Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G59150

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046865: terpenoid transport0.00E+00
2GO:0010793: regulation of mRNA export from nucleus0.00E+00
3GO:0034756: regulation of iron ion transport0.00E+00
4GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
5GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
6GO:0036258: multivesicular body assembly0.00E+00
7GO:0002084: protein depalmitoylation0.00E+00
8GO:0006623: protein targeting to vacuole2.01E-05
9GO:1900056: negative regulation of leaf senescence2.19E-04
10GO:0019673: GDP-mannose metabolic process2.82E-04
11GO:0042868: antisense RNA metabolic process2.82E-04
12GO:0098789: pre-mRNA cleavage required for polyadenylation2.82E-04
13GO:0031123: RNA 3'-end processing2.82E-04
14GO:0015760: glucose-6-phosphate transport2.82E-04
15GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.82E-04
16GO:0009700: indole phytoalexin biosynthetic process2.82E-04
17GO:0010230: alternative respiration2.82E-04
18GO:0010120: camalexin biosynthetic process3.40E-04
19GO:0051252: regulation of RNA metabolic process6.19E-04
20GO:0009156: ribonucleoside monophosphate biosynthetic process6.19E-04
21GO:0015709: thiosulfate transport6.19E-04
22GO:0071422: succinate transmembrane transport6.19E-04
23GO:0046939: nucleotide phosphorylation6.19E-04
24GO:1902066: regulation of cell wall pectin metabolic process6.19E-04
25GO:0050684: regulation of mRNA processing6.19E-04
26GO:0042853: L-alanine catabolic process6.19E-04
27GO:0015712: hexose phosphate transport6.19E-04
28GO:1901672: positive regulation of systemic acquired resistance1.00E-03
29GO:0048586: regulation of long-day photoperiodism, flowering1.00E-03
30GO:0032922: circadian regulation of gene expression1.00E-03
31GO:0032784: regulation of DNA-templated transcription, elongation1.00E-03
32GO:0061158: 3'-UTR-mediated mRNA destabilization1.00E-03
33GO:0017006: protein-tetrapyrrole linkage1.00E-03
34GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.00E-03
35GO:0035436: triose phosphate transmembrane transport1.00E-03
36GO:0045836: positive regulation of meiotic nuclear division1.00E-03
37GO:0015783: GDP-fucose transport1.00E-03
38GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.00E-03
39GO:0015692: lead ion transport1.00E-03
40GO:0060968: regulation of gene silencing1.00E-03
41GO:0015714: phosphoenolpyruvate transport1.00E-03
42GO:0080168: abscisic acid transport1.00E-03
43GO:0009225: nucleotide-sugar metabolic process1.06E-03
44GO:0010731: protein glutathionylation1.44E-03
45GO:0070676: intralumenal vesicle formation1.44E-03
46GO:0032877: positive regulation of DNA endoreduplication1.44E-03
47GO:0055089: fatty acid homeostasis1.44E-03
48GO:0000187: activation of MAPK activity1.44E-03
49GO:0015729: oxaloacetate transport1.44E-03
50GO:0009584: detection of visible light1.44E-03
51GO:0010104: regulation of ethylene-activated signaling pathway1.44E-03
52GO:0009814: defense response, incompatible interaction1.72E-03
53GO:0009165: nucleotide biosynthetic process1.92E-03
54GO:0010109: regulation of photosynthesis1.92E-03
55GO:0033320: UDP-D-xylose biosynthetic process1.92E-03
56GO:0006536: glutamate metabolic process1.92E-03
57GO:0010363: regulation of plant-type hypersensitive response1.92E-03
58GO:0015713: phosphoglycerate transport1.92E-03
59GO:0009435: NAD biosynthetic process2.46E-03
60GO:0045927: positive regulation of growth2.46E-03
61GO:0071423: malate transmembrane transport2.46E-03
62GO:0060918: auxin transport3.03E-03
