GO Enrichment Analysis of Co-expressed Genes with
AT3G56430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010059: positive regulation of atrichoblast fate specification | 0.00E+00 |
| 2 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 3 | GO:0009606: tropism | 0.00E+00 |
| 4 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 5 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 7 | GO:0000492: box C/D snoRNP assembly | 0.00E+00 |
| 8 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 9 | GO:0000491: small nucleolar ribonucleoprotein complex assembly | 0.00E+00 |
| 10 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 11 | GO:0006518: peptide metabolic process | 5.25E-06 |
| 12 | GO:1900865: chloroplast RNA modification | 5.50E-06 |
| 13 | GO:0009913: epidermal cell differentiation | 5.43E-05 |
| 14 | GO:0010305: leaf vascular tissue pattern formation | 9.50E-05 |
| 15 | GO:0010063: positive regulation of trichoblast fate specification | 1.71E-04 |
| 16 | GO:0048829: root cap development | 2.80E-04 |
| 17 | GO:0018026: peptidyl-lysine monomethylation | 3.87E-04 |
| 18 | GO:1900033: negative regulation of trichome patterning | 3.87E-04 |
| 19 | GO:2000123: positive regulation of stomatal complex development | 3.87E-04 |
| 20 | GO:0043039: tRNA aminoacylation | 3.87E-04 |
| 21 | GO:0010569: regulation of double-strand break repair via homologous recombination | 3.87E-04 |
| 22 | GO:0010588: cotyledon vascular tissue pattern formation | 4.24E-04 |
| 23 | GO:0003333: amino acid transmembrane transport | 7.97E-04 |
| 24 | GO:0016556: mRNA modification | 9.04E-04 |
| 25 | GO:0010071: root meristem specification | 9.04E-04 |
| 26 | GO:2000038: regulation of stomatal complex development | 1.20E-03 |
| 27 | GO:0006479: protein methylation | 1.20E-03 |
| 28 | GO:0048629: trichome patterning | 1.20E-03 |
| 29 | GO:1900864: mitochondrial RNA modification | 1.20E-03 |
| 30 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.20E-03 |
| 31 | GO:0048825: cotyledon development | 1.47E-03 |
| 32 | GO:0048497: maintenance of floral organ identity | 1.52E-03 |
| 33 | GO:0010375: stomatal complex patterning | 1.52E-03 |
| 34 | GO:1902456: regulation of stomatal opening | 1.87E-03 |
| 35 | GO:0042793: transcription from plastid promoter | 1.87E-03 |
| 36 | GO:0009643: photosynthetic acclimation | 1.87E-03 |
| 37 | GO:0009959: negative gravitropism | 1.87E-03 |
| 38 | GO:0016554: cytidine to uridine editing | 1.87E-03 |
| 39 | GO:0010315: auxin efflux | 1.87E-03 |
| 40 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.24E-03 |
| 41 | GO:0010103: stomatal complex morphogenesis | 2.64E-03 |
| 42 | GO:0048437: floral organ development | 2.64E-03 |
| 43 | GO:0048481: plant ovule development | 2.94E-03 |
| 44 | GO:0048766: root hair initiation | 3.06E-03 |
| 45 | GO:0046620: regulation of organ growth | 3.06E-03 |
| 46 | GO:0009734: auxin-activated signaling pathway | 3.49E-03 |
| 47 | GO:0019430: removal of superoxide radicals | 3.50E-03 |
| 48 | GO:0032544: plastid translation | 3.50E-03 |
| 49 | GO:0007389: pattern specification process | 3.50E-03 |
| 50 | GO:0009657: plastid organization | 3.50E-03 |
| 51 | GO:0006865: amino acid transport | 3.55E-03 |
| 52 | GO:0048589: developmental growth | 3.95E-03 |
| 53 | GO:0000902: cell morphogenesis | 3.95E-03 |
