GO Enrichment Analysis of Co-expressed Genes with
AT3G56940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0015979: photosynthesis | 5.40E-14 |
| 5 | GO:0090391: granum assembly | 3.00E-09 |
| 6 | GO:0032544: plastid translation | 7.98E-09 |
| 7 | GO:0009735: response to cytokinin | 3.55E-08 |
| 8 | GO:0010196: nonphotochemical quenching | 5.66E-07 |
| 9 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 7.73E-07 |
| 10 | GO:0006000: fructose metabolic process | 2.91E-06 |
| 11 | GO:0009773: photosynthetic electron transport in photosystem I | 4.39E-06 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 6.45E-06 |
| 13 | GO:0006094: gluconeogenesis | 7.09E-06 |
| 14 | GO:0019253: reductive pentose-phosphate cycle | 8.79E-06 |
| 15 | GO:0010207: photosystem II assembly | 8.79E-06 |
| 16 | GO:0010600: regulation of auxin biosynthetic process | 1.29E-05 |
| 17 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.30E-05 |
| 18 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.84E-05 |
| 19 | GO:0042631: cellular response to water deprivation | 4.28E-05 |
| 20 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 4.51E-05 |
| 21 | GO:0009854: oxidative photosynthetic carbon pathway | 4.51E-05 |
| 22 | GO:0009772: photosynthetic electron transport in photosystem II | 6.07E-05 |
| 23 | GO:0009642: response to light intensity | 7.88E-05 |
| 24 | GO:0010928: regulation of auxin mediated signaling pathway | 7.88E-05 |
| 25 | GO:0006002: fructose 6-phosphate metabolic process | 9.94E-05 |
| 26 | GO:0010206: photosystem II repair | 1.22E-04 |
| 27 | GO:0080093: regulation of photorespiration | 1.23E-04 |
| 28 | GO:0031998: regulation of fatty acid beta-oxidation | 1.23E-04 |
| 29 | GO:0010205: photoinhibition | 1.48E-04 |
| 30 | GO:0018298: protein-chromophore linkage | 1.70E-04 |
| 31 | GO:0010218: response to far red light | 1.96E-04 |
| 32 | GO:0043085: positive regulation of catalytic activity | 2.05E-04 |
| 33 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.05E-04 |
| 34 | GO:0009637: response to blue light | 2.37E-04 |
| 35 | GO:0005986: sucrose biosynthetic process | 2.71E-04 |
| 36 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.86E-04 |
| 37 | GO:0010114: response to red light | 3.33E-04 |
| 38 | GO:0006518: peptide metabolic process | 4.72E-04 |
| 39 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 6.76E-04 |
| 40 | GO:0071484: cellular response to light intensity | 6.76E-04 |
| 41 | GO:0043207: response to external biotic stimulus | 6.76E-04 |
| 42 | GO:0006662: glycerol ether metabolic process | 8.35E-04 |
| 43 | GO:0015986: ATP synthesis coupled proton transport | 8.94E-04 |
| 44 | GO:0015976: carbon utilization | 8.97E-04 |
| 45 | GO:0006109: regulation of carbohydrate metabolic process | 8.97E-04 |
| 46 | GO:0045727: positive regulation of translation | 8.97E-04 |
| 47 | GO:0006656: phosphatidylcholine biosynthetic process | 1.13E-03 |
| 48 | GO:0043097: pyrimidine nucleoside salvage | 1.13E-03 |
| 49 | GO:0006097: glyoxylate cycle | 1.13E-03 |
| 50 | GO:0009107: lipoate biosynthetic process | 1.13E-03 |
| 51 | GO:0055114: oxidation-reduction process | 1.14E-03 |
| 52 | GO:0006206: pyrimidine nucleobase metabolic process | 1.39E-03 |
| 53 | GO:0050665: hydrogen peroxide biosynthetic process | 1.39E-03 |
| 54 | GO:0010027: thylakoid membrane organization | 1.45E-03 |
| 55 | GO:0042742: defense response to bacterium | 1.77E-03 |
| 56 | GO:0016311: dephosphorylation | 1.79E-03 |
| 57 | GO:1900057: positive regulation of leaf senescence | 1.95E-03 |
| 58 | GO:0010161: red light signaling pathway | 1.95E-03 |
| 59 | GO:0009704: de-etiolation | 2.26E-03 |
| 60 | GO:0009853: photorespiration | 2.38E-03 |
