Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G57950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046865: terpenoid transport0.00E+00
2GO:0010407: non-classical arabinogalactan protein metabolic process0.00E+00
3GO:0002084: protein depalmitoylation0.00E+00
4GO:0032324: molybdopterin cofactor biosynthetic process0.00E+00
5GO:0009560: embryo sac egg cell differentiation0.00E+00
6GO:0055122: response to very low light intensity stimulus0.00E+00
7GO:0097250: mitochondrial respiratory chain supercomplex assembly0.00E+00
8GO:0061158: 3'-UTR-mediated mRNA destabilization1.11E-05
9GO:0006517: protein deglycosylation1.11E-05
10GO:0006777: Mo-molybdopterin cofactor biosynthetic process1.05E-04
11GO:0071456: cellular response to hypoxia1.22E-04
12GO:0010230: alternative respiration2.57E-04
13GO:0042868: antisense RNA metabolic process2.57E-04
14GO:0002143: tRNA wobble position uridine thiolation2.57E-04
15GO:0098789: pre-mRNA cleavage required for polyadenylation2.57E-04
16GO:1902065: response to L-glutamate2.57E-04
17GO:0031123: RNA 3'-end processing2.57E-04
18GO:0071076: RNA 3' uridylation2.57E-04
19GO:0009700: indole phytoalexin biosynthetic process2.57E-04
20GO:0043066: negative regulation of apoptotic process5.68E-04
21GO:0008535: respiratory chain complex IV assembly5.68E-04
22GO:0051252: regulation of RNA metabolic process5.68E-04
23GO:0009156: ribonucleoside monophosphate biosynthetic process5.68E-04
24GO:0015709: thiosulfate transport5.68E-04
25GO:0031204: posttranslational protein targeting to membrane, translocation5.68E-04
26GO:0071422: succinate transmembrane transport5.68E-04
27GO:1902066: regulation of cell wall pectin metabolic process5.68E-04
28GO:0042853: L-alanine catabolic process5.68E-04
29GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex5.68E-04
30GO:0007584: response to nutrient5.68E-04
31GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process7.47E-04
32GO:1901672: positive regulation of systemic acquired resistance9.22E-04
33GO:0080168: abscisic acid transport9.22E-04
34GO:0048586: regulation of long-day photoperiodism, flowering9.22E-04
35GO:0032922: circadian regulation of gene expression9.22E-04
36GO:0017006: protein-tetrapyrrole linkage9.22E-04
37GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process9.22E-04
38GO:0015692: lead ion transport9.22E-04
39GO:0060968: regulation of gene silencing9.22E-04
40GO:0031022: nuclear migration along microfilament9.22E-04
41GO:0051707: response to other organism1.22E-03
42GO:0002679: respiratory burst involved in defense response1.32E-03
43GO:0010731: protein glutathionylation1.32E-03
44GO:0043967: histone H4 acetylation1.32E-03
45GO:0006515: misfolded or incompletely synthesized protein catabolic process1.32E-03
46GO:0055089: fatty acid homeostasis1.32E-03
47GO:0060964: regulation of gene silencing by miRNA1.32E-03
48GO:0015729: oxaloacetate transport1.32E-03
49GO:0009584: detection of visible light1.32E-03
50GO:0010104: regulation of ethylene-activated signaling pathway1.32E-03
51GO:0006516: glycoprotein catabolic process1.32E-03
52GO:0009636: response to toxic substance1.41E-03
53GO:0010107: potassium ion import1.76E-03
54GO:0001709: cell fate determination1.76E-03
55GO:0010188: response to microbial phytotoxin1.76E-03
56GO:0009902: chloroplast relocation1.76E-03
57GO:0009165: nucleotide biosynthetic process1.76E-03
58GO:0010363: regulation of plant-type hypersensitive response1.76E-03
59GO:0022622: root system development1.76E-03
60GO:0071423: malate transmembrane transport2.25E-03
61GO:0006623: protein targeting to vacuole2.61E-03
62GO:0035435: phosphate ion transmembrane transport2.77E-03
63GO:0010193: response to ozone2.79E-03
64GO:0051607: defense response to virus3.80E-03
65GO:2000014: regulation of endosperm development3.93E-03
66GO:0008272: sulfate transport3.93E-03
67GO:0009627: systemic acquired resistance4.49E-03
68GO:0006491: N-glycan processing4.56E-03
69GO:1900150: regulation of defense response to fungus4.56E-03
70GO:0050821: protein stabilization4.56E-03
71GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.56E-03
72GO:0009819: drought recovery4.56E-03
73GO:0001558: regulation of cell growth5.22E-03
74GO:0010120: camalexin biosynthetic process5.22E-03
75GO:0006002: fructose 6-phosphate metabolic process5.22E-03
76GO:0009407: toxin catabolic process5.79E-03
77GO:0010112: regulation of systemic acquired resistance5.92E-03
78GO:0048589: developmental growth5.92E-03
79GO:0000724: double-strand break repair via homologous recombination6.36E-03