| 54 | GO:0009245: lipid A biosynthetic process | 3.95E-03 |
| 55 | GO:0031425: chloroplast RNA processing | 4.44E-03 |
| 56 | GO:0006535: cysteine biosynthetic process from serine | 4.93E-03 |
| 57 | GO:0045036: protein targeting to chloroplast | 4.93E-03 |
| 58 | GO:0006949: syncytium formation | 4.93E-03 |
| 59 | GO:0019538: protein metabolic process | 4.93E-03 |
| 60 | GO:0009416: response to light stimulus | 4.96E-03 |
| 61 | GO:0009750: response to fructose | 5.45E-03 |
| 62 | GO:0046856: phosphatidylinositol dephosphorylation | 5.45E-03 |
| 63 | GO:0010152: pollen maturation | 5.98E-03 |
| 64 | GO:0012501: programmed cell death | 5.98E-03 |
| 65 | GO:0045037: protein import into chloroplast stroma | 5.98E-03 |
| 66 | GO:0009691: cytokinin biosynthetic process | 6.54E-03 |
| 67 | GO:0080188: RNA-directed DNA methylation | 7.69E-03 |
| 68 | GO:0048367: shoot system development | 7.86E-03 |
| 69 | GO:0080147: root hair cell development | 8.92E-03 |
| 70 | GO:2000377: regulation of reactive oxygen species metabolic process | 8.92E-03 |
| 71 | GO:0019344: cysteine biosynthetic process | 8.92E-03 |
| 72 | GO:0019953: sexual reproduction | 9.56E-03 |
| 73 | GO:0006418: tRNA aminoacylation for protein translation | 9.56E-03 |
| 74 | GO:0010082: regulation of root meristem growth | 1.16E-02 |
| 75 | GO:0009411: response to UV | 1.16E-02 |
| 76 | GO:0042127: regulation of cell proliferation | 1.23E-02 |
| 77 | GO:0048443: stamen development | 1.23E-02 |
| 78 | GO:0009845: seed germination | 1.24E-02 |
| 79 | GO:0080022: primary root development | 1.37E-02 |
| 80 | GO:0008033: tRNA processing | 1.37E-02 |
| 81 | GO:0010087: phloem or xylem histogenesis | 1.37E-02 |
| 82 | GO:0010118: stomatal movement | 1.37E-02 |
| 83 | GO:0009958: positive gravitropism | 1.45E-02 |
| 84 | GO:0071472: cellular response to salt stress | 1.45E-02 |
| 85 | GO:0007018: microtubule-based movement | 1.52E-02 |
| 86 | GO:0040008: regulation of growth | 1.52E-02 |
| 87 | GO:0009749: response to glucose | 1.60E-02 |
| 88 | GO:0009451: RNA modification | 1.63E-02 |
| 89 | GO:0080156: mitochondrial mRNA modification | 1.68E-02 |
| 90 | GO:0009733: response to auxin | 1.72E-02 |
| 91 | GO:0019761: glucosinolate biosynthetic process | 1.76E-02 |
| 92 | GO:0009630: gravitropism | 1.76E-02 |
| 93 | GO:0030163: protein catabolic process | 1.84E-02 |
| 94 | GO:0009639: response to red or far red light | 1.93E-02 |
| 95 | GO:0009828: plant-type cell wall loosening | 1.93E-02 |
| 96 | GO:0010252: auxin homeostasis | 1.93E-02 |
| 97 | GO:0007267: cell-cell signaling | 2.01E-02 |
| 98 | GO:0010027: thylakoid membrane organization | 2.18E-02 |
| 99 | GO:0006508: proteolysis | 2.73E-02 |
| 100 | GO:0048767: root hair elongation | 2.73E-02 |
| 101 | GO:0045892: negative regulation of transcription, DNA-templated | 3.71E-02 |
| 102 | GO:0009926: auxin polar transport | 3.74E-02 |
| 103 | GO:0009744: response to sucrose | 3.74E-02 |
| 104 | GO:0032259: methylation | 4.30E-02 |
| 105 | GO:0016042: lipid catabolic process | 4.37E-02 |
| 106 | GO:0009664: plant-type cell wall organization | 4.40E-02 |
| 107 | GO:0006364: rRNA processing | 4.62E-02 |
| 108 | GO:0006397: mRNA processing | 4.68E-02 |
| 109 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.74E-02 |
