GO Enrichment Analysis of Co-expressed Genes with
AT3G55170
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 4 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 5 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 6 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 7 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 8 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 9 | GO:0015843: methylammonium transport | 0.00E+00 |
| 10 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 11 | GO:0046620: regulation of organ growth | 6.06E-12 |
| 12 | GO:0009733: response to auxin | 8.42E-09 |
| 13 | GO:0009734: auxin-activated signaling pathway | 1.36E-08 |
| 14 | GO:0040008: regulation of growth | 4.60E-07 |
| 15 | GO:0009926: auxin polar transport | 2.35E-06 |
| 16 | GO:0009657: plastid organization | 1.75E-05 |
| 17 | GO:0046739: transport of virus in multicellular host | 4.45E-05 |
| 18 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 5.84E-05 |
| 19 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 3.57E-04 |
| 20 | GO:0042659: regulation of cell fate specification | 3.57E-04 |
| 21 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 3.57E-04 |
| 22 | GO:0090558: plant epidermis development | 3.57E-04 |
| 23 | GO:0051418: microtubule nucleation by microtubule organizing center | 3.57E-04 |
| 24 | GO:0070509: calcium ion import | 3.57E-04 |
| 25 | GO:0010480: microsporocyte differentiation | 3.57E-04 |
| 26 | GO:0035987: endodermal cell differentiation | 3.57E-04 |
| 27 | GO:0006436: tryptophanyl-tRNA aminoacylation | 3.57E-04 |
| 28 | GO:0034080: CENP-A containing nucleosome assembly | 3.57E-04 |
| 29 | GO:0000066: mitochondrial ornithine transport | 3.57E-04 |
| 30 | GO:0010497: plasmodesmata-mediated intercellular transport | 4.81E-04 |
| 31 | GO:0000373: Group II intron splicing | 5.76E-04 |
| 32 | GO:0033566: gamma-tubulin complex localization | 7.77E-04 |
| 33 | GO:0060359: response to ammonium ion | 7.77E-04 |
| 34 | GO:0070981: L-asparagine biosynthetic process | 7.77E-04 |
| 35 | GO:0071497: cellular response to freezing | 7.77E-04 |
| 36 | GO:0006529: asparagine biosynthetic process | 7.77E-04 |
| 37 | GO:2000123: positive regulation of stomatal complex development | 7.77E-04 |
| 38 | GO:0090708: specification of plant organ axis polarity | 1.26E-03 |
| 39 | GO:0006954: inflammatory response | 1.26E-03 |
| 40 | GO:0010623: programmed cell death involved in cell development | 1.26E-03 |
| 41 | GO:0006760: folic acid-containing compound metabolic process | 1.26E-03 |
| 42 | GO:0043157: response to cation stress | 1.26E-03 |
| 43 | GO:0007052: mitotic spindle organization | 1.26E-03 |
| 44 | GO:0045910: negative regulation of DNA recombination | 1.26E-03 |
| 45 | GO:0010207: photosystem II assembly | 1.33E-03 |
| 46 | GO:0070588: calcium ion transmembrane transport | 1.49E-03 |
| 47 | GO:0007275: multicellular organism development | 1.63E-03 |
| 48 | GO:0044211: CTP salvage | 1.81E-03 |
| 49 | GO:0019048: modulation by virus of host morphology or physiology | 1.81E-03 |
| 50 | GO:0090307: mitotic spindle assembly | 1.81E-03 |
| 51 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.81E-03 |
| 52 | GO:0031048: chromatin silencing by small RNA | 1.81E-03 |
| 53 | GO:0015696: ammonium transport | 1.81E-03 |
