.47E-03
50	GO:0019201: nucleotide kinase activity	2.47E-03
51	GO:0035529: NADH pyrophosphatase activity	2.47E-03
52	GO:0004449: isocitrate dehydrogenase (NAD+) activity	2.47E-03
53	GO:0050373: UDP-arabinose 4-epimerase activity	3.32E-03
54	GO:0019776: Atg8 ligase activity	3.32E-03
55	GO:0005459: UDP-galactose transmembrane transporter activity	4.26E-03
56	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	4.26E-03
57	GO:0004623: phospholipase A2 activity	4.26E-03
58	GO:0008948: oxaloacetate decarboxylase activity	4.26E-03
59	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	4.26E-03
60	GO:0031386: protein tag	4.26E-03
61	GO:0047631: ADP-ribose diphosphatase activity	4.26E-03
62	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.26E-03
63	GO:0047134: protein-disulfide reductase activity	4.92E-03
64	GO:0048040: UDP-glucuronate decarboxylase activity	5.27E-03
65	GO:0047714: galactolipase activity	5.27E-03
66	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	5.27E-03
67	GO:0000210: NAD+ diphosphatase activity	5.27E-03
68	GO:0035252: UDP-xylosyltransferase activity	5.27E-03
69	GO:0030276: clathrin binding	5.74E-03
70	GO:0004527: exonuclease activity	5.74E-03
71	GO:0004791: thioredoxin-disulfide reductase activity	6.17E-03
72	GO:0010181: FMN binding	6.17E-03
73	GO:0051920: peroxiredoxin activity	6.36E-03
74	GO:0070403: NAD+ binding	6.36E-03
75	GO:0004126: cytidine deaminase activity	6.36E-03
76	GO:0004017: adenylate kinase activity	6.36E-03
77	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	6.36E-03
78	GO:0003950: NAD+ ADP-ribosyltransferase activity	6.36E-03
79	GO:0004656: procollagen-proline 4-dioxygenase activity	6.36E-03
80	GO:0003978: UDP-glucose 4-epimerase activity	6.36E-03
81	GO:0005338: nucleotide-sugar transmembrane transporter activity	7.52E-03
82	GO:0008235: metalloexopeptidase activity	7.52E-03
83	GO:0009881: photoreceptor activity	7.52E-03
84	GO:0008320: protein transmembrane transporter activity	7.52E-03
85	GO:0015385: sodium:proton antiporter activity	8.09E-03
86	GO:0016209: antioxidant activity	8.76E-03
87	GO:0004034: aldose 1-epimerase activity	8.76E-03
88	GO:0004525: ribonuclease III activity	8.76E-03
89	GO:0005544: calcium-dependent phospholipid binding	8.76E-03
90	GO:0004708: MAP kinase kinase activity	8.76E-03
91	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	9.16E-03
92	GO:0046872: metal ion binding	9.80E-03
93	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.01E-02
94	GO:0051213: dioxygenase activity	1.03E-02
95	GO:0004806: triglyceride lipase activity	1.22E-02
96	GO:0031490: chromatin DNA binding	1.29E-02
97	GO:0016491: oxidoreductase activity	1.38E-02
98	GO:0030234: enzyme regulator activity	1.44E-02
99	GO:0008171: O-methyltransferase activity	1.44E-02
100	GO:0008047: enzyme activator activity	1.44E-02
101	GO:0004222: metalloendopeptidase activity	1.49E-02
102	GO:0030145: manganese ion binding	1.56E-02
103	GO:0015386: potassium:proton antiporter activity	1.59E-02
104	GO:0004177: aminopeptidase activity	1.59E-02
105	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.71E-02
106	GO:0015297: antiporter activity	1.74E-02
107	GO:0000049: tRNA binding	1.75E-02
108	GO:0031072: heat shock protein binding	1.92E-02
109	GO:0000155: phosphorelay sensor kinase activity	1.92E-02
110	GO:0005388: calcium-transporting ATPase activity	1.92E-02
111	GO:0004565: beta-galactosidase activity	1.92E-02
112	GO:0031624: ubiquitin conjugating enzyme binding	2.09E-02
113	GO:0004175: endopeptidase activity	2.09E-02
114	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.09E-02
115	GO:0030552: cAMP binding	2.27E-02
116	GO:0004867: serine-type endopeptidase inhibitor activity	2.27E-02
117	GO:0030553: cGMP binding	2.27E-02
118	GO:0008061: chitin binding	2.27E-02
119	GO:0003712: transcription cofactor activity	2.27E-02
120	GO:0031418: L-ascorbic acid binding	2.64E-02
121	GO:0001046: core promoter sequence-specific DNA binding	2.64E-02
122	GO:0005216: ion channel activity	2.83E-02
123	GO:0008408: 3'-5' exonuclease activity	3.03E-02
124	GO:0035251: UDP-glucosyltransferase activity	3.03E-02
125	GO:0005516: calmodulin binding	3.31E-02
126	GO:0008810: cellulase activity	3.44E-02
127	GO:0003756: protein disulfide isomerase activity	3.65E-02
128	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.65E-02
129	GO:0016787: hydrolase activity	3.76E-02
130	GO:0005102: receptor binding	3.86E-02
131	GO:0005249: voltage-gated potassium channel activity	4.08E-02
132	GO:0008233: peptidase activity	4.08E-02
133	GO:0030551: cyclic nucleotide binding	4.08E-02
134	GO:0005451: monovalent cation:proton antiporter activity	4.08E-02
135	GO:0004497: monooxygenase activity	4.17E-02
136	GO:0001085: RNA polymerase II transcription factor binding	4.31E-02
137	GO:0016853: isomerase activity	4.54E-02
138	GO:0015299: solute:proton antiporter activity	4.54E-02
139	GO:0005509: calcium ion binding	4.71E-02