| 110 | GO:0009793: embryo development ending in seed dormancy | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 2 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 3 | GO:0004784: superoxide dismutase activity | 5.43E-05 |
| 4 | GO:0003723: RNA binding | 1.47E-04 |
| 5 | GO:0052381: tRNA dimethylallyltransferase activity | 1.71E-04 |
| 6 | GO:0016274: protein-arginine N-methyltransferase activity | 1.71E-04 |
| 7 | GO:0004016: adenylate cyclase activity | 1.71E-04 |
| 8 | GO:0004831: tyrosine-tRNA ligase activity | 1.71E-04 |
| 9 | GO:0004222: metalloendopeptidase activity | 3.58E-04 |
| 10 | GO:0003725: double-stranded RNA binding | 4.24E-04 |
| 11 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.79E-04 |
| 12 | GO:0004519: endonuclease activity | 4.85E-04 |
| 13 | GO:0009041: uridylate kinase activity | 9.04E-04 |
| 14 | GO:0004930: G-protein coupled receptor activity | 1.20E-03 |
| 15 | GO:0016279: protein-lysine N-methyltransferase activity | 1.20E-03 |
| 16 | GO:0010011: auxin binding | 1.20E-03 |
| 17 | GO:0010328: auxin influx transmembrane transporter activity | 1.20E-03 |
| 18 | GO:0004888: transmembrane signaling receptor activity | 1.52E-03 |
| 19 | GO:0031177: phosphopantetheine binding | 1.87E-03 |
| 20 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.87E-03 |
| 21 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.08E-03 |
| 22 | GO:0000035: acyl binding | 2.24E-03 |
| 23 | GO:0004124: cysteine synthase activity | 2.24E-03 |
| 24 | GO:0030515: snoRNA binding | 2.64E-03 |
| 25 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 3.06E-03 |
| 26 | GO:0008173: RNA methyltransferase activity | 3.50E-03 |
| 27 | GO:0008168: methyltransferase activity | 4.40E-03 |
| 28 | GO:0009672: auxin:proton symporter activity | 4.44E-03 |
| 29 | GO:0015293: symporter activity | 5.37E-03 |
| 30 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 5.98E-03 |
| 31 | GO:0010329: auxin efflux transmembrane transporter activity | 6.54E-03 |
| 32 | GO:0015171: amino acid transmembrane transporter activity | 7.12E-03 |
| 33 | GO:0004190: aspartic-type endopeptidase activity | 7.69E-03 |
| 34 | GO:0043424: protein histidine kinase binding | 9.56E-03 |
| 35 | GO:0030570: pectate lyase activity | 1.16E-02 |
| 36 | GO:0004812: aminoacyl-tRNA ligase activity | 1.30E-02 |
| 37 | GO:0001085: RNA polymerase II transcription factor binding | 1.45E-02 |
| 38 | GO:0008289: lipid binding | 1.52E-02 |
| 39 | GO:0019901: protein kinase binding | 1.60E-02 |
| 40 | GO:0004518: nuclease activity | 1.76E-02 |
| 41 | GO:0005200: structural constituent of cytoskeleton | 2.01E-02 |
| 42 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 2.01E-02 |
| 43 | GO:0051213: dioxygenase activity | 2.18E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 2.51E-02 |
| 45 | GO:0003677: DNA binding | 2.59E-02 |
| 46 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.92E-02 |
| 47 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 2.93E-02 |
| 48 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.12E-02 |
| 49 | GO:0052689: carboxylic ester hydrolase activity | 3.37E-02 |
| 50 | GO:0004185: serine-type carboxypeptidase activity | 3.74E-02 |
| 51 | GO:0043621: protein self-association | 3.96E-02 |
| 52 | GO:0003777: microtubule motor activity | 4.97E-02 |