| 54 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 1.81E-03 |
| 55 | GO:0032981: mitochondrial respiratory chain complex I assembly | 1.81E-03 |
| 56 | GO:2000904: regulation of starch metabolic process | 1.81E-03 |
| 57 | GO:0043572: plastid fission | 1.81E-03 |
| 58 | GO:0034508: centromere complex assembly | 1.81E-03 |
| 59 | GO:1902476: chloride transmembrane transport | 1.81E-03 |
| 60 | GO:0051513: regulation of monopolar cell growth | 1.81E-03 |
| 61 | GO:0007231: osmosensory signaling pathway | 1.81E-03 |
| 62 | GO:0072488: ammonium transmembrane transport | 2.44E-03 |
| 63 | GO:0030104: water homeostasis | 2.44E-03 |
| 64 | GO:0033500: carbohydrate homeostasis | 2.44E-03 |
| 65 | GO:0051567: histone H3-K9 methylation | 2.44E-03 |
| 66 | GO:0010508: positive regulation of autophagy | 2.44E-03 |
| 67 | GO:2000038: regulation of stomatal complex development | 2.44E-03 |
| 68 | GO:0046656: folic acid biosynthetic process | 2.44E-03 |
| 69 | GO:0044206: UMP salvage | 2.44E-03 |
| 70 | GO:1901141: regulation of lignin biosynthetic process | 2.44E-03 |
| 71 | GO:0006479: protein methylation | 2.44E-03 |
| 72 | GO:0010158: abaxial cell fate specification | 3.11E-03 |
| 73 | GO:0010375: stomatal complex patterning | 3.11E-03 |
| 74 | GO:0009107: lipoate biosynthetic process | 3.11E-03 |
| 75 | GO:1902183: regulation of shoot apical meristem development | 3.11E-03 |
| 76 | GO:0016123: xanthophyll biosynthetic process | 3.11E-03 |
| 77 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.85E-03 |
| 78 | GO:0006206: pyrimidine nucleobase metabolic process | 3.85E-03 |
| 79 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.85E-03 |
| 80 | GO:0009228: thiamine biosynthetic process | 3.85E-03 |
| 81 | GO:0016458: gene silencing | 3.85E-03 |
| 82 | GO:0010405: arabinogalactan protein metabolic process | 3.85E-03 |
| 83 | GO:0009959: negative gravitropism | 3.85E-03 |
| 84 | GO:0009658: chloroplast organization | 4.22E-03 |
| 85 | GO:0017148: negative regulation of translation | 4.64E-03 |
| 86 | GO:0009942: longitudinal axis specification | 4.64E-03 |
| 87 | GO:0046654: tetrahydrofolate biosynthetic process | 4.64E-03 |
| 88 | GO:0030488: tRNA methylation | 4.64E-03 |
| 89 | GO:0080086: stamen filament development | 4.64E-03 |
| 90 | GO:2000067: regulation of root morphogenesis | 4.64E-03 |
| 91 | GO:0032502: developmental process | 4.81E-03 |
| 92 | GO:0010252: auxin homeostasis | 5.46E-03 |
| 93 | GO:0010050: vegetative phase change | 5.48E-03 |
| 94 | GO:0048437: floral organ development | 5.48E-03 |
| 95 | GO:0006821: chloride transport | 5.48E-03 |
| 96 | GO:0030307: positive regulation of cell growth | 5.48E-03 |
| 97 | GO:0048528: post-embryonic root development | 5.48E-03 |
| 98 | GO:0009742: brassinosteroid mediated signaling pathway | 5.54E-03 |
| 99 | GO:0080167: response to karrikin | 5.85E-03 |
| 100 | GO:0051607: defense response to virus | 6.15E-03 |
| 101 | GO:0048564: photosystem I assembly | 6.37E-03 |
| 102 | GO:0001522: pseudouridine synthesis | 6.37E-03 |
| 103 | GO:0042255: ribosome assembly | 6.37E-03 |
| 104 | GO:0006353: DNA-templated transcription, termination | 6.37E-03 |
| 105 | GO:0009850: auxin metabolic process | 6.37E-03 |
