Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G57550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010401: pectic galactan metabolic process0.00E+00
2GO:0006497: protein lipidation0.00E+00
3GO:0072722: response to amitrole0.00E+00
4GO:0010055: atrichoblast differentiation0.00E+00
5GO:0006858: extracellular transport0.00E+00
6GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
7GO:0015031: protein transport2.41E-04
8GO:0032491: detection of molecule of fungal origin2.97E-04
9GO:0060862: negative regulation of floral organ abscission2.97E-04
10GO:0019605: butyrate metabolic process2.97E-04
11GO:0042964: thioredoxin reduction2.97E-04
12GO:0009968: negative regulation of signal transduction2.97E-04
13GO:0006083: acetate metabolic process2.97E-04
14GO:1990542: mitochondrial transmembrane transport2.97E-04
15GO:0032107: regulation of response to nutrient levels2.97E-04
16GO:0016337: single organismal cell-cell adhesion2.97E-04
17GO:0009623: response to parasitic fungus2.97E-04
18GO:0043547: positive regulation of GTPase activity2.97E-04
19GO:0035352: NAD transmembrane transport2.97E-04
20GO:0099132: ATP hydrolysis coupled cation transmembrane transport2.97E-04
21GO:0006102: isocitrate metabolic process2.98E-04
22GO:0009567: double fertilization forming a zygote and endosperm4.90E-04
23GO:0008202: steroid metabolic process5.22E-04
24GO:0002240: response to molecule of oomycetes origin6.50E-04
25GO:0010541: acropetal auxin transport6.50E-04
26GO:0019725: cellular homeostasis6.50E-04
27GO:0031349: positive regulation of defense response6.50E-04
28GO:1901703: protein localization involved in auxin polar transport6.50E-04
29GO:0015012: heparan sulfate proteoglycan biosynthetic process6.50E-04
30GO:0043132: NAD transport6.50E-04
31GO:0042814: monopolar cell growth6.50E-04
32GO:0046939: nucleotide phosphorylation6.50E-04
33GO:0080151: positive regulation of salicylic acid mediated signaling pathway6.50E-04
34GO:0006024: glycosaminoglycan biosynthetic process6.50E-04
35GO:0052541: plant-type cell wall cellulose metabolic process6.50E-04
36GO:0009727: detection of ethylene stimulus6.50E-04
37GO:0016192: vesicle-mediated transport9.33E-04
38GO:0002237: response to molecule of bacterial origin1.02E-03
39GO:0010288: response to lead ion1.05E-03
40GO:0010253: UDP-rhamnose biosynthetic process1.05E-03
41GO:0051176: positive regulation of sulfur metabolic process1.05E-03
42GO:0090630: activation of GTPase activity1.05E-03
43GO:0071398: cellular response to fatty acid1.05E-03
44GO:0010186: positive regulation of cellular defense response1.05E-03
45GO:0009410: response to xenobiotic stimulus1.05E-03
46GO:0010272: response to silver ion1.05E-03
47GO:0009225: nucleotide-sugar metabolic process1.14E-03
48GO:0070676: intralumenal vesicle formation1.51E-03
49GO:0001676: long-chain fatty acid metabolic process1.51E-03
50GO:0070301: cellular response to hydrogen peroxide1.51E-03
51GO:0072334: UDP-galactose transmembrane transport1.51E-03
52GO:0016998: cell wall macromolecule catabolic process1.70E-03
53GO:0009814: defense response, incompatible interaction1.86E-03
54GO:0033356: UDP-L-arabinose metabolic process2.02E-03
55GO:0000919: cell plate assembly2.02E-03
56GO:0006878: cellular copper ion homeostasis2.02E-03
57GO:0071369: cellular response to ethylene stimulus2.02E-03
58GO:0080037: negative regulation of cytokinin-activated signaling pathway2.02E-03
59GO:0060548: negative regulation of cell death2.02E-03
60GO:0045227: capsule polysaccharide biosynthetic process2.02E-03
61GO:0033358: UDP-L-arabinose biosynthetic process2.02E-03
62GO:0042127: regulation of cell proliferation2.20E-03
63GO:2000762: regulation of phenylpropanoid metabolic process2.58E-03
64GO:0098719: sodium ion import across plasma membrane2.58E-03
65GO:0006564: L-serine biosynthetic process2.58E-03
66GO:0031365: N-terminal protein amino acid modification2.58E-03
67GO:0006097: glyoxylate cycle2.58E-03
68GO:0006665: sphingolipid metabolic process2.58E-03
69GO:0000304: response to singlet oxygen2.58E-03
