co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G57240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0006490: oligosaccharide-lipid intermediate biosynthetic process	0.00E+00
3	GO:0009407: toxin catabolic process	1.13E-04
4	GO:0006874: cellular calcium ion homeostasis	1.27E-04
5	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.99E-04
6	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.99E-04
7	GO:0046244: salicylic acid catabolic process	2.99E-04
8	GO:0010204: defense response signaling pathway, resistance gene-independent	3.71E-04
9	GO:0007186: G-protein coupled receptor signaling pathway	3.71E-04
10	GO:0010120: camalexin biosynthetic process	3.71E-04
11	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.16E-04
12	GO:0018345: protein palmitoylation	6.55E-04
13	GO:0008535: respiratory chain complex IV assembly	6.55E-04
14	GO:0080183: response to photooxidative stress	6.55E-04
15	GO:2000072: regulation of defense response to fungus, incompatible interaction	6.55E-04
16	GO:0009805: coumarin biosynthetic process	6.55E-04
17	GO:0006672: ceramide metabolic process	6.55E-04
18	GO:0006212: uracil catabolic process	6.55E-04
19	GO:0019483: beta-alanine biosynthetic process	6.55E-04
20	GO:0050832: defense response to fungus	8.61E-04
21	GO:0007165: signal transduction	9.50E-04
22	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.06E-03
23	GO:0045836: positive regulation of meiotic nuclear division	1.06E-03
24	GO:0018342: protein prenylation	1.06E-03
25	GO:0055074: calcium ion homeostasis	1.06E-03
26	GO:0006487: protein N-linked glycosylation	1.42E-03
27	GO:0001676: long-chain fatty acid metabolic process	1.52E-03
28	GO:0002239: response to oomycetes	1.52E-03
29	GO:0006809: nitric oxide biosynthetic process	1.52E-03
30	GO:0030433: ubiquitin-dependent ERAD pathway	1.88E-03
31	GO:0071456: cellular response to hypoxia	1.88E-03
32	GO:0019748: secondary metabolic process	1.88E-03
33	GO:0009617: response to bacterium	1.89E-03
34	GO:0006952: defense response	1.93E-03
35	GO:0045227: capsule polysaccharide biosynthetic process	2.04E-03
36	GO:0010483: pollen tube reception	2.04E-03
37	GO:0006536: glutamate metabolic process	2.04E-03
38	GO:0033358: UDP-L-arabinose biosynthetic process	2.04E-03
39	GO:0000919: cell plate assembly	2.04E-03
40	GO:0018279: protein N-linked glycosylation via asparagine	2.61E-03
41	GO:0046283: anthocyanin-containing compound metabolic process	2.61E-03
42	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.61E-03
43	GO:0045927: positive regulation of growth	2.61E-03
44	GO:0009823: cytokinin catabolic process	2.61E-03
45	GO:0006544: glycine metabolic process	2.61E-03
46	GO:0009626: plant-type hypersensitive response	3.15E-03
47	GO:0048579: negative regulation of long-day photoperiodism, flowering	3.22E-03
48	GO:0009635: response to herbicide	3.22E-03
49	GO:0006561: proline biosynthetic process	3.22E-03
50	GO:0006563: L-serine metabolic process	3.22E-03
51	GO:0006555: methionine metabolic process	3.22E-03
52	GO:0006623: protein targeting to vacuole	3.24E-03
53	GO:0009620: response to fungus	3.27E-03
54	GO:0048280: vesicle fusion with Golgi apparatus	3.87E-03
55	GO:0019509: L-methionine salvage from methylthioadenosine	3.87E-03
56	GO:0009612: response to mechanical stimulus	3.87E-03
57	GO:0048528: post-embryonic root development	4.57E-03
58	GO:1900056: negative regulation of leaf senescence	4.57E-03
59	GO:0050829: defense response to Gram-negative bacterium	4.57E-03
60	GO:0015937: coenzyme A biosynthetic process	4.57E-03
61	GO:0042742: defense response to bacterium	5.15E-03
62	GO:0055114: oxidation-reduction process	5.19E-03
63	GO:0009819: drought recovery	5.30E-03
64	GO:0043562: cellular response to nitrogen levels	6.08E-03
65	GO:0009808: lignin metabolic process	6.08E-03
66	GO:0009699: phenylpropanoid biosynthetic process	6.08E-03
67	GO:0009657: plastid organization	6.08E-03
68	GO:0008219: cell death	6.53E-03
69	GO:0010150: leaf senescence	7.38E-03
70	GO:0043067: regulation of programmed cell death	7.74E-03
71	GO:0035999: tetrahydrofolate interconversion	7.74E-03
72	GO:0048268: clathrin coat assembly	7.74E-03
73	GO:0006511: ubiquitin-dependent protein catabolic process	8.08E-03
74	GO:0006896: Golgi to vacuole transport	8.62E-03
75	GO:0009682: induced systemic resistance	9.55E-03