| 106 | GO:0070413: trehalose metabolism in response to stress | 6.37E-03 |
| 107 | GO:0055075: potassium ion homeostasis | 6.37E-03 |
| 108 | GO:0009827: plant-type cell wall modification | 7.30E-03 |
| 109 | GO:0007389: pattern specification process | 7.30E-03 |
| 110 | GO:0010411: xyloglucan metabolic process | 7.67E-03 |
| 111 | GO:0006098: pentose-phosphate shunt | 8.29E-03 |
| 112 | GO:2000024: regulation of leaf development | 8.29E-03 |
| 113 | GO:0000902: cell morphogenesis | 8.29E-03 |
| 114 | GO:0006412: translation | 8.31E-03 |
| 115 | GO:0009638: phototropism | 9.31E-03 |
| 116 | GO:2000280: regulation of root development | 9.31E-03 |
| 117 | GO:0030422: production of siRNA involved in RNA interference | 1.04E-02 |
| 118 | GO:0009641: shade avoidance | 1.04E-02 |
| 119 | GO:0006298: mismatch repair | 1.04E-02 |
| 120 | GO:0006949: syncytium formation | 1.04E-02 |
| 121 | GO:0006259: DNA metabolic process | 1.04E-02 |
| 122 | GO:0006816: calcium ion transport | 1.15E-02 |
| 123 | GO:0009773: photosynthetic electron transport in photosystem I | 1.15E-02 |
| 124 | GO:0006265: DNA topological change | 1.15E-02 |
| 125 | GO:0048229: gametophyte development | 1.15E-02 |
| 126 | GO:0010015: root morphogenesis | 1.15E-02 |
| 127 | GO:0006839: mitochondrial transport | 1.23E-02 |
| 128 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.27E-02 |
| 129 | GO:0045037: protein import into chloroplast stroma | 1.27E-02 |
| 130 | GO:0010582: floral meristem determinacy | 1.27E-02 |
| 131 | GO:2000012: regulation of auxin polar transport | 1.39E-02 |
| 132 | GO:0009785: blue light signaling pathway | 1.39E-02 |
| 133 | GO:0010628: positive regulation of gene expression | 1.39E-02 |
| 134 | GO:0010075: regulation of meristem growth | 1.39E-02 |
| 135 | GO:0006094: gluconeogenesis | 1.39E-02 |
| 136 | GO:0042546: cell wall biogenesis | 1.45E-02 |
| 137 | GO:0006541: glutamine metabolic process | 1.51E-02 |
| 138 | GO:0010020: chloroplast fission | 1.51E-02 |
| 139 | GO:0009934: regulation of meristem structural organization | 1.51E-02 |
| 140 | GO:0000162: tryptophan biosynthetic process | 1.77E-02 |
| 141 | GO:0006833: water transport | 1.77E-02 |
| 142 | GO:0000027: ribosomal large subunit assembly | 1.90E-02 |
| 143 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.90E-02 |
| 144 | GO:0030150: protein import into mitochondrial matrix | 1.90E-02 |
| 145 | GO:0005992: trehalose biosynthetic process | 1.90E-02 |
| 146 | GO:0006418: tRNA aminoacylation for protein translation | 2.04E-02 |
| 147 | GO:0051302: regulation of cell division | 2.04E-02 |
| 148 | GO:0006306: DNA methylation | 2.18E-02 |
| 149 | GO:0016998: cell wall macromolecule catabolic process | 2.18E-02 |
| 150 | GO:0048316: seed development | 2.31E-02 |
| 151 | GO:0006468: protein phosphorylation | 2.32E-02 |
| 152 | GO:0006730: one-carbon metabolic process | 2.33E-02 |
| 153 | GO:0031348: negative regulation of defense response | 2.33E-02 |
| 154 | GO:0010082: regulation of root meristem growth | 2.48E-02 |
| 155 | GO:0071555: cell wall organization | 2.53E-02 |
| 156 | GO:0010089: xylem development | 2.63E-02 |
| 157 | GO:0048653: anther development | 2.95E-02 |
| 158 | GO:0000226: microtubule cytoskeleton organization | 2.95E-02 |
| 159 | GO:0008033: tRNA processing | 2.95E-02 |