70GO:0002238: response to molecule of fungal origin3.19E-03
71GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione3.19E-03
72GO:0010942: positive regulation of cell death3.19E-03
73GO:0060918: auxin transport3.19E-03
74GO:0042176: regulation of protein catabolic process3.19E-03
75GO:0010315: auxin efflux3.19E-03
76GO:0032502: developmental process3.65E-03
77GO:0006694: steroid biosynthetic process3.84E-03
78GO:0006914: autophagy4.15E-03
79GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.53E-03
80GO:0009610: response to symbiotic fungus4.53E-03
81GO:0046470: phosphatidylcholine metabolic process4.53E-03
82GO:0009615: response to virus4.94E-03
83GO:0045454: cell redox homeostasis5.05E-03
84GO:0009850: auxin metabolic process5.26E-03
85GO:0030162: regulation of proteolysis5.26E-03
86GO:0006950: response to stress5.82E-03
87GO:0010204: defense response signaling pathway, resistance gene-independent6.03E-03
88GO:0019430: removal of superoxide radicals6.03E-03
89GO:0016042: lipid catabolic process6.65E-03
90GO:0015780: nucleotide-sugar transport6.83E-03
91GO:0009835: fruit ripening6.83E-03
92GO:0007338: single fertilization6.83E-03
93GO:0009051: pentose-phosphate shunt, oxidative branch6.83E-03
94GO:0048527: lateral root development7.46E-03
95GO:0007165: signal transduction7.61E-03
96GO:0051453: regulation of intracellular pH7.67E-03
97GO:0090332: stomatal closure7.67E-03
98GO:0048268: clathrin coat assembly7.67E-03
99GO:0048354: mucilage biosynthetic process involved in seed coat development7.67E-03
100GO:0009853: photorespiration8.18E-03
101GO:0006032: chitin catabolic process8.55E-03
102GO:0051555: flavonol biosynthetic process8.55E-03
103GO:0006099: tricarboxylic acid cycle8.56E-03
104GO:0000272: polysaccharide catabolic process9.46E-03
105GO:0055114: oxidation-reduction process9.62E-03
106GO:0006887: exocytosis9.73E-03
107GO:0006897: endocytosis9.73E-03
108GO:0071365: cellular response to auxin stimulus1.04E-02
109GO:0010102: lateral root morphogenesis1.14E-02
110GO:0006006: glucose metabolic process1.14E-02
111GO:0055046: microgametogenesis1.14E-02
112GO:0007034: vacuolar transport1.24E-02
113GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.28E-02
114GO:0031347: regulation of defense response1.28E-02
115GO:0009846: pollen germination1.33E-02
116GO:0070588: calcium ion transmembrane transport1.34E-02
117GO:0007033: vacuole organization1.34E-02
118GO:0007031: peroxisome organization1.34E-02
119GO:0009809: lignin biosynthetic process1.43E-02
120GO:0034976: response to endoplasmic reticulum stress1.45E-02
121GO:0009863: salicylic acid mediated signaling pathway1.56E-02
122GO:0030150: protein import into mitochondrial matrix1.56E-02
123GO:0005992: trehalose biosynthetic process1.56E-02
124GO:0000027: ribosomal large subunit assembly1.56E-02
125GO:0009738: abscisic acid-activated signaling pathway1.57E-02
126GO:0010073: meristem maintenance1.68E-02
127GO:0009269: response to desiccation1.79E-02
128GO:0009620: response to fungus1.86E-02
129GO:0080092: regulation of pollen tube growth1.91E-02
130GO:0071456: cellular response to hypoxia1.91E-02
131GO:0016226: iron-sulfur cluster assembly1.91E-02
132GO:0009411: response to UV2.03E-02
133GO:0010227: floral organ abscission2.03E-02
134GO:0006012: galactose metabolic process2.03E-02
135GO:0009693: ethylene biosynthetic process2.03E-02
136GO:0018105: peptidyl-serine phosphorylation2.10E-02
137GO:0006886: intracellular protein transport2.17E-02
138GO:0042147: retrograde transport, endosome to Golgi2.29E-02
139GO:0006869: lipid transport2.35E-02
140GO:0010087: phloem or xylem histogenesis2.42E-02
141GO:0006468: protein phosphorylation2.49E-02
142GO:0010182: sugar mediated signaling pathway2.55E-02
143GO:0048868: pollen tube development2.55E-02
144GO:0006885: regulation of pH2.55E-02
145GO:0045489: pectin biosynthetic process2.55E-02
146GO:0006814: sodium ion transport2.68E-02
147GO:0006629: lipid metabolic process2.72E-02
148GO:0009749: response to glucose2.82E-02
149GO:0006623: protein targeting to vacuole2.82E-02