63GO:0035435: phosphate ion transmembrane transport3.03E-03
64GO:0009643: photosynthetic acclimation3.03E-03
65GO:0006561: proline biosynthetic process3.03E-03
66GO:0042732: D-xylose metabolic process3.03E-03
67GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity3.03E-03
68GO:0042176: regulation of protein catabolic process3.03E-03
69GO:0006904: vesicle docking involved in exocytosis4.08E-03
70GO:0007050: cell cycle arrest4.30E-03
71GO:0080186: developmental vegetative growth4.30E-03
72GO:2000014: regulation of endosperm development4.30E-03
73GO:0008272: sulfate transport4.30E-03
74GO:0051607: defense response to virus4.33E-03
75GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.99E-03
76GO:0009819: drought recovery4.99E-03
77GO:0009627: systemic acquired resistance5.12E-03
78GO:0006002: fructose 6-phosphate metabolic process5.72E-03
79GO:0007165: signal transduction6.46E-03
80GO:0010112: regulation of systemic acquired resistance6.48E-03
81GO:0048589: developmental growth6.48E-03
82GO:0015780: nucleotide-sugar transport6.48E-03
83GO:0009631: cold acclimation6.92E-03
84GO:0015031: protein transport6.94E-03
85GO:0008202: steroid metabolic process7.28E-03
86GO:0048268: clathrin coat assembly7.28E-03
87GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.28E-03
88GO:0009870: defense response signaling pathway, resistance gene-dependent8.11E-03
89GO:0043069: negative regulation of programmed cell death8.11E-03
90GO:0009089: lysine biosynthetic process via diaminopimelate8.97E-03
91GO:0006887: exocytosis9.03E-03
92GO:0006952: defense response9.21E-03
93GO:0051707: response to other organism9.80E-03
94GO:0016925: protein sumoylation9.88E-03
95GO:0006890: retrograde vesicle-mediated transport, Golgi to ER9.88E-03
96GO:0006626: protein targeting to mitochondrion1.08E-02
97GO:2000028: regulation of photoperiodism, flowering1.08E-02
98GO:0009718: anthocyanin-containing compound biosynthetic process1.08E-02
99GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.08E-02
100GO:0009636: response to toxic substance1.10E-02
101GO:0010039: response to iron ion1.28E-02
102GO:0071732: cellular response to nitric oxide1.28E-02
103GO:0070588: calcium ion transmembrane transport1.28E-02
104GO:0010053: root epidermal cell differentiation1.28E-02
105GO:0042343: indole glucosinolate metabolic process1.28E-02
106GO:0006636: unsaturated fatty acid biosynthetic process1.38E-02
107GO:0005992: trehalose biosynthetic process1.48E-02
108GO:0009116: nucleoside metabolic process1.48E-02
109GO:0006096: glycolytic process1.57E-02
110GO:0006874: cellular calcium ion homeostasis1.59E-02
111GO:0009626: plant-type hypersensitive response1.67E-02
112GO:0031408: oxylipin biosynthetic process1.70E-02
113GO:0051321: meiotic cell cycle1.70E-02
114GO:0098542: defense response to other organism1.70E-02
115GO:2000022: regulation of jasmonic acid mediated signaling pathway1.81E-02
116GO:0030433: ubiquitin-dependent ERAD pathway1.81E-02
117GO:0080092: regulation of pollen tube growth1.81E-02
118GO:0071456: cellular response to hypoxia1.81E-02
119GO:0010017: red or far-red light signaling pathway1.81E-02
120GO:0071369: cellular response to ethylene stimulus1.93E-02
121GO:0009625: response to insect1.93E-02
122GO:0010227: floral organ abscission1.93E-02
123GO:0006012: galactose metabolic process1.93E-02
124GO:0042147: retrograde transport, endosome to Golgi2.17E-02
125GO:0010051: xylem and phloem pattern formation2.29E-02
126GO:0009960: endosperm development2.42E-02