| 160 | GO:0006662: glycerol ether metabolic process | 3.11E-02 |
| 161 | GO:0048868: pollen tube development | 3.11E-02 |
| 162 | GO:0006342: chromatin silencing | 3.11E-02 |
| 163 | GO:0009741: response to brassinosteroid | 3.11E-02 |
| 164 | GO:0048544: recognition of pollen | 3.27E-02 |
| 165 | GO:0007059: chromosome segregation | 3.27E-02 |
| 166 | GO:0009646: response to absence of light | 3.27E-02 |
| 167 | GO:0008654: phospholipid biosynthetic process | 3.44E-02 |
| 168 | GO:0009851: auxin biosynthetic process | 3.44E-02 |
| 169 | GO:0009058: biosynthetic process | 3.55E-02 |
| 170 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.61E-02 |
| 171 | GO:0002229: defense response to oomycetes | 3.61E-02 |
| 172 | GO:0010583: response to cyclopentenone | 3.78E-02 |
| 173 | GO:0009630: gravitropism | 3.78E-02 |
| 174 | GO:0009790: embryo development | 3.92E-02 |
| 175 | GO:0006464: cellular protein modification process | 4.14E-02 |
| 176 | GO:0009828: plant-type cell wall loosening | 4.14E-02 |
| 177 | GO:0007267: cell-cell signaling | 4.32E-02 |
| 178 | GO:0007623: circadian rhythm | 4.63E-02 |
| 179 | GO:0016310: phosphorylation | 4.69E-02 |
| 180 | GO:0001666: response to hypoxia | 4.69E-02 |
| 181 | GO:0010027: thylakoid membrane organization | 4.69E-02 |
| 182 | GO:0006810: transport | 4.76E-02 |
| 183 | GO:0009816: defense response to bacterium, incompatible interaction | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 2 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 3.57E-04 |
| 3 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 3.57E-04 |
| 4 | GO:0005290: L-histidine transmembrane transporter activity | 3.57E-04 |
| 5 | GO:0004071: aspartate-ammonia ligase activity | 3.57E-04 |
| 6 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.57E-04 |
| 7 | GO:0016274: protein-arginine N-methyltransferase activity | 3.57E-04 |
| 8 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.57E-04 |
| 9 | GO:0004830: tryptophan-tRNA ligase activity | 3.57E-04 |
| 10 | GO:0003735: structural constituent of ribosome | 5.93E-04 |
| 11 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 7.77E-04 |
| 12 | GO:0000064: L-ornithine transmembrane transporter activity | 7.77E-04 |
| 13 | GO:0004150: dihydroneopterin aldolase activity | 7.77E-04 |
| 14 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 7.77E-04 |
| 15 | GO:0017118: lipoyltransferase activity | 7.77E-04 |
| 16 | GO:0016415: octanoyltransferase activity | 7.77E-04 |
| 17 | GO:0005262: calcium channel activity | 1.18E-03 |
| 18 | GO:0070330: aromatase activity | 1.26E-03 |
| 19 | GO:0017150: tRNA dihydrouridine synthase activity | 1.26E-03 |
| 20 | GO:0070180: large ribosomal subunit rRNA binding | 1.26E-03 |
| 21 | GO:0015181: arginine transmembrane transporter activity | 1.81E-03 |
| 22 | GO:0035197: siRNA binding | 1.81E-03 |
| 23 | GO:0043023: ribosomal large subunit binding | 1.81E-03 |
| 24 | GO:0015189: L-lysine transmembrane transporter activity | 1.81E-03 |
| 25 | GO:0043015: gamma-tubulin binding | 2.44E-03 |
| 26 | GO:0005253: anion channel activity | 2.44E-03 |
| 27 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.44E-03 |
| 28 | GO:0004834: tryptophan synthase activity | 2.44E-03 |
| 29 | GO:0004845: uracil phosphoribosyltransferase activity | 2.44E-03 |