150GO:0010183: pollen tube guidance2.82E-02
151GO:0006891: intra-Golgi vesicle-mediated transport2.96E-02
152GO:0010193: response to ozone2.96E-02
153GO:0008152: metabolic process3.07E-02
154GO:0030163: protein catabolic process3.25E-02
155GO:0010150: leaf senescence3.52E-02
156GO:0071805: potassium ion transmembrane transport3.55E-02
157GO:0006904: vesicle docking involved in exocytosis3.55E-02
158GO:0001666: response to hypoxia3.85E-02
159GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.93E-02
160GO:0050832: defense response to fungus4.00E-02
161GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.00E-02
162GO:0007166: cell surface receptor signaling pathway4.02E-02
163GO:0006906: vesicle fusion4.16E-02
164GO:0009627: systemic acquired resistance4.16E-02
165GO:0016049: cell growth4.48E-02
166GO:0016311: dephosphorylation4.48E-02
167GO:0030244: cellulose biosynthetic process4.65E-02
168GO:0042742: defense response to bacterium4.65E-02
169GO:0008219: cell death4.65E-02
170GO:0009817: defense response to fungus, incompatible interaction4.65E-02
171GO:0009832: plant-type cell wall biogenesis4.81E-02
RankGO TermAdjusted P value
1GO:0018580: nitronate monooxygenase activity0.00E+00
2GO:0019779: Atg8 activating enzyme activity4.02E-06
3GO:1990585: hydroxyproline O-arabinosyltransferase activity4.02E-06
4GO:0004449: isocitrate dehydrogenase (NAD+) activity3.21E-05
5GO:0019786: Atg8-specific protease activity2.97E-04
6GO:0010179: IAA-Ala conjugate hydrolase activity2.97E-04
7GO:0003987: acetate-CoA ligase activity2.97E-04
8GO:0015927: trehalase activity2.97E-04
9GO:0047760: butyrate-CoA ligase activity2.97E-04
10GO:0008142: oxysterol binding3.66E-04
11GO:0008970: phosphatidylcholine 1-acylhydrolase activity3.66E-04
12GO:0050377: UDP-glucose 4,6-dehydratase activity6.50E-04
13GO:0050736: O-malonyltransferase activity6.50E-04
14GO:0032791: lead ion binding6.50E-04
15GO:0052739: phosphatidylserine 1-acylhydrolase activity6.50E-04
16GO:0008460: dTDP-glucose 4,6-dehydratase activity6.50E-04
17GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity6.50E-04
18GO:0004617: phosphoglycerate dehydrogenase activity6.50E-04
19GO:0010280: UDP-L-rhamnose synthase activity6.50E-04
20GO:0051724: NAD transporter activity6.50E-04
21GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity6.50E-04
22GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity6.50E-04
23GO:0000774: adenyl-nucleotide exchange factor activity6.50E-04
24GO:0032934: sterol binding6.50E-04
25GO:0005096: GTPase activator activity9.11E-04
26GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.05E-03
27GO:0042409: caffeoyl-CoA O-methyltransferase activity1.05E-03
28GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.05E-03
29GO:0004416: hydroxyacylglutathione hydrolase activity1.51E-03
30GO:0010178: IAA-amino acid conjugate hydrolase activity1.51E-03
31GO:0017077: oxidative phosphorylation uncoupler activity1.51E-03
32GO:0019201: nucleotide kinase activity1.51E-03
33GO:0035529: NADH pyrophosphatase activity1.51E-03
34GO:0035251: UDP-glucosyltransferase activity1.70E-03
35GO:0019776: Atg8 ligase activity2.02E-03
36GO:0004930: G-protein coupled receptor activity2.02E-03
37GO:0000062: fatty-acyl-CoA binding2.02E-03
38GO:0004301: epoxide hydrolase activity2.02E-03
39GO:0050373: UDP-arabinose 4-epimerase activity2.02E-03
40GO:0051287: NAD binding2.02E-03
41GO:0004345: glucose-6-phosphate dehydrogenase activity2.02E-03
42GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.02E-03
43GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity2.02E-03
44GO:0005496: steroid binding2.58E-03
45GO:0047631: ADP-ribose diphosphatase activity2.58E-03
46GO:0008374: O-acyltransferase activity2.58E-03
47GO:0005459: UDP-galactose transmembrane transporter activity2.58E-03
48GO:0004791: thioredoxin-disulfide reductase activity2.98E-03
49GO:0016853: isomerase activity2.98E-03
50GO:0016208: AMP binding3.19E-03
51GO:0047714: galactolipase activity3.19E-03
52GO:0000210: NAD+ diphosphatase activity3.19E-03
53GO:0080043: quercetin 3-O-glucosyltransferase activity3.22E-03
