GO Enrichment Analysis of Co-expressed Genes with
AT3G53680
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0080127: fruit septum development | 0.00E+00 |
| 3 | GO:0019988: charged-tRNA amino acid modification | 0.00E+00 |
| 4 | GO:0090615: mitochondrial mRNA processing | 0.00E+00 |
| 5 | GO:0046620: regulation of organ growth | 2.02E-07 |
| 6 | GO:0009733: response to auxin | 9.32E-06 |
| 7 | GO:0009926: auxin polar transport | 1.09E-04 |
| 8 | GO:0080009: mRNA methylation | 1.62E-04 |
| 9 | GO:2000071: regulation of defense response by callose deposition | 1.62E-04 |
| 10 | GO:0010305: leaf vascular tissue pattern formation | 3.82E-04 |
| 11 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 3.98E-04 |
| 12 | GO:0080156: mitochondrial mRNA modification | 4.70E-04 |
| 13 | GO:0009734: auxin-activated signaling pathway | 5.10E-04 |
| 14 | GO:0040008: regulation of growth | 5.16E-04 |
| 15 | GO:0009956: radial pattern formation | 5.32E-04 |
| 16 | GO:1900864: mitochondrial RNA modification | 5.32E-04 |
| 17 | GO:0080110: sporopollenin biosynthetic process | 6.73E-04 |
| 18 | GO:0016131: brassinosteroid metabolic process | 6.73E-04 |
| 19 | GO:0009913: epidermal cell differentiation | 8.23E-04 |
| 20 | GO:0003006: developmental process involved in reproduction | 8.23E-04 |
| 21 | GO:0006014: D-ribose metabolic process | 8.23E-04 |
| 22 | GO:0046855: inositol phosphate dephosphorylation | 8.23E-04 |
| 23 | GO:0010019: chloroplast-nucleus signaling pathway | 9.79E-04 |
| 24 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 9.79E-04 |
| 25 | GO:0006401: RNA catabolic process | 1.14E-03 |
| 26 | GO:0034968: histone lysine methylation | 1.32E-03 |
| 27 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.32E-03 |
| 28 | GO:0042255: ribosome assembly | 1.32E-03 |
| 29 | GO:0006353: DNA-templated transcription, termination | 1.32E-03 |
| 30 | GO:0009827: plant-type cell wall modification | 1.50E-03 |
| 31 | GO:0048507: meristem development | 1.69E-03 |
| 32 | GO:1900865: chloroplast RNA modification | 1.89E-03 |
| 33 | GO:0048829: root cap development | 2.10E-03 |
| 34 | GO:0006949: syncytium formation | 2.10E-03 |
| 35 | GO:0048367: shoot system development | 2.25E-03 |
| 36 | GO:0048765: root hair cell differentiation | 2.31E-03 |
| 37 | GO:0046856: phosphatidylinositol dephosphorylation | 2.31E-03 |
| 38 | GO:0009682: induced systemic resistance | 2.31E-03 |
| 39 | GO:0010582: floral meristem determinacy | 2.53E-03 |
| 40 | GO:0010588: cotyledon vascular tissue pattern formation | 2.76E-03 |
| 41 | GO:0010540: basipetal auxin transport | 2.99E-03 |
| 42 | GO:0048467: gynoecium development | 2.99E-03 |
| 43 | GO:0009933: meristem structural organization | 2.99E-03 |
| 44 | GO:0009825: multidimensional cell growth | 3.23E-03 |
| 45 | GO:0080188: RNA-directed DNA methylation | 3.23E-03 |
| 46 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.48E-03 |
| 47 | GO:0080147: root hair cell development | 3.73E-03 |
| 48 | GO:0003333: amino acid transmembrane transport | 4.26E-03 |
| 49 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.53E-03 |
| 50 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.81E-03 |
| 51 | GO:0045893: positive regulation of transcription, DNA-templated | 4.90E-03 |
| 52 | GO:0010584: pollen exine formation | 5.09E-03 |
| 53 | GO:0006284: base-excision repair | 5.09E-03 |
| 54 | GO:0080022: primary root development | 5.68E-03 |
| 55 | GO:0008033: tRNA processing | 5.68E-03 |
| 56 | GO:0010087: phloem or xylem histogenesis | 5.68E-03 |
| 57 | GO:0010118: stomatal movement | 5.68E-03 |
| 58 | GO:0042335: cuticle development | 5.68E-03 |
| 59 | GO:0009741: response to brassinosteroid | 5.98E-03 |
| 60 | GO:0010268: brassinosteroid homeostasis | 5.98E-03 |
| 61 | GO:0048825: cotyledon development | 6.60E-03 |
| 62 | GO:0019252: starch biosynthetic process | 6.60E-03 |
| 63 | GO:0009658: chloroplast organization | 6.91E-03 |
| 64 | GO:0002229: defense response to oomycetes | 6.91E-03 |
