co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G55730

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
2	GO:0006216: cytidine catabolic process	0.00E+00
3	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
4	GO:0006497: protein lipidation	0.00E+00
5	GO:0051707: response to other organism	3.12E-05
6	GO:0042759: long-chain fatty acid biosynthetic process	1.40E-04
7	GO:0010150: leaf senescence	2.72E-04
8	GO:1902066: regulation of cell wall pectin metabolic process	3.20E-04
9	GO:0042853: L-alanine catabolic process	3.20E-04
10	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.20E-04
11	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	5.26E-04
12	GO:0010498: proteasomal protein catabolic process	5.26E-04
13	GO:1901672: positive regulation of systemic acquired resistance	5.26E-04
14	GO:1900055: regulation of leaf senescence	5.26E-04
15	GO:0048586: regulation of long-day photoperiodism, flowering	5.26E-04
16	GO:0032922: circadian regulation of gene expression	5.26E-04
17	GO:0061158: 3'-UTR-mediated mRNA destabilization	5.26E-04
18	GO:0010104: regulation of ethylene-activated signaling pathway	7.53E-04
19	GO:0010306: rhamnogalacturonan II biosynthetic process	7.53E-04
20	GO:1902290: positive regulation of defense response to oomycetes	7.53E-04
21	GO:0046513: ceramide biosynthetic process	7.53E-04
22	GO:0033356: UDP-L-arabinose metabolic process	9.98E-04
23	GO:0071368: cellular response to cytokinin stimulus	1.26E-03
24	GO:0098719: sodium ion import across plasma membrane	1.26E-03
25	GO:0009435: NAD biosynthetic process	1.26E-03
26	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.55E-03
27	GO:0002238: response to molecule of fungal origin	1.55E-03
28	GO:0009972: cytidine deamination	1.55E-03
29	GO:0010405: arabinogalactan protein metabolic process	1.55E-03
30	GO:0009816: defense response to bacterium, incompatible interaction	1.81E-03
31	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.86E-03
32	GO:0080113: regulation of seed growth	1.86E-03
33	GO:0006952: defense response	2.03E-03
34	GO:0071446: cellular response to salicylic acid stimulus	2.18E-03
35	GO:1900056: negative regulation of leaf senescence	2.18E-03
36	GO:0045995: regulation of embryonic development	2.18E-03
37	GO:0046470: phosphatidylcholine metabolic process	2.18E-03
38	GO:1900150: regulation of defense response to fungus	2.52E-03
39	GO:0009850: auxin metabolic process	2.52E-03
40	GO:0043068: positive regulation of programmed cell death	2.52E-03
41	GO:0006102: isocitrate metabolic process	2.52E-03
42	GO:0007568: aging	2.56E-03
43	GO:0006367: transcription initiation from RNA polymerase II promoter	2.88E-03
44	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.88E-03
45	GO:0019432: triglyceride biosynthetic process	3.26E-03
46	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.65E-03
47	GO:0008202: steroid metabolic process	3.65E-03
48	GO:0051453: regulation of intracellular pH	3.65E-03
49	GO:1900426: positive regulation of defense response to bacterium	3.65E-03
50	GO:0043069: negative regulation of programmed cell death	4.06E-03
51	GO:0009682: induced systemic resistance	4.48E-03
52	GO:0043085: positive regulation of catalytic activity	4.48E-03
53	GO:0006486: protein glycosylation	4.85E-03
54	GO:0010102: lateral root morphogenesis	5.37E-03
55	GO:0006508: proteolysis	5.37E-03
56	GO:0050826: response to freezing	5.37E-03
57	GO:0055046: microgametogenesis	5.37E-03
58	GO:0002237: response to molecule of bacterial origin	5.84E-03
59	GO:0009620: response to fungus	6.30E-03