| 30 | GO:0018685: alkane 1-monooxygenase activity | 3.11E-03 |
| 31 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 3.11E-03 |
| 32 | GO:0004332: fructose-bisphosphate aldolase activity | 3.85E-03 |
| 33 | GO:0008519: ammonium transmembrane transporter activity | 3.85E-03 |
| 34 | GO:0005247: voltage-gated chloride channel activity | 3.85E-03 |
| 35 | GO:0030983: mismatched DNA binding | 3.85E-03 |
| 36 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.85E-03 |
| 37 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.85E-03 |
| 38 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.50E-03 |
| 39 | GO:0008195: phosphatidate phosphatase activity | 4.64E-03 |
| 40 | GO:0004849: uridine kinase activity | 4.64E-03 |
| 41 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.64E-03 |
| 42 | GO:0019899: enzyme binding | 5.48E-03 |
| 43 | GO:0008173: RNA methyltransferase activity | 7.30E-03 |
| 44 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 7.30E-03 |
| 45 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.67E-03 |
| 46 | GO:0009672: auxin:proton symporter activity | 9.31E-03 |
| 47 | GO:0004805: trehalose-phosphatase activity | 1.04E-02 |
| 48 | GO:0008327: methyl-CpG binding | 1.15E-02 |
| 49 | GO:0042393: histone binding | 1.23E-02 |
| 50 | GO:0004521: endoribonuclease activity | 1.27E-02 |
| 51 | GO:0010329: auxin efflux transmembrane transporter activity | 1.39E-02 |
| 52 | GO:0015266: protein channel activity | 1.39E-02 |
| 53 | GO:0004089: carbonate dehydratase activity | 1.39E-02 |
| 54 | GO:0031072: heat shock protein binding | 1.39E-02 |
| 55 | GO:0009982: pseudouridine synthase activity | 1.39E-02 |
| 56 | GO:0043621: protein self-association | 1.51E-02 |
| 57 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.51E-02 |
| 58 | GO:0031418: L-ascorbic acid binding | 1.90E-02 |
| 59 | GO:0005345: purine nucleobase transmembrane transporter activity | 2.04E-02 |
| 60 | GO:0004176: ATP-dependent peptidase activity | 2.18E-02 |
| 61 | GO:0033612: receptor serine/threonine kinase binding | 2.18E-02 |
| 62 | GO:0008408: 3'-5' exonuclease activity | 2.18E-02 |
| 63 | GO:0004650: polygalacturonase activity | 2.46E-02 |
| 64 | GO:0003727: single-stranded RNA binding | 2.63E-02 |
| 65 | GO:0047134: protein-disulfide reductase activity | 2.79E-02 |
| 66 | GO:0004812: aminoacyl-tRNA ligase activity | 2.79E-02 |
| 67 | GO:0008536: Ran GTPase binding | 3.11E-02 |
| 68 | GO:0004527: exonuclease activity | 3.11E-02 |
| 69 | GO:0004791: thioredoxin-disulfide reductase activity | 3.27E-02 |
| 70 | GO:0019843: rRNA binding | 3.37E-02 |
| 71 | GO:0019901: protein kinase binding | 3.44E-02 |
| 72 | GO:0016829: lyase activity | 3.64E-02 |
| 73 | GO:0004674: protein serine/threonine kinase activity | 3.66E-02 |
| 74 | GO:0030246: carbohydrate binding | 3.85E-02 |
| 75 | GO:0000156: phosphorelay response regulator activity | 3.96E-02 |
| 76 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.96E-02 |
| 77 | GO:0003684: damaged DNA binding | 4.14E-02 |
| 78 | GO:0016791: phosphatase activity | 4.14E-02 |
| 79 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.32E-02 |
| 80 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.32E-02 |
| 81 | GO:0004672: protein kinase activity | 4.76E-02 |