76	GO:0006790: sulfur compound metabolic process	1.05E-02
77	GO:0042546: cell wall biogenesis	1.11E-02
78	GO:0009718: anthocyanin-containing compound biosynthetic process	1.15E-02
79	GO:0009636: response to toxic substance	1.20E-02
80	GO:0010540: basipetal auxin transport	1.25E-02
81	GO:0009266: response to temperature stimulus	1.25E-02
82	GO:0042538: hyperosmotic salinity response	1.35E-02
83	GO:0046854: phosphatidylinositol phosphorylation	1.36E-02
84	GO:0009225: nucleotide-sugar metabolic process	1.36E-02
85	GO:0006863: purine nucleobase transport	1.47E-02
86	GO:0051603: proteolysis involved in cellular protein catabolic process	1.50E-02
87	GO:0005992: trehalose biosynthetic process	1.58E-02
88	GO:0010187: negative regulation of seed germination	1.58E-02
89	GO:0009416: response to light stimulus	1.68E-02
90	GO:0051321: meiotic cell cycle	1.81E-02
91	GO:0031348: negative regulation of defense response	1.93E-02
92	GO:0071369: cellular response to ethylene stimulus	2.05E-02
93	GO:0009625: response to insect	2.05E-02
94	GO:0010227: floral organ abscission	2.05E-02
95	GO:0006012: galactose metabolic process	2.05E-02
96	GO:0006284: base-excision repair	2.18E-02
97	GO:0019722: calcium-mediated signaling	2.18E-02
98	GO:0009561: megagametogenesis	2.18E-02
99	GO:0016117: carotenoid biosynthetic process	2.31E-02
100	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.31E-02
101	GO:0042147: retrograde transport, endosome to Golgi	2.31E-02
102	GO:0008284: positive regulation of cell proliferation	2.31E-02
103	GO:0000413: protein peptidyl-prolyl isomerization	2.44E-02
104	GO:0042631: cellular response to water deprivation	2.44E-02
105	GO:0010197: polar nucleus fusion	2.57E-02
106	GO:0048868: pollen tube development	2.57E-02
107	GO:0071472: cellular response to salt stress	2.57E-02
108	GO:0006885: regulation of pH	2.57E-02
109	GO:0048544: recognition of pollen	2.71E-02
110	GO:0009751: response to salicylic acid	2.71E-02
111	GO:0009058: biosynthetic process	2.72E-02
112	GO:0006891: intra-Golgi vesicle-mediated transport	2.99E-02
113	GO:0002229: defense response to oomycetes	2.99E-02
114	GO:0010193: response to ozone	2.99E-02
115	GO:0009630: gravitropism	3.13E-02
116	GO:0019761: glucosinolate biosynthetic process	3.13E-02
117	GO:0030163: protein catabolic process	3.28E-02
118	GO:0046686: response to cadmium ion	3.40E-02
119	GO:0051607: defense response to virus	3.73E-02
120	GO:0016579: protein deubiquitination	3.73E-02
121	GO:0009615: response to virus	3.88E-02
122	GO:0009607: response to biotic stimulus	4.04E-02
123	GO:0007166: cell surface receptor signaling pathway	4.07E-02
124	GO:0009627: systemic acquired resistance	4.20E-02
125	GO:0042128: nitrate assimilation	4.20E-02
126	GO:0006888: ER to Golgi vesicle-mediated transport	4.36E-02
127	GO:0010411: xyloglucan metabolic process	4.36E-02
128	GO:0009817: defense response to fungus, incompatible interaction	4.69E-02
129	GO:0007275: multicellular organism development	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0052926: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
2	GO:0004157: dihydropyrimidinase activity	0.00E+00
3	GO:0001729: ceramide kinase activity	0.00E+00
4	GO:0016504: peptidase activator activity	0.00E+00
5	GO:0052918: dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
6	GO:0004377: GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity	0.00E+00
7	GO:0070577: lysine-acetylated histone binding	0.00E+00
8	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
9	GO:0000026: alpha-1,2-mannosyltransferase activity	0.00E+00
10	GO:0004970: ionotropic glutamate receptor activity	7.89E-05
11	GO:0005217: intracellular ligand-gated ion channel activity	7.89E-05
12	GO:0004364: glutathione transferase activity	2.10E-04
13	GO:0043295: glutathione binding	2.39E-04
14	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	2.99E-04
15	GO:0043546: molybdopterin cofactor binding	2.99E-04
16	GO:2001147: camalexin binding	2.99E-04
17	GO:0050464: nitrate reductase (NADPH) activity	2.99E-04
18	GO:0008940: nitrate reductase activity	2.99E-04
19	GO:0009703: nitrate reductase (NADH) activity	2.99E-04
20	GO:2001227: quercitrin binding	2.99E-04
21	GO:0015157: oligosaccharide transmembrane transporter activity	2.99E-04
22	GO:0000386: second spliceosomal transesterification activity	2.99E-04
23	GO:0016301: kinase activity	5.10E-04