60	GO:0010030: positive regulation of seed germination	6.32E-03
61	GO:0006071: glycerol metabolic process	6.81E-03
62	GO:2000377: regulation of reactive oxygen species metabolic process	7.32E-03
63	GO:0007017: microtubule-based process	7.84E-03
64	GO:0009814: defense response, incompatible interaction	8.92E-03
65	GO:2000022: regulation of jasmonic acid mediated signaling pathway	8.92E-03
66	GO:0042742: defense response to bacterium	9.37E-03
67	GO:0010082: regulation of root meristem growth	9.48E-03
68	GO:0009561: megagametogenesis	1.01E-02
69	GO:0042391: regulation of membrane potential	1.12E-02
70	GO:0008033: tRNA processing	1.12E-02
71	GO:0045489: pectin biosynthetic process	1.18E-02
72	GO:0006814: sodium ion transport	1.25E-02
73	GO:0006623: protein targeting to vacuole	1.31E-02
74	GO:0009749: response to glucose	1.31E-02
75	GO:0015031: protein transport	1.35E-02
76	GO:0010193: response to ozone	1.37E-02
77	GO:0009617: response to bacterium	1.43E-02
78	GO:0016032: viral process	1.44E-02
79	GO:0006914: autophagy	1.58E-02
80	GO:0050832: defense response to fungus	1.59E-02
81	GO:0071805: potassium ion transmembrane transport	1.64E-02
82	GO:0051607: defense response to virus	1.71E-02
83	GO:0001666: response to hypoxia	1.79E-02
84	GO:0009615: response to virus	1.79E-02
85	GO:0010029: regulation of seed germination	1.86E-02
86	GO:0006970: response to osmotic stress	2.00E-02
87	GO:0030244: cellulose biosynthetic process	2.16E-02
88	GO:0008219: cell death	2.16E-02
89	GO:0009832: plant-type cell wall biogenesis	2.23E-02
90	GO:0006499: N-terminal protein myristoylation	2.31E-02
91	GO:0009631: cold acclimation	2.39E-02
92	GO:0010119: regulation of stomatal movement	2.39E-02
93	GO:0010043: response to zinc ion	2.39E-02
94	GO:0045087: innate immune response	2.55E-02
95	GO:0016051: carbohydrate biosynthetic process	2.55E-02
96	GO:0006099: tricarboxylic acid cycle	2.63E-02
97	GO:0007165: signal transduction	2.81E-02
98	GO:0006631: fatty acid metabolic process	2.88E-02
99	GO:0042542: response to hydrogen peroxide	2.97E-02
100	GO:0000209: protein polyubiquitination	3.14E-02
101	GO:0009636: response to toxic substance	3.32E-02
102	GO:0009408: response to heat	3.39E-02
103	GO:0006855: drug transmembrane transport	3.41E-02
104	GO:0071555: cell wall organization	3.48E-02
105	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.50E-02
106	GO:0000165: MAPK cascade	3.50E-02
107	GO:0048364: root development	3.54E-02
108	GO:0008152: metabolic process	3.74E-02
109	GO:0009736: cytokinin-activated signaling pathway	3.78E-02
110	GO:0009626: plant-type hypersensitive response	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
2	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
3	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
4	GO:0008734: L-aspartate oxidase activity	0.00E+00
5	GO:0019211: phosphatase activator activity	0.00E+00
6	GO:0047844: deoxycytidine deaminase activity	0.00E+00
7	GO:0005212: structural constituent of eye lens	0.00E+00
8	GO:0034338: short-chain carboxylesterase activity	0.00E+00
9	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
10	GO:0035252: UDP-xylosyltransferase activity	3.90E-05
11	GO:0019707: protein-cysteine S-acyltransferase activity	1.40E-04
12	GO:0019779: Atg8 activating enzyme activity	3.20E-04
13	GO:0050291: sphingosine N-acyltransferase activity	3.20E-04
14	GO:0004809: tRNA (guanine-N2-)-methyltransferase activity	3.20E-04
15	GO:0000030: mannosyltransferase activity	5.26E-04
16	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	7.53E-04
17	GO:0004449: isocitrate dehydrogenase (NAD+) activity	7.53E-04
