co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G56500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010266: response to vitamin B1	5.18E-05
2	GO:0046256: 2,4,6-trinitrotoluene catabolic process	5.18E-05
3	GO:0051788: response to misfolded protein	1.27E-04
4	GO:0019748: secondary metabolic process	1.77E-04
5	GO:0030029: actin filament-based process	2.17E-04
6	GO:0010498: proteasomal protein catabolic process	2.17E-04
7	GO:0009647: skotomorphogenesis	3.17E-04
8	GO:0010255: glucose mediated signaling pathway	3.17E-04
9	GO:0030163: protein catabolic process	3.82E-04
10	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.07E-04
11	GO:0009823: cytokinin catabolic process	5.39E-04
12	GO:0034314: Arp2/3 complex-mediated actin nucleation	6.60E-04
13	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	6.60E-04
14	GO:0043248: proteasome assembly	6.60E-04
15	GO:0006511: ubiquitin-dependent protein catabolic process	6.79E-04
16	GO:0045926: negative regulation of growth	7.87E-04
17	GO:0006694: steroid biosynthetic process	7.87E-04
18	GO:0000054: ribosomal subunit export from nucleus	7.87E-04
19	GO:0048528: post-embryonic root development	9.18E-04
20	GO:0031540: regulation of anthocyanin biosynthetic process	1.06E-03
21	GO:0007155: cell adhesion	1.06E-03
22	GO:0006367: transcription initiation from RNA polymerase II promoter	1.20E-03
23	GO:0000902: cell morphogenesis	1.35E-03
24	GO:0006098: pentose-phosphate shunt	1.35E-03
25	GO:0006006: glucose metabolic process	2.19E-03
26	GO:0030036: actin cytoskeleton organization	2.19E-03
27	GO:0007015: actin filament organization	2.38E-03
28	GO:0010053: root epidermal cell differentiation	2.56E-03
29	GO:0009825: multidimensional cell growth	2.56E-03
30	GO:0042744: hydrogen peroxide catabolic process	2.64E-03
31	GO:2000377: regulation of reactive oxygen species metabolic process	2.96E-03
32	GO:0030433: ubiquitin-dependent ERAD pathway	3.59E-03
33	GO:0006606: protein import into nucleus	4.49E-03
34	GO:0007018: microtubule-based movement	4.96E-03
35	GO:0048825: cotyledon development	5.21E-03
36	GO:0010090: trichome morphogenesis	5.97E-03
37	GO:0006914: autophagy	6.23E-03
38	GO:0010252: auxin homeostasis	6.23E-03
39	GO:0009615: response to virus	7.04E-03
40	GO:0016126: sterol biosynthetic process	7.04E-03
41	GO:0009627: systemic acquired resistance	7.59E-03
42	GO:0006950: response to stress	7.88E-03
43	GO:0016311: dephosphorylation	8.17E-03
44	GO:0009407: toxin catabolic process	9.06E-03
45	GO:0051707: response to other organism	1.19E-02
46	GO:0009636: response to toxic substance	1.30E-02
47	GO:0009736: cytokinin-activated signaling pathway	1.47E-02
48	GO:0009553: embryo sac development	1.85E-02
49	GO:0006508: proteolysis	2.68E-02
50	GO:0006468: protein phosphorylation	2.70E-02
51	GO:0010150: leaf senescence	2.79E-02
52	GO:0006979: response to oxidative stress	3.26E-02
53	GO:0055114: oxidation-reduction process	3.28E-02
54	GO:0031640: killing of cells of other organism	3.36E-02
55	GO:0009733: response to auxin	3.63E-02
56	GO:0009723: response to ethylene	4.23E-02
57	GO:0048366: leaf development	4.28E-02
58	GO:0010200: response to chitin	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0061133: endopeptidase activator activity	0.00E+00
2	GO:0019707: protein-cysteine S-acyltransferase activity	5.18E-05
3	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	1.27E-04
4	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	2.17E-04
5	GO:0070628: proteasome binding	4.24E-04
6	GO:0010279: indole-3-acetic acid amido synthetase activity	4.24E-04
7	GO:0004345: glucose-6-phosphate dehydrogenase activity	4.24E-04
8	GO:0019139: cytokinin dehydrogenase activity	5.39E-04
9	GO:0047714: galactolipase activity	6.60E-04
10	GO:0036402: proteasome-activating ATPase activity	6.60E-04
11	GO:0004185: serine-type carboxypeptidase activity	9.96E-04
12	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.20E-03
13	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.60E-03
14	GO:0008131: primary amine oxidase activity	2.38E-03
15	GO:0017025: TBP-class protein binding	2.56E-03
16	GO:0004725: protein tyrosine phosphatase activity	2.76E-03
17	GO:0043130: ubiquitin binding	2.96E-03
18	GO:0004298: threonine-type endopeptidase activity	3.37E-03
19	GO:0004601: peroxidase activity	4.91E-03
20	GO:0010181: FMN binding	4.96E-03
21	GO:0008233: peptidase activity	5.98E-03
22	GO:0016791: phosphatase activity	6.23E-03
23	GO:0005200: structural constituent of cytoskeleton	6.49E-03
24	GO:0004806: triglyceride lipase activity	7.88E-03
25	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	9.36E-03
26	GO:0004672: protein kinase activity	1.06E-02
27	GO:0050661: NADP binding	1.09E-02
28	GO:0004364: glutathione transferase activity	1.16E-02
29	GO:0020037: heme binding	1.16E-02
30	GO:0005198: structural molecule activity	1.30E-02
31	GO:0016887: ATPase activity	1.39E-02
32	GO:0003777: microtubule motor activity	1.58E-02
33	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.77E-02
34	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.77E-02
35	GO:0003779: actin binding	1.85E-02
36	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.26E-02
37	GO:0008017: microtubule binding	2.88E-02
38	GO:0008194: UDP-glycosyltransferase activity	3.03E-02
39	GO:0050660: flavin adenine dinucleotide binding	4.23E-02
40	GO:0004497: monooxygenase activity	4.44E-02
41	GO:0052689: carboxylic ester hydrolase activity	4.77E-02
42	GO:0004674: protein serine/threonine kinase activity	4.80E-02