| 61 | GO:0009416: response to light stimulus | 2.48E-03 |
| 62 | GO:0034599: cellular response to oxidative stress | 2.49E-03 |
| 63 | GO:0071482: cellular response to light stimulus | 2.58E-03 |
| 64 | GO:0022900: electron transport chain | 2.58E-03 |
| 65 | GO:0009658: chloroplast organization | 2.60E-03 |
| 66 | GO:0006783: heme biosynthetic process | 2.91E-03 |
| 67 | GO:0006754: ATP biosynthetic process | 2.91E-03 |
| 68 | GO:0009245: lipid A biosynthetic process | 2.91E-03 |
| 69 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.26E-03 |
| 70 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.26E-03 |
| 71 | GO:0080167: response to karrikin | 3.41E-03 |
| 72 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.62E-03 |
| 73 | GO:0019684: photosynthesis, light reaction | 4.00E-03 |
| 74 | GO:0000272: polysaccharide catabolic process | 4.00E-03 |
| 75 | GO:0009750: response to fructose | 4.00E-03 |
| 76 | GO:0009698: phenylpropanoid metabolic process | 4.00E-03 |
| 77 | GO:0009585: red, far-red light phototransduction | 4.11E-03 |
| 78 | GO:0005983: starch catabolic process | 4.39E-03 |
| 79 | GO:0006108: malate metabolic process | 4.79E-03 |
| 80 | GO:0006006: glucose metabolic process | 4.79E-03 |
| 81 | GO:0009767: photosynthetic electron transport chain | 4.79E-03 |
| 82 | GO:0043086: negative regulation of catalytic activity | 4.85E-03 |
| 83 | GO:0006096: glycolytic process | 4.85E-03 |
| 84 | GO:0009266: response to temperature stimulus | 5.20E-03 |
| 85 | GO:0005985: sucrose metabolic process | 5.63E-03 |
| 86 | GO:0000027: ribosomal large subunit assembly | 6.51E-03 |
| 87 | GO:0031408: oxylipin biosynthetic process | 7.45E-03 |
| 88 | GO:0019748: secondary metabolic process | 7.93E-03 |
| 89 | GO:0010017: red or far-red light signaling pathway | 7.93E-03 |
| 90 | GO:0009693: ethylene biosynthetic process | 8.43E-03 |
| 91 | GO:0006633: fatty acid biosynthetic process | 9.17E-03 |
| 92 | GO:0042335: cuticle development | 9.99E-03 |
| 93 | GO:0000413: protein peptidyl-prolyl isomerization | 9.99E-03 |
| 94 | GO:0006606: protein import into nucleus | 9.99E-03 |
| 95 | GO:0007623: circadian rhythm | 1.01E-02 |
| 96 | GO:0006412: translation | 1.08E-02 |
| 97 | GO:0006814: sodium ion transport | 1.11E-02 |
| 98 | GO:0009409: response to cold | 1.15E-02 |
| 99 | GO:0006810: transport | 1.30E-02 |
| 100 | GO:0009627: systemic acquired resistance | 1.71E-02 |
| 101 | GO:0009631: cold acclimation | 2.12E-02 |
| 102 | GO:0007568: aging | 2.12E-02 |
| 103 | GO:0006865: amino acid transport | 2.19E-02 |
| 104 | GO:0045454: cell redox homeostasis | 2.33E-02 |
| 105 | GO:0006099: tricarboxylic acid cycle | 2.34E-02 |
| 106 | GO:0006869: lipid transport | 2.55E-02 |
| 107 | GO:0032259: methylation | 2.75E-02 |
| 108 | GO:0006364: rRNA processing | 3.35E-02 |
| 109 | GO:0009909: regulation of flower development | 3.60E-02 |
| 110 | GO:0009624: response to nematode | 4.31E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 2 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 3 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 5 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 6 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 7 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 8 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 9 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 10 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 7.73E-07 |
| 11 | GO:0031409: pigment binding | 1.30E-05 |
| 12 | GO:0016491: oxidoreductase activity | 2.64E-05 |
| 13 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 9.94E-05 |
| 14 | GO:0045485: omega-6 fatty acid desaturase activity | 1.23E-04 |