18	GO:0035529: NADH pyrophosphatase activity	7.53E-04
19	GO:0010178: IAA-amino acid conjugate hydrolase activity	7.53E-04
20	GO:0004623: phospholipase A2 activity	1.26E-03
21	GO:0047631: ADP-ribose diphosphatase activity	1.26E-03
22	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.55E-03
23	GO:0000210: NAD+ diphosphatase activity	1.55E-03
24	GO:0004126: cytidine deaminase activity	1.86E-03
25	GO:0005261: cation channel activity	1.86E-03
26	GO:0003730: mRNA 3'-UTR binding	1.86E-03
27	GO:0004144: diacylglycerol O-acyltransferase activity	1.86E-03
28	GO:0008375: acetylglucosaminyltransferase activity	1.91E-03
29	GO:0102425: myricetin 3-O-glucosyltransferase activity	2.18E-03
30	GO:0102360: daphnetin 3-O-glucosyltransferase activity	2.18E-03
31	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.52E-03
32	GO:0004708: MAP kinase kinase activity	2.52E-03
33	GO:0008142: oxysterol binding	2.88E-03
34	GO:0004630: phospholipase D activity	2.88E-03
35	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.88E-03
36	GO:0015386: potassium:proton antiporter activity	4.48E-03
37	GO:0008378: galactosyltransferase activity	4.92E-03
38	GO:0000049: tRNA binding	4.92E-03
39	GO:0004871: signal transducer activity	5.64E-03
40	GO:0030553: cGMP binding	6.32E-03
41	GO:0003712: transcription cofactor activity	6.32E-03
42	GO:0030552: cAMP binding	6.32E-03
43	GO:0005216: ion channel activity	7.84E-03
44	GO:0035251: UDP-glucosyltransferase activity	8.38E-03
45	GO:0019706: protein-cysteine S-palmitoyltransferase activity	8.38E-03
46	GO:0008408: 3'-5' exonuclease activity	8.38E-03
47	GO:0016758: transferase activity, transferring hexosyl groups	8.41E-03
48	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.92E-03
49	GO:0004252: serine-type endopeptidase activity	9.59E-03
50	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.01E-02
51	GO:0005102: receptor binding	1.06E-02
52	GO:0030551: cyclic nucleotide binding	1.12E-02
53	GO:0005249: voltage-gated potassium channel activity	1.12E-02
54	GO:0004527: exonuclease activity	1.18E-02
55	GO:0010181: FMN binding	1.25E-02
56	GO:0008194: UDP-glycosyltransferase activity	1.34E-02
57	GO:0004197: cysteine-type endopeptidase activity	1.44E-02
58	GO:0000156: phosphorelay response regulator activity	1.51E-02
59	GO:0015385: sodium:proton antiporter activity	1.51E-02
60	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.64E-02
61	GO:0008237: metallopeptidase activity	1.64E-02
62	GO:0005200: structural constituent of cytoskeleton	1.64E-02
63	GO:0051213: dioxygenase activity	1.79E-02
64	GO:0004806: triglyceride lipase activity	2.00E-02
65	GO:0016757: transferase activity, transferring glycosyl groups	2.00E-02
66	GO:0043531: ADP binding	2.03E-02
67	GO:0015238: drug transmembrane transporter activity	2.23E-02
68	GO:0004222: metalloendopeptidase activity	2.31E-02
69	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.55E-02
70	GO:0016301: kinase activity	2.65E-02
71	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.72E-02
72	GO:0050661: NADP binding	2.80E-02
73	GO:0005198: structural molecule activity	3.32E-02
74	GO:0051287: NAD binding	3.50E-02
75	GO:0004674: protein serine/threonine kinase activity	3.70E-02
76	GO:0016298: lipase activity	3.87E-02
77	GO:0008234: cysteine-type peptidase activity	4.06E-02
78	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.55E-02
79	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.55E-02
80	GO:0022857: transmembrane transporter activity	4.65E-02
81	GO:0016491: oxidoreductase activity	4.87E-02