Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G54690

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905499: trichome papilla formation0.00E+00
2GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation0.00E+00
3GO:0006869: lipid transport4.31E-06
4GO:0018298: protein-chromophore linkage1.80E-05
5GO:0042761: very long-chain fatty acid biosynthetic process2.74E-05
6GO:0051180: vitamin transport4.04E-05
7GO:0030974: thiamine pyrophosphate transport4.04E-05
8GO:0006637: acyl-CoA metabolic process4.04E-05
9GO:0048640: negative regulation of developmental growth4.04E-05
10GO:0019510: S-adenosylhomocysteine catabolic process4.04E-05
11GO:0010025: wax biosynthetic process8.11E-05
12GO:0015893: drug transport1.00E-04
13GO:0033353: S-adenosylmethionine cycle1.00E-04
14GO:0009695: jasmonic acid biosynthetic process1.02E-04
15GO:0009768: photosynthesis, light harvesting in photosystem I1.02E-04
16GO:0015714: phosphoenolpyruvate transport1.73E-04
17GO:0006081: cellular aldehyde metabolic process1.73E-04
18GO:0015713: phosphoglycerate transport3.43E-04
19GO:0009902: chloroplast relocation3.43E-04
20GO:0010023: proanthocyanidin biosynthetic process3.43E-04
21GO:0015689: molybdate ion transport3.43E-04
22GO:0006665: sphingolipid metabolic process4.37E-04
23GO:0010218: response to far red light5.04E-04
24GO:0006086: acetyl-CoA biosynthetic process from pyruvate5.37E-04
25GO:0009637: response to blue light5.76E-04
26GO:0009769: photosynthesis, light harvesting in photosystem II7.49E-04
27GO:0050829: defense response to Gram-negative bacterium7.49E-04
28GO:0009645: response to low light intensity stimulus7.49E-04
29GO:0009644: response to high light intensity7.93E-04
30GO:0019827: stem cell population maintenance8.61E-04
31GO:0009827: plant-type cell wall modification9.77E-04
32GO:0010100: negative regulation of photomorphogenesis9.77E-04
33GO:0071482: cellular response to light stimulus9.77E-04
34GO:0006857: oligopeptide transport1.04E-03
35GO:0009245: lipid A biosynthetic process1.10E-03
36GO:0034765: regulation of ion transmembrane transport1.10E-03
37GO:0009718: anthocyanin-containing compound biosynthetic process1.77E-03
38GO:0006633: fatty acid biosynthetic process2.12E-03
39GO:0051017: actin filament bundle assembly2.39E-03
40GO:0051302: regulation of cell division2.55E-03
41GO:0009269: response to desiccation2.72E-03
42GO:0031408: oxylipin biosynthetic process2.72E-03
43GO:0006730: one-carbon metabolic process2.89E-03
44GO:0030245: cellulose catabolic process2.89E-03
45GO:0010091: trichome branching3.24E-03
46GO:0042335: cuticle development3.61E-03
47GO:0042391: regulation of membrane potential3.61E-03
48GO:0045489: pectin biosynthetic process3.80E-03
49GO:0048868: pollen tube development3.80E-03
50GO:0015979: photosynthesis5.04E-03
51GO:0071805: potassium ion transmembrane transport5.21E-03
52GO:0042128: nitrate assimilation6.09E-03
53GO:0030244: cellulose biosynthetic process6.77E-03
54GO:0006810: transport7.00E-03
55GO:0000160: phosphorelay signal transduction system7.01E-03
56GO:0009834: plant-type secondary cell wall biogenesis7.25E-03
57GO:0016051: carbohydrate biosynthetic process7.99E-03
58GO:0006839: mitochondrial transport8.75E-03
59GO:0010114: response to red light9.53E-03
60GO:0009737: response to abscisic acid1.12E-02
61GO:0009585: red, far-red light phototransduction1.18E-02
62GO:0009736: cytokinin-activated signaling pathway1.18E-02
63GO:0006096: glycolytic process1.32E-02
64GO:0042545: cell wall modification1.48E-02
65GO:0006396: RNA processing1.54E-02
66GO:0045490: pectin catabolic process2.22E-02
67GO:0009739: response to gibberellin2.41E-02
68GO:0009723: response to ethylene3.37E-02
69GO:0080167: response to karrikin3.54E-02
70GO:0010200: response to chitin3.63E-02
71GO:0045454: cell redox homeostasis4.02E-02