| 15 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.23E-04 |
| 16 | GO:0016168: chlorophyll binding | 1.26E-04 |
| 17 | GO:0008047: enzyme activator activity | 1.75E-04 |
| 18 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 2.86E-04 |
| 19 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.86E-04 |
| 20 | GO:0016630: protochlorophyllide reductase activity | 2.86E-04 |
| 21 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 2.86E-04 |
| 22 | GO:0008883: glutamyl-tRNA reductase activity | 2.86E-04 |
| 23 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.86E-04 |
| 24 | GO:0010297: heteropolysaccharide binding | 2.86E-04 |
| 25 | GO:0016992: lipoate synthase activity | 4.72E-04 |
| 26 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.72E-04 |
| 27 | GO:0016851: magnesium chelatase activity | 6.76E-04 |
| 28 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 6.76E-04 |
| 29 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 6.76E-04 |
| 30 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 6.76E-04 |
| 31 | GO:0047134: protein-disulfide reductase activity | 7.21E-04 |
| 32 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 8.35E-04 |
| 33 | GO:0004791: thioredoxin-disulfide reductase activity | 8.94E-04 |
| 34 | GO:0052793: pectin acetylesterase activity | 8.97E-04 |
| 35 | GO:0008891: glycolate oxidase activity | 8.97E-04 |
| 36 | GO:0008453: alanine-glyoxylate transaminase activity | 8.97E-04 |
| 37 | GO:0019843: rRNA binding | 1.01E-03 |
| 38 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.15E-03 |
| 39 | GO:0031177: phosphopantetheine binding | 1.39E-03 |
| 40 | GO:0016615: malate dehydrogenase activity | 1.39E-03 |
| 41 | GO:0004332: fructose-bisphosphate aldolase activity | 1.39E-03 |
| 42 | GO:0003735: structural constituent of ribosome | 1.63E-03 |
| 43 | GO:0030060: L-malate dehydrogenase activity | 1.66E-03 |
| 44 | GO:0004849: uridine kinase activity | 1.66E-03 |
| 45 | GO:0000035: acyl binding | 1.66E-03 |
| 46 | GO:0004033: aldo-keto reductase (NADP) activity | 2.26E-03 |
| 47 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 2.26E-03 |
| 48 | GO:0003993: acid phosphatase activity | 2.49E-03 |
| 49 | GO:0050661: NADP binding | 2.71E-03 |
| 50 | GO:0004185: serine-type carboxypeptidase activity | 3.06E-03 |
| 51 | GO:0030234: enzyme regulator activity | 3.62E-03 |
| 52 | GO:0051287: NAD binding | 3.69E-03 |
| 53 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.79E-03 |
| 54 | GO:0004089: carbonate dehydratase activity | 4.79E-03 |
| 55 | GO:0008266: poly(U) RNA binding | 5.20E-03 |
| 56 | GO:0015035: protein disulfide oxidoreductase activity | 6.00E-03 |
| 57 | GO:0004857: enzyme inhibitor activity | 6.51E-03 |
| 58 | GO:0051087: chaperone binding | 6.98E-03 |
| 59 | GO:0043424: protein histidine kinase binding | 6.98E-03 |
| 60 | GO:0008514: organic anion transmembrane transporter activity | 8.93E-03 |
| 61 | GO:0010181: FMN binding | 1.11E-02 |
| 62 | GO:0050662: coenzyme binding | 1.11E-02 |
| 63 | GO:0048038: quinone binding | 1.22E-02 |
| 64 | GO:0005515: protein binding | 1.80E-02 |
| 65 | GO:0004222: metalloendopeptidase activity | 2.05E-02 |
| 66 | GO:0003746: translation elongation factor activity | 2.26E-02 |
| 67 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.87E-02 |
| 68 | GO:0015293: symporter activity | 2.95E-02 |
| 69 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.03E-02 |
| 70 | GO:0009055: electron carrier activity | 3.08E-02 |
| 71 | GO:0015171: amino acid transmembrane transporter activity | 3.60E-02 |
| 72 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.86E-02 |
| 73 | GO:0008289: lipid binding | 3.98E-02 |