| 65 | GO:0009828: plant-type cell wall loosening | 7.90E-03 |
| 66 | GO:0016311: dephosphorylation | 1.04E-02 |
| 67 | GO:0006811: ion transport | 1.15E-02 |
| 68 | GO:0006865: amino acid transport | 1.23E-02 |
| 69 | GO:0009867: jasmonic acid mediated signaling pathway | 1.27E-02 |
| 70 | GO:0006629: lipid metabolic process | 1.27E-02 |
| 71 | GO:0048364: root development | 1.32E-02 |
| 72 | GO:0009965: leaf morphogenesis | 1.65E-02 |
| 73 | GO:0031347: regulation of defense response | 1.74E-02 |
| 74 | GO:0009664: plant-type cell wall organization | 1.79E-02 |
| 75 | GO:0006364: rRNA processing | 1.88E-02 |
| 76 | GO:0006417: regulation of translation | 2.02E-02 |
| 77 | GO:0048316: seed development | 2.17E-02 |
| 78 | GO:0006355: regulation of transcription, DNA-templated | 2.23E-02 |
| 79 | GO:0009620: response to fungus | 2.26E-02 |
| 80 | GO:0009416: response to light stimulus | 2.26E-02 |
| 81 | GO:0009555: pollen development | 2.26E-02 |
| 82 | GO:0007275: multicellular organism development | 2.37E-02 |
| 83 | GO:0051726: regulation of cell cycle | 2.52E-02 |
| 84 | GO:0009845: seed germination | 3.00E-02 |
| 85 | GO:0008380: RNA splicing | 4.04E-02 |
| 86 | GO:0009826: unidimensional cell growth | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043399: tRNA A64-2'-O-ribosylphosphate transferase activity | 0.00E+00 |
| 2 | GO:0016763: transferase activity, transferring pentosyl groups | 0.00E+00 |
| 3 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 4 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 5 | GO:0008395: steroid hydroxylase activity | 6.74E-05 |
| 6 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 6.74E-05 |
| 7 | GO:0042389: omega-3 fatty acid desaturase activity | 1.62E-04 |
| 8 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 1.62E-04 |
| 9 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.62E-04 |
| 10 | GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity | 3.98E-04 |
| 11 | GO:0003723: RNA binding | 4.05E-04 |
| 12 | GO:0010328: auxin influx transmembrane transporter activity | 5.32E-04 |
| 13 | GO:0008725: DNA-3-methyladenine glycosylase activity | 6.73E-04 |
| 14 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 8.23E-04 |
| 15 | GO:0004747: ribokinase activity | 9.79E-04 |
| 16 | GO:0008865: fructokinase activity | 1.32E-03 |
| 17 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.50E-03 |
| 18 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 2.53E-03 |
| 19 | GO:0000175: 3'-5'-exoribonuclease activity | 2.76E-03 |
| 20 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.70E-03 |
| 21 | GO:0004540: ribonuclease activity | 4.26E-03 |
| 22 | GO:0003727: single-stranded RNA binding | 5.09E-03 |
| 23 | GO:0018024: histone-lysine N-methyltransferase activity | 5.38E-03 |
| 24 | GO:0050662: coenzyme binding | 6.28E-03 |
| 25 | GO:0019901: protein kinase binding | 6.60E-03 |
| 26 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 7.11E-03 |
| 27 | GO:0005200: structural constituent of cytoskeleton | 8.24E-03 |
| 28 | GO:0003677: DNA binding | 1.08E-02 |
| 29 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.15E-02 |
| 30 | GO:0004519: endonuclease activity | 1.38E-02 |
| 31 | GO:0043621: protein self-association | 1.61E-02 |
| 32 | GO:0015293: symporter activity | 1.65E-02 |
| 33 | GO:0008289: lipid binding | 1.77E-02 |
| 34 | GO:0003690: double-stranded DNA binding | 1.93E-02 |
| 35 | GO:0016298: lipase activity | 1.93E-02 |
| 36 | GO:0015171: amino acid transmembrane transporter activity | 2.02E-02 |
| 37 | GO:0003779: actin binding | 2.37E-02 |
| 38 | GO:0043565: sequence-specific DNA binding | 2.45E-02 |
| 39 | GO:0008026: ATP-dependent helicase activity | 2.52E-02 |
| 40 | GO:0016787: hydrolase activity | 2.64E-02 |
| 41 | GO:0019843: rRNA binding | 2.84E-02 |
| 42 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.89E-02 |
| 43 | GO:0004601: peroxidase activity | 4.86E-02 |