co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G57380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019516: lactate oxidation	0.00E+00
2	GO:1903647: negative regulation of chlorophyll catabolic process	0.00E+00
3	GO:0006511: ubiquitin-dependent protein catabolic process	2.92E-06
4	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.36E-05
5	GO:0055114: oxidation-reduction process	6.66E-05
6	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.27E-04
7	GO:0009407: toxin catabolic process	2.08E-04
8	GO:0051258: protein polymerization	2.94E-04
9	GO:0019483: beta-alanine biosynthetic process	2.94E-04
10	GO:0015865: purine nucleotide transport	2.94E-04
11	GO:0018345: protein palmitoylation	2.94E-04
12	GO:0080183: response to photooxidative stress	2.94E-04
13	GO:2000072: regulation of defense response to fungus, incompatible interaction	2.94E-04
14	GO:0006212: uracil catabolic process	2.94E-04
15	GO:0010540: basipetal auxin transport	3.20E-04
16	GO:0006487: protein N-linked glycosylation	4.45E-04
17	GO:0018342: protein prenylation	4.86E-04
18	GO:0010498: proteasomal protein catabolic process	4.86E-04
19	GO:0055074: calcium ion homeostasis	4.86E-04
20	GO:0030433: ubiquitin-dependent ERAD pathway	5.89E-04
21	GO:0010255: glucose mediated signaling pathway	6.95E-04
22	GO:0001676: long-chain fatty acid metabolic process	6.95E-04
23	GO:0046902: regulation of mitochondrial membrane permeability	6.95E-04
24	GO:0009963: positive regulation of flavonoid biosynthetic process	6.95E-04
25	GO:0016117: carotenoid biosynthetic process	7.51E-04
26	GO:0045454: cell redox homeostasis	8.16E-04
27	GO:0046283: anthocyanin-containing compound metabolic process	1.16E-03
28	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.16E-03
29	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.16E-03
30	GO:0009823: cytokinin catabolic process	1.16E-03
31	GO:0030163: protein catabolic process	1.20E-03
32	GO:0045040: protein import into mitochondrial outer membrane	1.43E-03
33	GO:0042176: regulation of protein catabolic process	1.43E-03
34	GO:0006694: steroid biosynthetic process	1.71E-03
35	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.71E-03
36	GO:0022904: respiratory electron transport chain	2.01E-03
37	GO:0080027: response to herbivore	2.01E-03
38	GO:0048766: root hair initiation	2.32E-03
39	GO:0010204: defense response signaling pathway, resistance gene-independent	2.65E-03
40	GO:0043562: cellular response to nitrogen levels	2.65E-03
41	GO:0009932: cell tip growth	2.65E-03
42	GO:0007186: G-protein coupled receptor signaling pathway	2.65E-03
43	GO:0009657: plastid organization	2.65E-03
44	GO:0006631: fatty acid metabolic process	2.94E-03
45	GO:0046685: response to arsenic-containing substance	3.00E-03
46	GO:0048268: clathrin coat assembly	3.36E-03
47	GO:0009636: response to toxic substance	3.58E-03
48	GO:0043069: negative regulation of programmed cell death	3.73E-03
49	GO:0051555: flavonol biosynthetic process	3.73E-03
50	GO:0043085: positive regulation of catalytic activity	4.12E-03
51	GO:0048765: root hair cell differentiation	4.12E-03
52	GO:0046856: phosphatidylinositol dephosphorylation	4.12E-03
53	GO:0006807: nitrogen compound metabolic process	4.93E-03
54	GO:0010102: lateral root morphogenesis	4.93E-03
55	GO:0010223: secondary shoot formation	5.36E-03
56	GO:0009266: response to temperature stimulus	5.36E-03
57	GO:0009934: regulation of meristem structural organization	5.36E-03
58	GO:0048768: root hair cell tip growth	5.36E-03
59	GO:0010053: root epidermal cell differentiation	5.80E-03
60	GO:0000162: tryptophan biosynthetic process	6.25E-03
61	GO:0010187: negative regulation of seed germination	6.71E-03
62	GO:0080147: root hair cell development	6.71E-03