72GO:0016042: lipid catabolic process4.57E-02
73GO:0007275: multicellular organism development4.60E-02
74GO:0009751: response to salicylic acid4.62E-02
75GO:0006281: DNA repair4.67E-02
76GO:0006629: lipid metabolic process4.67E-02
77GO:0055114: oxidation-reduction process4.75E-02
78GO:0009753: response to jasmonic acid4.90E-02
RankGO TermAdjusted P value
1GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity0.00E+00
2GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
3GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity0.00E+00
4GO:0015121: phosphoenolpyruvate:phosphate antiporter activity4.04E-05
5GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity4.04E-05
6GO:0004321: fatty-acyl-CoA synthase activity4.04E-05
7GO:0090422: thiamine pyrophosphate transporter activity4.04E-05
8GO:0004013: adenosylhomocysteinase activity4.04E-05
9GO:0031409: pigment binding8.11E-05
10GO:0004802: transketolase activity1.00E-04
11GO:0008289: lipid binding1.69E-04
12GO:0003913: DNA photolyase activity1.73E-04
13GO:0046423: allene-oxide cyclase activity1.73E-04
14GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.73E-04
15GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.55E-04
16GO:0015098: molybdate ion transmembrane transporter activity3.43E-04
17GO:0015120: phosphoglycerate transmembrane transporter activity3.43E-04
18GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity3.43E-04
19GO:0016168: chlorophyll binding3.73E-04
20GO:0009922: fatty acid elongase activity4.37E-04
21GO:0047714: galactolipase activity5.37E-04
22GO:0004029: aldehyde dehydrogenase (NAD) activity5.37E-04
23GO:0031177: phosphopantetheine binding5.37E-04
24GO:0000035: acyl binding6.40E-04
25GO:0005242: inward rectifier potassium channel activity6.40E-04
26GO:0009881: photoreceptor activity7.49E-04
27GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process8.61E-04
28GO:0005215: transporter activity8.82E-04
29GO:0008970: phosphatidylcholine 1-acylhydrolase activity9.77E-04
30GO:0016207: 4-coumarate-CoA ligase activity1.10E-03
31GO:0000989: transcription factor activity, transcription factor binding1.10E-03
32GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.10E-03
33GO:0047617: acyl-CoA hydrolase activity1.22E-03
34GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.22E-03
35GO:0015020: glucuronosyltransferase activity1.35E-03
36GO:0019904: protein domain specific binding1.49E-03
37GO:0004565: beta-galactosidase activity1.77E-03
38GO:0004725: protein tyrosine phosphatase activity2.23E-03
39GO:0003954: NADH dehydrogenase activity2.39E-03
40GO:0042802: identical protein binding2.94E-03
41GO:0008810: cellulase activity3.06E-03
42GO:0030551: cyclic nucleotide binding3.61E-03
43GO:0005249: voltage-gated potassium channel activity3.61E-03
44GO:0008080: N-acetyltransferase activity3.80E-03
45GO:0010181: FMN binding3.99E-03
46GO:0048038: quinone binding4.38E-03
47GO:0000156: phosphorelay response regulator activity4.79E-03
48GO:0016413: O-acetyltransferase activity5.42E-03
49GO:0008375: acetylglucosaminyltransferase activity6.09E-03
50GO:0004806: triglyceride lipase activity6.31E-03
51GO:0015293: symporter activity1.03E-02
52GO:0051287: NAD binding1.09E-02
53GO:0045330: aspartyl esterase activity1.26E-02
54GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.35E-02
55GO:0016874: ligase activity1.45E-02
56GO:0030599: pectinesterase activity1.45E-02
57GO:0015035: protein disulfide oxidoreductase activity1.54E-02
58GO:0046910: pectinesterase inhibitor activity2.12E-02
59GO:0015297: antiporter activity2.15E-02
60GO:0008194: UDP-glycosyltransferase activity2.41E-02
61GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.64E-02
62GO:0004871: signal transducer activity4.16E-02
63GO:0009055: electron carrier activity4.90E-02
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Gene type



Gene DE type