80GO:0006952: defense response6.60E-03
81GO:0008202: steroid metabolic process6.64E-03
82GO:0043067: regulation of programmed cell death6.64E-03
83GO:0090332: stomatal closure6.64E-03
84GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.64E-03
85GO:0045087: innate immune response6.65E-03
86GO:0009617: response to bacterium7.00E-03
87GO:0043069: negative regulation of programmed cell death7.40E-03
88GO:0009089: lysine biosynthetic process via diaminopimelate8.19E-03
89GO:0006816: calcium ion transport8.19E-03
90GO:0009682: induced systemic resistance8.19E-03
91GO:0000209: protein polyubiquitination8.93E-03
92GO:0016925: protein sumoylation9.00E-03
93GO:0008361: regulation of cell size9.00E-03
94GO:0006855: drug transmembrane transport1.00E-02
95GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.04E-02
96GO:0007034: vacuolar transport1.07E-02
97GO:0010053: root epidermal cell differentiation1.16E-02
98GO:0042343: indole glucosinolate metabolic process1.16E-02
99GO:0007030: Golgi organization1.16E-02
100GO:0009809: lignin biosynthetic process1.16E-02
101GO:0006486: protein glycosylation1.16E-02
102GO:0006636: unsaturated fatty acid biosynthetic process1.25E-02
103GO:0034976: response to endoplasmic reticulum stress1.25E-02
104GO:0006289: nucleotide-excision repair1.35E-02
105GO:0006487: protein N-linked glycosylation1.35E-02
106GO:0009116: nucleoside metabolic process1.35E-02
107GO:0006338: chromatin remodeling1.35E-02
108GO:0009626: plant-type hypersensitive response1.46E-02
109GO:0031408: oxylipin biosynthetic process1.55E-02
110GO:0098542: defense response to other organism1.55E-02
111GO:0006334: nucleosome assembly1.55E-02
112GO:0048278: vesicle docking1.55E-02
113GO:0009814: defense response, incompatible interaction1.65E-02
114GO:2000022: regulation of jasmonic acid mediated signaling pathway1.65E-02
115GO:0010017: red or far-red light signaling pathway1.65E-02
116GO:0009625: response to insect1.76E-02
117GO:0006012: galactose metabolic process1.76E-02
118GO:0009306: protein secretion1.86E-02
119GO:0010584: pollen exine formation1.86E-02
120GO:0016310: phosphorylation1.91E-02
121GO:0009751: response to salicylic acid2.06E-02
122GO:0034220: ion transmembrane transport2.09E-02
123GO:0010118: stomatal movement2.09E-02
124GO:0009960: endosperm development2.20E-02
125GO:0048544: recognition of pollen2.32E-02
126GO:0061025: membrane fusion2.32E-02
127GO:0042752: regulation of circadian rhythm2.32E-02
128GO:0000302: response to reactive oxygen species2.56E-02
129GO:0048510: regulation of timing of transition from vegetative to reproductive phase2.56E-02
130GO:0002229: defense response to oomycetes2.56E-02
131GO:0031047: gene silencing by RNA2.68E-02
132GO:1901657: glycosyl compound metabolic process2.80E-02
133GO:0006904: vesicle docking involved in exocytosis3.06E-02
134GO:0007267: cell-cell signaling3.06E-02
135GO:0001666: response to hypoxia3.32E-02
136GO:0006468: protein phosphorylation3.38E-02
137GO:0042742: defense response to bacterium3.45E-02
138GO:0009816: defense response to bacterium, incompatible interaction3.46E-02
139GO:0006906: vesicle fusion3.59E-02
140GO:0048573: photoperiodism, flowering3.73E-02
141GO:0018298: protein-chromophore linkage4.01E-02
142GO:0008219: cell death4.01E-02
143GO:0009817: defense response to fungus, incompatible interaction4.01E-02
144GO:0006499: N-terminal protein myristoylation4.30E-02
145GO:0010043: response to zinc ion4.45E-02
146GO:0009631: cold acclimation4.45E-02
147GO:0006970: response to osmotic stress4.75E-02
RankGO TermAdjusted P value
1GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
2GO:0050513: glycoprotein 2-beta-D-xylosyltransferase activity0.00E+00
3GO:0061599: molybdopterin molybdotransferase activity0.00E+00
4GO:0030621: U4 snRNA binding0.00E+00
5GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
6GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
7GO:0061598: molybdopterin adenylyltransferase activity0.00E+00
8GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
9GO:0016621: cinnamoyl-CoA reductase activity1.90E-04
10GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity2.57E-04
11GO:0010285: L,L-diaminopimelate aminotransferase activity2.57E-04
12GO:0050265: RNA uridylyltransferase activity2.57E-04
13GO:1990188: euchromatin binding2.57E-04
14GO:0016301: kinase activity4.78E-04
15GO:0015117: thiosulfate transmembrane transporter activity5.68E-04
16GO:0048531: beta-1,3-galactosyltransferase activity5.68E-04
17GO:0008428: ribonuclease inhibitor activity5.68E-04