63	GO:0006874: cellular calcium ion homeostasis	7.19E-03
64	GO:0071456: cellular response to hypoxia	8.18E-03
65	GO:0009625: response to insect	8.69E-03
66	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.75E-03
67	GO:0010118: stomatal movement	1.03E-02
68	GO:0042631: cellular response to water deprivation	1.03E-02
69	GO:0006885: regulation of pH	1.09E-02
70	GO:0006662: glycerol ether metabolic process	1.09E-02
71	GO:0007166: cell surface receptor signaling pathway	1.20E-02
72	GO:0006623: protein targeting to vacuole	1.20E-02
73	GO:0010193: response to ozone	1.26E-02
74	GO:0019761: glucosinolate biosynthetic process	1.32E-02
75	GO:0006914: autophagy	1.44E-02
76	GO:0010252: auxin homeostasis	1.44E-02
77	GO:0009615: response to virus	1.63E-02
78	GO:0016126: sterol biosynthetic process	1.63E-02
79	GO:0055085: transmembrane transport	1.66E-02
80	GO:0009627: systemic acquired resistance	1.77E-02
81	GO:0010411: xyloglucan metabolic process	1.83E-02
82	GO:0009817: defense response to fungus, incompatible interaction	1.97E-02
83	GO:0048767: root hair elongation	2.04E-02
84	GO:0009813: flavonoid biosynthetic process	2.04E-02
85	GO:0048527: lateral root development	2.19E-02
86	GO:0009867: jasmonic acid mediated signaling pathway	2.33E-02
87	GO:0045087: innate immune response	2.33E-02
88	GO:0009853: photorespiration	2.33E-02
89	GO:0034599: cellular response to oxidative stress	2.41E-02
90	GO:0006839: mitochondrial transport	2.56E-02
91	GO:0006887: exocytosis	2.64E-02
92	GO:0006897: endocytosis	2.64E-02
93	GO:0009926: auxin polar transport	2.80E-02
94	GO:0051707: response to other organism	2.80E-02
95	GO:0042546: cell wall biogenesis	2.88E-02
96	GO:0009751: response to salicylic acid	2.95E-02
97	GO:0009644: response to high light intensity	2.96E-02
98	GO:0006855: drug transmembrane transport	3.12E-02
99	GO:0000165: MAPK cascade	3.20E-02
100	GO:0009753: response to jasmonic acid	3.21E-02
101	GO:0006812: cation transport	3.29E-02
102	GO:0009733: response to auxin	3.44E-02
103	GO:0009809: lignin biosynthetic process	3.46E-02
104	GO:0006813: potassium ion transport	3.46E-02
105	GO:0051603: proteolysis involved in cellular protein catabolic process	3.54E-02
106	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.96E-02
107	GO:0009626: plant-type hypersensitive response	4.07E-02
108	GO:0009734: auxin-activated signaling pathway	4.21E-02
109	GO:0009553: embryo sac development	4.35E-02
110	GO:0009624: response to nematode	4.44E-02
111	GO:0018105: peptidyl-serine phosphorylation	4.53E-02
112	GO:0006396: RNA processing	4.53E-02
113	GO:0009742: brassinosteroid mediated signaling pathway	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity	0.00E+00
2	GO:0051990: (R)-2-hydroxyglutarate dehydrogenase activity	0.00E+00
3	GO:0004157: dihydropyrimidinase activity	0.00E+00
4	GO:0004298: threonine-type endopeptidase activity	4.27E-07
5	GO:0036402: proteasome-activating ATPase activity	3.36E-05
6	GO:0004458: D-lactate dehydrogenase (cytochrome) activity	1.27E-04
7	GO:0047545: 2-hydroxyglutarate dehydrogenase activity	1.27E-04
8	GO:0018708: thiol S-methyltransferase activity	2.94E-04
9	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	2.94E-04
10	GO:0008517: folic acid transporter activity	2.94E-04
11	GO:0004364: glutathione transferase activity	3.34E-04
12	GO:0017025: TBP-class protein binding	3.60E-04
13	GO:0005504: fatty acid binding	4.86E-04
14	GO:0052692: raffinose alpha-galactosidase activity	4.86E-04
15	GO:0004324: ferredoxin-NADP+ reductase activity	4.86E-04
16	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	4.86E-04
17	GO:0004557: alpha-galactosidase activity	4.86E-04
18	GO:0008233: peptidase activity	6.06E-04
19	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	6.95E-04