127GO:0009958: positive gravitropism2.42E-02
128GO:0016310: phosphorylation2.45E-02
129GO:0048544: recognition of pollen2.54E-02
130GO:0009749: response to glucose2.67E-02
131GO:0055072: iron ion homeostasis2.67E-02
132GO:0010183: pollen tube guidance2.67E-02
133GO:0010193: response to ozone2.81E-02
134GO:0000302: response to reactive oxygen species2.81E-02
135GO:0006891: intra-Golgi vesicle-mediated transport2.81E-02
136GO:0002229: defense response to oomycetes2.81E-02
137GO:0031047: gene silencing by RNA2.94E-02
138GO:0030163: protein catabolic process3.08E-02
139GO:0071281: cellular response to iron ion3.08E-02
140GO:0010150: leaf senescence3.27E-02
141GO:0000910: cytokinesis3.50E-02
142GO:0001666: response to hypoxia3.65E-02
143GO:0006888: ER to Golgi vesicle-mediated transport4.10E-02
144GO:0042742: defense response to bacterium4.17E-02
145GO:0018298: protein-chromophore linkage4.41E-02
146GO:0008219: cell death4.41E-02
147GO:0006468: protein phosphorylation4.49E-02
148GO:0009407: toxin catabolic process4.72E-02
149GO:0006499: N-terminal protein myristoylation4.72E-02
RankGO TermAdjusted P value
1GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
2GO:0008734: L-aspartate oxidase activity0.00E+00
3GO:0051670: inulinase activity0.00E+00
4GO:0008092: cytoskeletal protein binding0.00E+00
5GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
6GO:0031219: levanase activity2.82E-04
7GO:0010285: L,L-diaminopimelate aminotransferase activity2.82E-04
8GO:0051669: fructan beta-fructosidase activity2.82E-04
9GO:0008446: GDP-mannose 4,6-dehydratase activity2.82E-04
10GO:0016301: kinase activity3.50E-04
11GO:0015117: thiosulfate transmembrane transporter activity6.19E-04
12GO:0008428: ribonuclease inhibitor activity6.19E-04
13GO:0004338: glucan exo-1,3-beta-glucosidase activity6.19E-04
14GO:1901677: phosphate transmembrane transporter activity6.19E-04
15GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity6.19E-04
16GO:0004566: beta-glucuronidase activity6.19E-04
17GO:0009883: red or far-red light photoreceptor activity6.19E-04
18GO:0015152: glucose-6-phosphate transmembrane transporter activity6.19E-04
19GO:0030247: polysaccharide binding6.87E-04
20GO:0008020: G-protein coupled photoreceptor activity1.00E-03
21GO:0071917: triose-phosphate transmembrane transporter activity1.00E-03
22GO:0005457: GDP-fucose transmembrane transporter activity1.00E-03
23GO:0005310: dicarboxylic acid transmembrane transporter activity1.00E-03
24GO:0015141: succinate transmembrane transporter activity1.00E-03
25GO:0004867: serine-type endopeptidase inhibitor activity1.06E-03
26GO:0004351: glutamate decarboxylase activity1.44E-03
27GO:0017077: oxidative phosphorylation uncoupler activity1.44E-03
28GO:0004749: ribose phosphate diphosphokinase activity1.44E-03
29GO:0019201: nucleotide kinase activity1.44E-03
30GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.44E-03
31GO:0015131: oxaloacetate transmembrane transporter activity1.44E-03
32GO:0009916: alternative oxidase activity1.92E-03
33GO:0015120: phosphoglycerate transmembrane transporter activity1.92E-03
34GO:0004040: amidase activity2.46E-03
35GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.46E-03
36GO:0031386: protein tag2.46E-03
37GO:0008948: oxaloacetate decarboxylase activity2.46E-03
38GO:0043531: ADP binding2.84E-03
39GO:0035252: UDP-xylosyltransferase activity3.03E-03
40GO:0048040: UDP-glucuronate decarboxylase activity3.03E-03
41GO:0008474: palmitoyl-(protein) hydrolase activity3.03E-03
42GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity3.03E-03