18GO:0004338: glucan exo-1,3-beta-glucosidase activity5.68E-04
19GO:1901677: phosphate transmembrane transporter activity5.68E-04
20GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity5.68E-04
21GO:0009883: red or far-red light photoreceptor activity5.68E-04
22GO:0051879: Hsp90 protein binding5.68E-04
23GO:0008378: galactosyltransferase activity6.59E-04
24GO:0031624: ubiquitin conjugating enzyme binding8.40E-04
25GO:0008020: G-protein coupled photoreceptor activity9.22E-04
26GO:0008265: Mo-molybdopterin cofactor sulfurase activity9.22E-04
27GO:0005310: dicarboxylic acid transmembrane transporter activity9.22E-04
28GO:0015141: succinate transmembrane transporter activity9.22E-04
29GO:0015131: oxaloacetate transmembrane transporter activity1.32E-03
30GO:0004792: thiosulfate sulfurtransferase activity1.32E-03
31GO:0017077: oxidative phosphorylation uncoupler activity1.32E-03
32GO:0004749: ribose phosphate diphosphokinase activity1.32E-03
33GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.32E-03
34GO:0009916: alternative oxidase activity1.76E-03
35GO:0015368: calcium:cation antiporter activity1.76E-03
36GO:0015369: calcium:proton antiporter activity1.76E-03
37GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.25E-03
38GO:0042285: xylosyltransferase activity2.25E-03
39GO:0031386: protein tag2.25E-03
40GO:0030151: molybdenum ion binding2.25E-03
41GO:0017070: U6 snRNA binding2.25E-03
42GO:0008641: small protein activating enzyme activity2.25E-03
43GO:0008948: oxaloacetate decarboxylase activity2.25E-03
44GO:0035252: UDP-xylosyltransferase activity2.77E-03
45GO:0008474: palmitoyl-(protein) hydrolase activity2.77E-03
46GO:0003730: mRNA 3'-UTR binding3.33E-03
47GO:0004656: procollagen-proline 4-dioxygenase activity3.33E-03
48GO:0016758: transferase activity, transferring hexosyl groups3.58E-03
49GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.59E-03
50GO:0004620: phospholipase activity3.93E-03
51GO:0102425: myricetin 3-O-glucosyltransferase activity3.93E-03
52GO:0102360: daphnetin 3-O-glucosyltransferase activity3.93E-03
53GO:0009881: photoreceptor activity3.93E-03
54GO:0003872: 6-phosphofructokinase activity3.93E-03
55GO:0015140: malate transmembrane transporter activity3.93E-03
56GO:0047893: flavonol 3-O-glucosyltransferase activity4.56E-03
57GO:0004525: ribonuclease III activity4.56E-03
58GO:0015491: cation:cation antiporter activity4.56E-03
59GO:0008312: 7S RNA binding4.56E-03
60GO:0004034: aldose 1-epimerase activity4.56E-03
61GO:0030247: polysaccharide binding4.74E-03
62GO:0008142: oxysterol binding5.22E-03
63GO:0005267: potassium channel activity5.22E-03
64GO:0030246: carbohydrate binding5.42E-03
65GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors6.65E-03
66GO:0004568: chitinase activity7.40E-03
67GO:0005543: phospholipid binding8.19E-03
68GO:0008559: xenobiotic-transporting ATPase activity8.19E-03
69GO:0047372: acylglycerol lipase activity8.19E-03
70GO:0004364: glutathione transferase activity8.25E-03
71GO:0015116: sulfate transmembrane transporter activity9.00E-03
72GO:0005524: ATP binding9.11E-03
73GO:0000155: phosphorelay sensor kinase activity9.85E-03
74GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.07E-02
75GO:0043531: ADP binding1.10E-02
76GO:0003712: transcription cofactor activity1.16E-02
77GO:0004674: protein serine/threonine kinase activity1.23E-02
78GO:0031418: L-ascorbic acid binding1.35E-02
79GO:0045735: nutrient reservoir activity1.37E-02
80GO:0035251: UDP-glucosyltransferase activity1.55E-02
81GO:0004707: MAP kinase activity1.55E-02
82GO:0016779: nucleotidyltransferase activity1.65E-02
83GO:0008810: cellulase activity1.76E-02
84GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.78E-02
85GO:0003756: protein disulfide isomerase activity1.86E-02
86GO:0003727: single-stranded RNA binding1.86E-02
87GO:0030170: pyridoxal phosphate binding2.30E-02
88GO:0016853: isomerase activity2.32E-02
89GO:0015297: antiporter activity2.74E-02
90GO:0008483: transaminase activity3.06E-02
91GO:0051213: dioxygenase activity3.32E-02
92GO:0015250: water channel activity3.32E-02
93GO:0008375: acetylglucosaminyltransferase activity3.59E-02
94GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.64E-02
95GO:0016798: hydrolase activity, acting on glycosyl bonds3.73E-02
96GO:0102483: scopolin beta-glucosidase activity3.73E-02
97GO:0015238: drug transmembrane transporter activity4.16E-02
98GO:0030145: manganese ion binding4.45E-02
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Gene type



Gene DE type