20	GO:0015035: protein disulfide oxidoreductase activity	8.35E-04
21	GO:0045430: chalcone isomerase activity	9.21E-04
22	GO:0004576: oligosaccharyl transferase activity	9.21E-04
23	GO:0010279: indole-3-acetic acid amido synthetase activity	9.21E-04
24	GO:0009916: alternative oxidase activity	9.21E-04
25	GO:0004834: tryptophan synthase activity	9.21E-04
26	GO:0005471: ATP:ADP antiporter activity	1.16E-03
27	GO:0019139: cytokinin dehydrogenase activity	1.16E-03
28	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.16E-03
29	GO:0051920: peroxiredoxin activity	1.71E-03
30	GO:0102391: decanoate--CoA ligase activity	1.71E-03
31	GO:0043295: glutathione binding	2.01E-03
32	GO:0004467: long-chain fatty acid-CoA ligase activity	2.01E-03
33	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.32E-03
34	GO:0016209: antioxidant activity	2.32E-03
35	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	3.00E-03
36	GO:0071949: FAD binding	3.00E-03
37	GO:0005198: structural molecule activity	3.58E-03
38	GO:0030234: enzyme regulator activity	3.73E-03
39	GO:0005545: 1-phosphatidylinositol binding	3.73E-03
40	GO:0008047: enzyme activator activity	3.73E-03
41	GO:0008327: methyl-CpG binding	4.12E-03
42	GO:0008559: xenobiotic-transporting ATPase activity	4.12E-03
43	GO:0008794: arsenate reductase (glutaredoxin) activity	4.12E-03
44	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.52E-03
45	GO:0004022: alcohol dehydrogenase (NAD) activity	4.93E-03
46	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.93E-03
47	GO:0008131: primary amine oxidase activity	5.36E-03
48	GO:0005217: intracellular ligand-gated ion channel activity	5.80E-03
49	GO:0008061: chitin binding	5.80E-03
50	GO:0004970: ionotropic glutamate receptor activity	5.80E-03
51	GO:0009055: electron carrier activity	6.46E-03
52	GO:0043130: ubiquitin binding	6.71E-03
53	GO:0035251: UDP-glucosyltransferase activity	7.68E-03
54	GO:0004540: ribonuclease activity	7.68E-03
55	GO:0004499: N,N-dimethylaniline monooxygenase activity	9.21E-03
56	GO:0047134: protein-disulfide reductase activity	9.75E-03
57	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.81E-03
58	GO:0005451: monovalent cation:proton antiporter activity	1.03E-02
59	GO:0030276: clathrin binding	1.09E-02
60	GO:0004791: thioredoxin-disulfide reductase activity	1.14E-02
61	GO:0015299: solute:proton antiporter activity	1.14E-02
62	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.26E-02
63	GO:0048038: quinone binding	1.26E-02
64	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.26E-02
65	GO:0015385: sodium:proton antiporter activity	1.38E-02
66	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.38E-02
67	GO:0004601: peroxidase activity	1.63E-02
68	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.77E-02
69	GO:0004683: calmodulin-dependent protein kinase activity	1.83E-02
70	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.83E-02
71	GO:0050660: flavin adenine dinucleotide binding	1.89E-02
72	GO:0019825: oxygen binding	1.92E-02
73	GO:0004497: monooxygenase activity	2.03E-02
74	GO:0005096: GTPase activator activity	2.04E-02
75	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.19E-02
76	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.43E-02
77	GO:0051539: 4 iron, 4 sulfur cluster binding	2.56E-02
78	GO:0050661: NADP binding	2.56E-02
79	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.70E-02
80	GO:0051537: 2 iron, 2 sulfur cluster binding	2.96E-02
81	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.16E-02
82	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.16E-02
83	GO:0016874: ligase activity	4.26E-02
84	GO:0003779: actin binding	4.35E-02
85	GO:0051082: unfolded protein binding	4.44E-02
86	GO:0016887: ATPase activity	4.62E-02