43GO:0004017: adenylate kinase activity3.65E-03
44GO:0004656: procollagen-proline 4-dioxygenase activity3.65E-03
45GO:0070403: NAD+ binding3.65E-03
46GO:0005509: calcium ion binding3.70E-03
47GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity4.08E-03
48GO:0004620: phospholipase activity4.30E-03
49GO:0102425: myricetin 3-O-glucosyltransferase activity4.30E-03
50GO:0102360: daphnetin 3-O-glucosyltransferase activity4.30E-03
51GO:0016621: cinnamoyl-CoA reductase activity4.30E-03
52GO:0009881: photoreceptor activity4.30E-03
53GO:0003872: 6-phosphofructokinase activity4.30E-03
54GO:0015140: malate transmembrane transporter activity4.30E-03
55GO:0004525: ribonuclease III activity4.99E-03
56GO:0004708: MAP kinase kinase activity4.99E-03
57GO:0004034: aldose 1-epimerase activity4.99E-03
58GO:0047893: flavonol 3-O-glucosyltransferase activity4.99E-03
59GO:0030170: pyridoxal phosphate binding5.00E-03
60GO:0005524: ATP binding5.18E-03
61GO:0008142: oxysterol binding5.72E-03
62GO:0015297: antiporter activity6.22E-03
63GO:0046872: metal ion binding7.16E-03
64GO:0031490: chromatin DNA binding7.28E-03
65GO:0030955: potassium ion binding7.28E-03
66GO:0004743: pyruvate kinase activity7.28E-03
67GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors7.59E-03
68GO:0030234: enzyme regulator activity8.11E-03
69GO:0004568: chitinase activity8.11E-03
70GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity8.11E-03
71GO:0005545: 1-phosphatidylinositol binding8.11E-03
72GO:0008559: xenobiotic-transporting ATPase activity8.97E-03
73GO:0047372: acylglycerol lipase activity8.97E-03
74GO:0015116: sulfate transmembrane transporter activity9.88E-03
75GO:0035091: phosphatidylinositol binding1.06E-02
76GO:0005315: inorganic phosphate transmembrane transporter activity1.08E-02
77GO:0000155: phosphorelay sensor kinase activity1.08E-02
78GO:0005388: calcium-transporting ATPase activity1.08E-02
79GO:0004565: beta-galactosidase activity1.08E-02
80GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.08E-02
81GO:0000287: magnesium ion binding1.12E-02
82GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.18E-02
83GO:0031624: ubiquitin conjugating enzyme binding1.18E-02
84GO:0005217: intracellular ligand-gated ion channel activity1.28E-02
85GO:0003712: transcription cofactor activity1.28E-02
86GO:0004970: ionotropic glutamate receptor activity1.28E-02
87GO:0031625: ubiquitin protein ligase binding1.47E-02
88GO:0031418: L-ascorbic acid binding1.48E-02
89GO:0043130: ubiquitin binding1.48E-02
90GO:0008408: 3'-5' exonuclease activity1.70E-02
91GO:0035251: UDP-glucosyltransferase activity1.70E-02
92GO:0022857: transmembrane transporter activity1.78E-02
93GO:0008810: cellulase activity1.93E-02
94GO:0003727: single-stranded RNA binding2.05E-02
95GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.10E-02
96GO:0047134: protein-disulfide reductase activity2.17E-02
97GO:0004527: exonuclease activity2.42E-02
98GO:0030276: clathrin binding2.42E-02
99GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.43E-02
100GO:0004791: thioredoxin-disulfide reductase activity2.54E-02
101GO:0016853: isomerase activity2.54E-02
102GO:0004872: receptor activity2.67E-02
103GO:0008483: transaminase activity3.36E-02
104GO:0051213: dioxygenase activity3.65E-02
105GO:0005506: iron ion binding4.08E-02
106GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.14E-02
107GO:0004222: metalloendopeptidase activity4.72E-02
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Gene type



Gene DE type