24	GO:0030246: carbohydrate binding	6.48E-04
25	GO:0004566: beta-glucuronidase activity	6.55E-04
26	GO:0010297: heteropolysaccharide binding	6.55E-04
27	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	6.55E-04
28	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	1.06E-03
29	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.06E-03
30	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.52E-03
31	GO:0004351: glutamate decarboxylase activity	1.52E-03
32	GO:0004298: threonine-type endopeptidase activity	1.72E-03
33	GO:0004576: oligosaccharyl transferase activity	2.04E-03
34	GO:0009916: alternative oxidase activity	2.04E-03
35	GO:0050373: UDP-arabinose 4-epimerase activity	2.04E-03
36	GO:0004930: G-protein coupled receptor activity	2.04E-03
37	GO:0070628: proteasome binding	2.04E-03
38	GO:0046527: glucosyltransferase activity	2.04E-03
39	GO:0003727: single-stranded RNA binding	2.23E-03
40	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.23E-03
41	GO:0030151: molybdenum ion binding	2.61E-03
42	GO:0019139: cytokinin dehydrogenase activity	2.61E-03
43	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.61E-03
44	GO:0004372: glycine hydroxymethyltransferase activity	2.61E-03
45	GO:0047714: galactolipase activity	3.22E-03
46	GO:0004872: receptor activity	3.24E-03
47	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.87E-03
48	GO:0102391: decanoate--CoA ligase activity	3.87E-03
49	GO:0003978: UDP-glucose 4-epimerase activity	3.87E-03
50	GO:0004497: monooxygenase activity	3.91E-03
51	GO:0005509: calcium ion binding	4.40E-03
52	GO:0004467: long-chain fatty acid-CoA ligase activity	4.57E-03
53	GO:0051213: dioxygenase activity	5.00E-03
54	GO:0030247: polysaccharide binding	5.89E-03
55	GO:0003951: NAD+ kinase activity	6.08E-03
56	GO:0004630: phospholipase D activity	6.08E-03
57	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	6.08E-03
58	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	6.08E-03
59	GO:0001104: RNA polymerase II transcription cofactor activity	6.08E-03
60	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	6.89E-03
61	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	8.28E-03
62	GO:0005545: 1-phosphatidylinositol binding	8.62E-03
63	GO:0050661: NADP binding	9.45E-03
64	GO:0008327: methyl-CpG binding	9.55E-03
65	GO:0008559: xenobiotic-transporting ATPase activity	9.55E-03
66	GO:0005089: Rho guanyl-nucleotide exchange factor activity	9.55E-03
67	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.05E-02
68	GO:0004022: alcohol dehydrogenase (NAD) activity	1.15E-02
69	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.15E-02
70	GO:0008131: primary amine oxidase activity	1.25E-02
71	GO:0004601: peroxidase activity	1.29E-02
72	GO:0004867: serine-type endopeptidase inhibitor activity	1.36E-02
73	GO:0050660: flavin adenine dinucleotide binding	1.55E-02
74	GO:0008134: transcription factor binding	1.58E-02
75	GO:0008233: peptidase activity	1.66E-02
76	GO:0005345: purine nucleobase transmembrane transporter activity	1.69E-02
77	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.81E-02
78	GO:0003824: catalytic activity	1.89E-02
79	GO:0004386: helicase activity	2.25E-02
80	GO:0004722: protein serine/threonine phosphatase activity	2.38E-02
81	GO:0005451: monovalent cation:proton antiporter activity	2.44E-02
82	GO:0030276: clathrin binding	2.57E-02
83	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.65E-02
84	GO:0015299: solute:proton antiporter activity	2.71E-02
85	GO:0010181: FMN binding	2.71E-02
86	GO:0050662: coenzyme binding	2.71E-02
87	GO:0019825: oxygen binding	2.84E-02
88	GO:0030170: pyridoxal phosphate binding	2.87E-02
89	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.99E-02
90	GO:0004843: thiol-dependent ubiquitin-specific protease activity	2.99E-02
91	GO:0005516: calmodulin binding	3.08E-02
92	GO:0015385: sodium:proton antiporter activity	3.28E-02
93	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.32E-02
94	GO:0046910: pectinesterase inhibitor activity	3.32E-02
95	GO:0020037: heme binding	3.47E-02
96	GO:0005525: GTP binding	3.51E-02
97	GO:0004683: calmodulin-dependent protein kinase activity	4.36E-02
98	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.36E-02
99	GO:0004806: triglyceride lipase activity	4.36E-02
100	GO:0005096: GTPase activator activity	4.85E-02