54GO:0080044: quercetin 7-O-glucosyltransferase activity3.22E-03
55GO:0022857: transmembrane transporter activity3.35E-03
56GO:0102391: decanoate--CoA ligase activity3.84E-03
57GO:0003978: UDP-glucose 4-epimerase activity3.84E-03
58GO:0051020: GTPase binding3.84E-03
59GO:0051920: peroxiredoxin activity3.84E-03
60GO:0004017: adenylate kinase activity3.84E-03
61GO:0015385: sodium:proton antiporter activity3.89E-03
62GO:0008320: protein transmembrane transporter activity4.53E-03
63GO:0004467: long-chain fatty acid-CoA ligase activity4.53E-03
64GO:0005338: nucleotide-sugar transmembrane transporter activity4.53E-03
65GO:0008235: metalloexopeptidase activity4.53E-03
66GO:0005544: calcium-dependent phospholipid binding5.26E-03
67GO:0004033: aldo-keto reductase (NADP) activity5.26E-03
68GO:0004714: transmembrane receptor protein tyrosine kinase activity5.26E-03
69GO:0016209: antioxidant activity5.26E-03
70GO:0052747: sinapyl alcohol dehydrogenase activity5.26E-03
71GO:0004806: triglyceride lipase activity5.82E-03
72GO:0004630: phospholipase D activity6.03E-03
73GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.03E-03
74GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity6.83E-03
75GO:0071949: FAD binding6.83E-03
76GO:0016787: hydrolase activity8.08E-03
77GO:0008194: UDP-glycosyltransferase activity8.38E-03
78GO:0004713: protein tyrosine kinase activity8.55E-03
79GO:0004805: trehalose-phosphatase activity8.55E-03
80GO:0030234: enzyme regulator activity8.55E-03
81GO:0004568: chitinase activity8.55E-03
82GO:0008171: O-methyltransferase activity8.55E-03
83GO:0005545: 1-phosphatidylinositol binding8.55E-03
84GO:0008047: enzyme activator activity8.55E-03
85GO:0015020: glucuronosyltransferase activity8.55E-03
86GO:0004177: aminopeptidase activity9.46E-03
87GO:0015386: potassium:proton antiporter activity9.46E-03
88GO:0045551: cinnamyl-alcohol dehydrogenase activity1.04E-02
89GO:0016301: kinase activity1.04E-02
90GO:0005388: calcium-transporting ATPase activity1.14E-02
91GO:0004175: endopeptidase activity1.24E-02
92GO:0004190: aspartic-type endopeptidase activity1.34E-02
93GO:0004867: serine-type endopeptidase inhibitor activity1.34E-02
94GO:0008061: chitin binding1.34E-02
95GO:0004725: protein tyrosine phosphatase activity1.45E-02
96GO:0001046: core promoter sequence-specific DNA binding1.56E-02
97GO:0031418: L-ascorbic acid binding1.56E-02
98GO:0051087: chaperone binding1.68E-02
99GO:0004298: threonine-type endopeptidase activity1.79E-02
100GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.91E-02
101GO:0004674: protein serine/threonine kinase activity1.98E-02
102GO:0016757: transferase activity, transferring glycosyl groups2.14E-02
103GO:0003756: protein disulfide isomerase activity2.16E-02
104GO:0047134: protein-disulfide reductase activity2.29E-02
105GO:0005451: monovalent cation:proton antiporter activity2.42E-02
106GO:0016758: transferase activity, transferring hexosyl groups2.48E-02
107GO:0030276: clathrin binding2.55E-02
108GO:0001085: RNA polymerase II transcription factor binding2.55E-02
109GO:0010181: FMN binding2.68E-02
110GO:0015299: solute:proton antiporter activity2.68E-02
111GO:0005507: copper ion binding2.79E-02
112GO:0005516: calmodulin binding3.03E-02
113GO:0008565: protein transporter activity3.05E-02
114GO:0046872: metal ion binding3.21E-02
115GO:0015297: antiporter activity3.36E-02
116GO:0016791: phosphatase activity3.39E-02
117GO:0008237: metallopeptidase activity3.55E-02
118GO:0016722: oxidoreductase activity, oxidizing metal ions3.55E-02
119GO:0016597: amino acid binding3.70E-02
120GO:0051213: dioxygenase activity3.85E-02
121GO:0005515: protein binding4.07E-02
122GO:0009931: calcium-dependent protein serine/threonine kinase activity4.16E-02
123GO:0030247: polysaccharide binding4.32E-02
124GO:0004683: calmodulin-dependent protein kinase activity4.32E-02
125GO:0004721: phosphoprotein phosphatase activity4.32E-02
126GO:0042802: identical protein binding4.46E-02
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Gene type



Gene DE type